ID:

rno-mir-296

Coordinate:

chr3:172357490-172357567 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.0 -41.7 -41.7

Sense Strand Reads

GACTCCATCTGTGTGCACACAAAACAGCCTGTGTGGATGATGACAAGAAAGGACCTTTCTGGAGGGCCCCCCCTCAATCCTGTTGTGCTCGCTTCAGAGGGTTGGGTGGAGGCTCTCCTGAAGGTGTCTATAGAGCATCGCATGGTGAGTAGGCCTTTGTTGCTCTAGAGAATCCTTG
***********************************************...(((((((((.((((((((.((.(((((((((.(((.........)))))))))))).)).)))))))).))))).))))..***********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..............................................................AGGGCCCCCCCTCAATCCTGT............................................................................................... 21 0 1 950.00 950 703 246 1
.............................................................AAGGGCCCCCCCTCAATCCTGT............................................................................................... 22 1 1 483.00 483 4 479 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAA............................................................ 22 2 1 261.00 261 261 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCA............................................................ 22 1 1 136.00 136 136 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAA.......................................................... 24 2 1 99.00 99 99 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAA........................................................... 23 2 1 99.00 99 99 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCT.............................................................. 20 0 1 93.00 93 88 5 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCC............................................................ 22 0 1 91.00 91 79 12 0
................................................................................................GAGGGTTGGGTGGAGGCTCTC............................................................. 21 0 1 86.00 86 78 8 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAAA........................................................... 23 3 3 74.67 224 220 3 1
................................................................................................GAGGGTTGGGTGGAGGCTCTCT............................................................ 22 1 1 72.00 72 70 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAA......................................................... 25 2 1 67.00 67 67 0 0
..............................................................AGGGCCCCCCCTCAATCCTG................................................................................................ 20 0 1 65.00 65 41 24 0
..............................................................AGGGCCCCCCCTCAATCCTGTTGT............................................................................................ 24 0 1 50.00 50 48 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAT............................................................ 22 2 2 48.00 96 96 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAT......................................................... 25 3 1 47.00 47 45 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAAT........................................................... 23 2 1 43.00 43 43 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTT............................................................ 22 2 1 35.00 35 22 0 13
..............................................................AGGGCCCCCCCTCAATCCTGTAA............................................................................................. 23 2 1 34.00 34 34 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTA.............................................................................................. 22 1 1 29.00 29 27 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTAT.......................................................... 24 3 1 24.00 24 19 0 5
................................................................................................GAGGGTTGGGTGGAGGCTCTCAT........................................................... 23 1 1 24.00 24 24 0 0
..............................................................AGGGCCCCCCCTCAATCCTGA............................................................................................... 21 1 1 22.00 22 18 4 0
..............................................................AGGGCCCCCCCTCAATCCTGTT.............................................................................................. 22 0 1 21.00 21 20 1 0
...............................................................GGGCCCCCCCTCAATCCTGT............................................................................................... 20 0 1 20.00 20 19 1 0
.............................................................AAGGGCCCCCCCTCAATCCTGC............................................................................................... 22 2 1 19.00 19 1 18 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAT.......................................................... 24 3 3 18.67 56 56 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTTG............................................................................................. 23 0 1 18.00 18 17 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAAA........................................................ 26 2 1 17.00 17 17 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTA............................................................. 21 1 1 16.00 16 16 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCA........................................................... 23 1 1 15.00 15 14 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTAT......................................................... 25 2 1 14.00 14 14 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTAT........................................................... 23 2 1 13.00 13 13 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAAT........................................................ 26 3 1 12.00 12 12 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTAT............................................................................................. 23 2 1 12.00 12 12 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAT.......................................................... 24 2 1 12.00 12 11 1 0
..............................................................AGGGCCCCCCCTCAATCCTGTTGA............................................................................................ 24 1 1 11.00 11 11 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCT.............................................................. 19 0 1 11.00 11 9 2 0
..............................................................AGGGCCCCCCCTCAATCCT................................................................................................. 19 0 1 10.00 10 8 2 0
................................................................................................GAGGGTTGGGTGGAGGCTC............................................................... 19 0 1 10.00 10 8 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTTT......................................................... 25 2 1 10.00 10 10 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTT............................................................. 21 1 1 10.00 10 10 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCA............................................................ 21 1 1 9.00 9 9 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCAA.......................................................... 23 2 1 9.00 9 9 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTAA.......................................................... 24 3 3 8.33 25 25 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCGA.......................................................... 24 2 1 8.00 8 8 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTA.......................................................... 24 1 1 8.00 8 8 0 0
................................................................................................GAGGGTTGGGTGGAGGCT................................................................ 18 0 1 8.00 8 5 3 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCT........................................................... 23 0 1 8.00 8 8 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTCG.......................................................... 24 2 1 7.00 7 0 0 7
..............................................................AGGGCCCCACCTCAATCCTGT............................................................................................... 21 1 1 7.00 7 6 1 0
.................................................................................................AGGGTTGGGTGGAGGCTCTC............................................................. 20 0 1 7.00 7 7 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTT.......................................................... 24 1 1 7.00 7 6 1 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCC............................................................ 21 0 1 7.00 7 6 1 0
.............................................................AAGGGCCCCCCCTCAATCCTGTT.............................................................................................. 23 1 1 7.00 7 0 7 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTTT.......................................................... 24 2 1 6.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATT.......................................................... 24 2 1 6.00 6 4 2 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCTA.......................................................... 23 1 1 6.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTAAA......................................................... 25 3 2 6.00 12 10 0 2
................................................................................................GAGGGTTGGGTGGAGGCTCA.............................................................. 20 1 1 6.00 6 6 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCAAA......................................................... 24 2 1 6.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCG............................................................ 22 1 1 6.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAGT......................................................... 25 2 1 6.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAA.......................................................... 24 3 6 5.33 32 31 0 1
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTAA......................................................... 25 1 1 5.00 5 5 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGA........................................................... 23 2 1 5.00 5 5 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAC............................................................ 22 1 1 5.00 5 5 0 0
..............................................................AGGGCCCCCCCTCCATCCTGT............................................................................................... 21 1 1 5.00 5 5 0 0
..............................................................AGGGCCCCCCCTCAATCCTGC............................................................................................... 21 1 1 5.00 5 3 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAG.......................................................... 24 2 1 5.00 5 5 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTAA............................................................ 21 2 3 4.33 13 13 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTTT............................................................................................. 23 1 1 4.00 4 4 0 0
.............................................................AAGGGCCCCCCCTCAATCCTGTA.............................................................................................. 23 2 1 4.00 4 0 4 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTTTT.......................................................... 24 3 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAGA........................................................ 26 3 1 4.00 4 4 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCT............................................................ 21 1 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCG........................................................... 23 1 1 4.00 4 2 0 2
................................................................................................GAGGGTTGGGTGGAGGCTCTCTT........................................................... 23 1 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAG......................................................... 25 3 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAG............................................................ 22 2 5 4.00 20 20 0 0
..............................................................AGGGCCCCCCATCAATCCTGT............................................................................................... 21 1 1 4.00 4 4 0 0
..............................................................AGGGCCCCCCCTCAATCC.................................................................................................. 18 0 1 4.00 4 2 2 0
................................................................................................GAGGGTTGGGTGGAGGC................................................................. 17 0 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTTT........................................................... 23 2 1 4.00 4 4 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCA........................................................... 22 1 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGAAA......................................................... 25 3 1 4.00 4 4 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTAA........................................................... 23 3 5 3.80 19 19 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTA............................................................ 22 2 2 3.50 7 7 0 0
.............................................................AAGGGCCTCCCCTCAATCCTGT............................................................................................... 22 2 1 3.00 3 0 3 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCTAT......................................................... 24 2 1 3.00 3 3 0 0
.............................................................AAGGGCCCCCTCTCAATCCTGT............................................................................................... 22 2 1 3.00 3 1 2 0
..............................................................AGGGCCCCCACTCAATCCTGT............................................................................................... 21 1 1 3.00 3 1 2 0
................................................................GGCCCCCCCTCAATCCTGT............................................................................................... 19 0 1 3.00 3 3 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCTT.......................................................... 23 1 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTTA......................................................... 25 1 1 3.00 3 3 0 0
.............................................................AAGGGACCCCCCTCAATCCTGT............................................................................................... 22 2 1 3.00 3 0 3 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTAGT......................................................... 25 3 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCGTCAATCCTGT............................................................................................... 21 1 1 3.00 3 1 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTTA.......................................................... 24 2 1 3.00 3 3 0 0
..............................................................CGGGCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATAT......................................................... 25 3 1 3.00 3 3 0 0
...............................................................GGGCCCCCCCTCACTCCTGT............................................................................................... 20 1 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCCTCACTCCTGT............................................................................................... 21 1 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAATT.......................................................... 24 3 1 3.00 3 3 0 0
............................................AAGAAAGGACCTTTCTGG.................................................................................................................... 18 0 1 3.00 3 0 3 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCCAAT......................................................... 24 3 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTTTT......................................................... 25 3 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAAA......................................................... 25 3 2 3.00 6 6 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTTTG.......................................................... 24 2 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCTTCAATCCTGT............................................................................................... 21 1 1 3.00 3 2 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAAAT....................................................... 27 3 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTTA............................................................................................. 23 1 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTAAA............................................................................................ 24 3 1 3.00 3 3 0 0
..............................................................AGGGCCCCCCCACAATCCTGT............................................................................................... 21 1 1 3.00 3 2 0 1
.........................................................GGGGGAGGGCCCCCCCTCAATCCTGT............................................................................................... 26 3 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTATA........................................................ 26 2 1 3.00 3 3 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCATT......................................................... 25 3 2 2.50 5 5 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTATA........................................................... 23 3 5 2.20 11 11 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAAG........................................................... 23 3 6 2.17 13 13 0 0
..............................................................AGGGCCCCCCCTCAATCCTGCA.............................................................................................. 22 2 1 2.00 2 2 0 0
..........................................................TTGGAGGGCCCCCCCTCAATCCTGT............................................................................................... 25 1 1 2.00 2 2 0 0
..............................................................AGGGCCCCCCCTCAATCCTCG............................................................................................... 21 2 1 2.00 2 0 0 2
.............................................................AAGGGCCCCCCCTCAATCCTGTTGT............................................................................................ 25 1 1 2.00 2 1 1 0
..............................................................AGGGCCCCCCCTCAATCCTGTGT............................................................................................. 23 2 1 2.00 2 2 0 0
................................................................................................GAGGGTTTGGTGGAGGCTCTCAT........................................................... 23 2 1 2.00 2 2 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTA............................................................. 20 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCGAAT........................................................ 26 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGCGGAGGCTCTCC............................................................ 22 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTATAG.......................................................... 24 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATAG......................................................... 25 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTAAG.......................................................... 24 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTACA........................................................... 23 2 1 2.00 2 2 0 0
..............................................................AAGGCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 2.00 2 0 2 0
.............................................................AAGGGCCACCCCTCAATCCTGT............................................................................................... 22 2 1 2.00 2 0 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTTAG.......................................................... 24 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAAAAA....................................................... 27 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTA........................................................... 23 2 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGTT.......................................................... 24 2 1 2.00 2 0 2 0
.............................................................AATGGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 2.00 2 0 2 0
..................................................................................................GGGTTGGGTGGAGGCTCTCCTTT......................................................... 23 2 1 2.00 2 2 0 0
.................................................................................................AGGGTTGGGTGGAGGCTTT.............................................................. 19 1 1 2.00 2 2 0 0
.............................................................AAGGGCCCACCCTCAATCCTGT............................................................................................... 22 2 1 2.00 2 0 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAAAA........................................................ 26 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCATAA........................................................ 26 2 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCTATA......................................................... 25 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGCGGCTCTCC............................................................ 22 1 1 2.00 2 2 0 0
.............................................................AAGGGCCCCCCCTCAATCCTGA............................................................................................... 22 2 1 2.00 2 0 2 0
..................................................................................................GGGTTGGGTGGAGGCTCTCCAAA......................................................... 23 2 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTTTT........................................................ 26 3 1 2.00 2 1 1 0
..........................................................GTAGAGGGCCCCCCCTCAATCCT................................................................................................. 23 2 1 2.00 2 2 0 0
.............................................................AAGGGCCCCCACTCAATCCTGT............................................................................................... 22 2 1 2.00 2 0 2 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCAT........................................................... 22 1 1 2.00 2 2 0 0
..............................................................AGGGCCCCCCCTCTATCCTGT............................................................................................... 21 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTAAA........................................................ 26 1 1 2.00 2 2 0 0
..............................................................AGGGCCCACCCTCAATCCTGT............................................................................................... 21 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCGAA......................................................... 25 2 1 2.00 2 2 0 0
...............................................................GGGCCCCCCCTCAATCCTGTTG............................................................................................. 22 0 1 2.00 2 2 0 0
..............................................................AGTGCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 2.00 2 0 2 0
.............................................................AGGGGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 2.00 2 0 2 0
..............................................................AGGGCCCCCCCTCAATACTGT............................................................................................... 21 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAAAG.......................................................... 24 3 1 2.00 2 2 0 0
.............................................................TAGGGCCCCCCCTCAATCCTGT............................................................................................... 22 1 1 2.00 2 0 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTAAGA......................................................... 25 3 1 2.00 2 2 0 0
...........................................................GGAAGGGCCCCCCCTCAATCCTGTTG............................................................................................. 26 2 1 2.00 2 2 0 0
..................................................................................................GGGTTGGGTGGAGGCTCT.............................................................. 18 0 1 2.00 2 2 0 0
..............................................................AGGGCTCCCCCTCAATCCTGT............................................................................................... 21 1 1 2.00 2 0 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTAAT........................................................ 26 2 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAG.......................................................... 24 1 1 2.00 2 2 0 0
................................................................................................GAGGGGTGGGTGGAGGCTCT.............................................................. 20 1 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCAAA............................................................ 22 3 20 2.00 40 40 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCATAAT....................................................... 27 3 1 2.00 2 2 0 0
................................................................................................GAGGGTTGGGTGGAGGCTATA............................................................. 21 2 5 1.80 9 9 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTTA........................................................... 23 3 5 1.80 9 9 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTGA............................................................ 22 2 4 1.75 7 6 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAG........................................................... 23 2 2 1.50 3 3 0 0
..............................................................AGGGCACCCCCTCAATCCTGT............................................................................................... 21 1 2 1.50 3 1 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTATTT.......................................................... 24 3 3 1.33 4 4 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCAA........................................................... 22 2 3 1.33 4 4 0 0
................................................................................................GAGGGTTGGTTGGAGGCTC............................................................... 19 1 3 1.33 4 4 0 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCTAT.......................................................... 23 3 4 1.25 5 5 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAGA.......................................................... 24 3 11 1.09 12 12 0 0
................................................................................................GATGGTTGGGTGGAGGCTCTC............................................................. 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGAA.......................................................... 24 3 3 1.00 3 3 0 0
................................................................................................GACGGTTGGGTGGCGGCTCTCC............................................................ 22 2 1 1.00 1 1 0 0
.............................................................AAGGTCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
..............................................................AGGGTCCCCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
..............................................................AGGGCCCCCCCTCAATCCTAT............................................................................................... 21 1 1 1.00 1 0 1 0
..............................................................CGGGCCCCCCCTCAATCCTGTTGT............................................................................................ 24 1 1 1.00 1 1 0 0
.............................................................................................AAAGAGGGTTGGGTGGAGGCTCTCA............................................................ 25 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGCGGCTCTCCTA.......................................................... 24 2 1 1.00 1 1 0 0
................................................................................................GAGGGATGGGTGGAGGCTCTCTT........................................................... 23 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCCATCCTGTTG............................................................................................. 23 1 1 1.00 1 1 0 0
..............................................................AGGGCCACCCCTCAATCCTGTTGT............................................................................................ 24 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAAT.................................................................................................... 16 0 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATAC......................................................... 25 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGT........................................................... 23 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTC................................................................................................ 20 1 1 1.00 1 0 1 0
.................................................................................................AGGGTTGGGTGAAGGCTCTCCTAAT........................................................ 25 3 1 1.00 1 1 0 0
..............................................................AGGGCCCCCGCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTACT........................................................... 23 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAAGCTCTCC............................................................ 22 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTATCCTAT......................................................... 25 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATA.......................................................... 24 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCTTGTTGT............................................................................................ 24 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTACAT.......................................................... 24 3 2 1.00 2 2 0 0
...............................................................................................AGAGGGTTGGGTGGAGGCTCTCAAT.......................................................... 25 3 1 1.00 1 0 1 0
................................................................................................GTGGGTTGGGTGGAGGCTCTCC............................................................ 22 1 1 1.00 1 0 1 0
...........................................................GGGAGGGCCCCCCCTCAATCCTGTTGT............................................................................................ 27 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCCCAATCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAGTCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
...............................................................................................AGAGGGTTGGGTGGAGGCTCTAA............................................................ 23 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCACTCCTGTAA............................................................................................. 23 3 1 1.00 1 1 0 0
...............................................................GGGCCCCCCCTCAATCCTGG............................................................................................... 20 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGCGGAGGCTCT.............................................................. 20 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCATTCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCACA......................................................... 25 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTATTGG.......................................................................................... 26 3 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCATGTAA............................................................................................. 23 3 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCACAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
.................................................................................................AGGGTGGGGTGGAGGCTCTCCAGA......................................................... 24 2 1 1.00 1 1 0 0
..............................................................TGGGCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
................................................................................................GACGGTTGGGTGGAGGCTCT.............................................................. 20 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTTTA............................................................................................ 24 2 1 1.00 1 1 0 0
.............................................AGAAAGGACCTTTCTGG.................................................................................................................... 17 0 2 1.00 2 0 2 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCATA......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATAA......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTCGAGGCTCTC............................................................. 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGCGGAGGCTCTCCTAA......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGATCTCCT........................................................... 23 1 1 1.00 1 1 0 0
.............................................................AAGGGCTCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
.............................................................AAGGGCCCCCCCTCAATCCTG................................................................................................ 21 1 1 1.00 1 0 1 0
..............................................................AGGGCCCCCCCTCAATCCTGTTGTT........................................................................................... 25 1 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCAATCCTGTTGA............................................................................................ 25 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTAATG.......................................................... 24 2 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCAATCCTCT............................................................................................... 22 2 1 1.00 1 0 1 0
...............................................................................................AGAGGGTTGGGTGGAGGCTCTCAT........................................................... 24 1 1 1.00 1 1 0 0
................................................................................................GCGGGTTGGGTGGAGGCTCTCC............................................................ 22 1 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCCATCCTGT............................................................................................... 22 2 2 1.00 2 0 2 0
................................................................................................GAGGGCTGGGTGGAGGCTCTCC............................................................ 22 1 1 1.00 1 1 0 0
.............................................................AAGTGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
..............................................................AGGCCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTAGAGGCTCTCCAA.......................................................... 24 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCAGA......................................................... 25 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGATCTCCAAA......................................................... 25 3 1 1.00 1 1 0 0
...............................................................GGGCCCCCCCTCAATCCTGTAA............................................................................................. 22 2 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCAATCCTGTTA............................................................................................. 24 2 1 1.00 1 0 1 0
.............................................................AAGGGCCCCACCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATTT......................................................... 25 3 1 1.00 1 1 0 0
..............................................................AGGTCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
..............................................................AGGGCCCCCCCTCAATCCTT................................................................................................ 20 1 1 1.00 1 0 1 0
..............................................................AGGACCCCCCCTCAATCCTGA............................................................................................... 21 2 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCGCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
.............................................................AAGGGCCCCCCCTCAATCCTGTAA............................................................................................. 24 3 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGTGGCTCT.............................................................. 20 1 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCAATCCTGTTT............................................................................................. 24 2 1 1.00 1 0 1 0
..................................................................................................GGGTTGGGTGGAGGCTCTCC............................................................ 20 0 1 1.00 1 1 0 0
...............................................................GGGCCCCCCCTCAATCCTGTACG............................................................................................ 23 3 1 1.00 1 0 0 1
..............................................................AGGGCCCCCCCTCAATCCTGTTGTA........................................................................................... 25 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGAAAA........................................................ 26 3 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAACCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTTAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
.................................................................................................AGGGTTGGGTGGAGGCTCTCATT.......................................................... 23 2 1 1.00 1 1 0 0
..............................................................AAGGGCCCCCCTCAATCCTGT............................................................................................... 21 2 2 1.00 2 0 2 0
...........................................................AAAAGGGCCCCCCCTCAATCCTGT............................................................................................... 24 3 1 1.00 1 1 0 0
................................................................................................GAGGGGTGGGTGGAGGCTCTCCA........................................................... 23 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGAA.............................................................................................. 22 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGATGCTCTCCAA.......................................................... 24 3 2 1.00 2 2 0 0
...............................................................................................AGAGGGTTGGGTGGAGGCTCTCCAAAAA....................................................... 28 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTCA........................................................... 23 2 1 1.00 1 1 0 0
..............................................................ACGGCCCCCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
.................................................................................................ATGGTTGGGTGGAGGCTCTCC............................................................ 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCTATAGT...................................................... 28 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCGG........................................................... 23 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTACG........................................................... 23 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGG............................................................................................... 21 1 1 1.00 1 0 1 0
.............................................................AAAGGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGCGGCTCTCCTAAA........................................................ 26 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCAG................................................................................................ 20 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCATATA........................................................ 26 3 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCAAGA......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCTTGT........................................................... 23 2 1 1.00 1 1 0 0
..........................................................TTGGAGGGCCCCCCCTCAATCCTGTTG............................................................................................. 27 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTCGG............................................................................................ 24 2 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTAGAGGCTCTCCC........................................................... 23 2 1 1.00 1 0 0 1
................................................................................................GAGCGTTGGGTGGAGGCTCTCCAA.......................................................... 24 3 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTAAATCCTGT............................................................................................... 21 1 1 1.00 1 0 1 0
...............................................................AGGCCCCCCCTCAATCCTGT............................................................................................... 20 1 1 1.00 1 0 1 0
..............................................................AGGGCCACCCCTCAATCCTGT............................................................................................... 21 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGTGGAGGCTCCCC............................................................ 22 1 1 1.00 1 1 0 0
.............................................................ATGGGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
................................................................................................GAGGGTTGGGTGGAGGCTCTCCACAT........................................................ 26 3 1 1.00 1 1 0 0
.............................................................ACGGGCCCCCCCTCAATCCTGT............................................................................................... 22 2 1 1.00 1 0 1 0
..............................................................AGGGCCCCCCCCCAATCCTG................................................................................................ 20 1 1 1.00 1 1 0 0
...............................................................GGGCCCCCCCCCAATCCTGT............................................................................................... 20 1 1 1.00 1 1 0 0
................................................................................................TAGGGTTGGGTGGAGGCTCTCCAGT......................................................... 25 3 1 1.00 1 1 0 0
.............................................................AAGGGCCCCCCCTCACTCCTGT............................................................................................... 22 2 2 1.00 2 0 2 0
..............................................................AGGGCCCCCCCTCAATCCTGTC.............................................................................................. 22 1 1 1.00 1 1 0 0
................................................................................................GAGGGTTGGGAGGAGGCTCTCC............................................................ 22 1 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTGA............................................................................................. 23 2 1 1.00 1 1 0 0
..............................................................AGGGCCCCCCCTCAATCCTGTTGG............................................................................................ 24 1 1 1.00 1 1 0 0
...............................................................................................AGAGGGTTGGGTGGAGGCTCTTT............................................................ 23 2 1 1.00 1 1 0 0

Anti-sense strand reads

CTGAGGTAGACACACGTGTGTTTTGTCGGACACACCTACTACTGTTCTTTCCTGGAAAGACCTCCCGGGGGGGAGTTAGGACAACACGAGCGAAGTCTCCCAACCCACCTCCGAGAGGACTTCCACAGATATCTCGTAGCGTACCACTCATCCGGAAACAACGAGATCTCTTAGGAAC
***********************************************...(((((((((.((((((((.((.(((((((((.(((.........)))))))))))).)).)))))))).))))).))))..***********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:43 PM