ID:

rno-mir-293

 Coordinate:

chr1:64537107-64537178 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.5 -34.1

Sense Strand Reads

AACCTGCATGCCTGGCTATAAGCTAGAAACTTATTTGCAAGTGTTTCCACCTGTGATACTCAAACTGTGTGACACTTTGTTTCTTTTGGAAGAAGTGCCGCAAAGTTTGCAGTGTTACCGATGGAGAAAACTGCAGTTAGGGGGCTGTGTGGCTACTCACCTGGTGGCACTC
******************************************.((((((...((((((((((((((.((((.((((((.((((....)))))))))).)))).)))))).))))))))...))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
.........................................................ACTCAAACTGTGTGACACTTT.............................................................................................. 21 0 1 30.00 30 28 2
.............................................................................................AGTGCCGCAAAGTTTGCAGTGT......................................................... 22 0 1 16.00 16 16 0
.........................................................ACTCAAACTGTGTGACACTT............................................................................................... 20 0 1 4.00 4 4 0
..............................................................................................GTGCCGCAAAGTTTGCAGTGT......................................................... 21 0 1 3.00 3 2 1
.............................................................................................AGTGCCGCAAAGTTTGCAGTGTT........................................................ 23 0 1 2.00 2 2 0
.............................................................................................AGTGCCGCAAAGTTTGCAGTGTA........................................................ 23 1 1 2.00 2 2 0
.........................................................ACCCAAACTGTGTGACACTTT.............................................................................................. 21 1 1 1.00 1 1 0
.........................................................ACTCAAACTGTGTAACACTTT.............................................................................................. 21 1 1 1.00 1 1 0
.........................................................ACTCAAACTGTGTGCCACTT............................................................................................... 20 1 1 1.00 1 1 0
.........................................................ACTCAAACTGTGTGACACTTTGTTT.......................................................................................... 25 0 1 1.00 1 1 0
.........................................................ACTCAAACAGTGTGACACTTT.............................................................................................. 21 1 1 1.00 1 1 0
.............................................................................................AGTGCCGCAAAGCTTGCAGTGT......................................................... 22 1 1 1.00 1 1 0
.............................................................................................AGGGCCGCAAAGTTTGCAGTGT......................................................... 22 1 1 1.00 1 1 0
.............................................................................................AGTGCCGCAAAGTTTGCAGTG.......................................................... 21 0 1 1.00 1 1 0
.............................................................................................AGTGCCGCAAAGTTTGCA............................................................. 18 0 1 1.00 1 0 1
.........................................................ACTCAAACTGTGTGACACTTTGTTTC......................................................................................... 26 0 1 1.00 1 1 0
..............................................................................................GTGCCGCAGAGTTTGTAGTGA......................................................... 21 3 20 0.05 1 1 0

Anti-sense strand reads

TTGGACGTACGGACCGATATTCGATCTTTGAATAAACGTTCACAAAGGTGGACACTATGAGTTTGACACACTGTGAAACAAAGAAAACCTTCTTCACGGCGTTTCAAACGTCACAATGGCTACCTCTTTTGACGTCAATCCCCCGACACACCGATGAGTGGACCACCGTGAG
******************************************.((((((...((((((((((((((.((((.((((((.((((....)))))))))).)))).)))))).))))))))...))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:29 PM