ID:

rno-mir-28

Coordinate:

chr11:79380523-79380608 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.7 -40.6 -40.2

Sense Strand Reads

TCATGGCAGACATCCCACTTAAGGGCAAGACGAGGAAGAATAATAGAGGTGGTCCCTACCCGCAAGGAGCTCACAGTCTATTGAGTTCCTTTTCTGATTCTCCCACTAGATTGTGAGCTCCTGGAGGGCAGGCACTTGAACTCATCTGAAAAGGTGTGTGCACGGTACAGAGGGAGCTGGCATGAA
************************************************..(((.(((.(((...((((((((((((((((..(((.((.......))..)))....))))))))))))))))...))).))).)))....**********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
.......................................................................................................CACTAGATTGTGAGCTCCTGGAA............................................................ 23 1 1 694.00 694 685 7 2
...............................................................AAGGAGCTCACAGTCTATTGAG..................................................................................................... 22 0 1 643.00 643 627 16 0
...............................................................AAGGAGCTCACAGTCTATTGA...................................................................................................... 21 0 1 609.00 609 598 11 0
...............................................................AAGGAGCTCACAGTCTATTGAGT.................................................................................................... 23 0 1 524.00 524 517 7 0
...............................................................AAGGAGCTCACAGTCTATTGAGA.................................................................................................... 23 1 1 468.00 468 451 13 4
.......................................................................................................CACTAGATTGTGAGCTCCTGGAT............................................................ 23 1 1 367.00 367 360 6 1
.......................................................................................................CACTAGATTGTGAGCTCCTGGA............................................................. 22 0 1 333.00 333 317 16 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAA........................................................... 24 2 1 296.00 296 294 2 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAT........................................................... 24 2 1 169.00 169 167 1 1
...............................................................AAGGAGCTCACAGTCTATTG....................................................................................................... 20 0 1 90.00 90 90 0 0
...............................................................AAGGAGCTCACAGTCTATTGAAA.................................................................................................... 23 2 2 50.00 100 100 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAG............................................................ 23 0 1 47.00 47 47 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGA........................................................... 24 1 1 40.00 40 40 0 0
...............................................................AAGGAGCTCACAGTCTATTGAA..................................................................................................... 22 1 2 35.00 70 69 0 1
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAAA.......................................................... 25 3 1 32.00 32 32 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAG........................................................... 24 1 1 32.00 32 32 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATT........................................................... 24 2 1 29.00 29 28 1 0
.......................................................................................................CACTAGATTGTGAGCTGCTGGA............................................................. 22 1 1 29.00 29 0 0 29
........................................................................................................ACTAGATTGTGAGCTCCTGGAA............................................................ 22 1 1 26.00 26 26 0 0
...............................................................AAGGAGCTCACAGTCTATT........................................................................................................ 19 0 1 25.00 25 25 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGG.............................................................. 21 0 1 21.00 21 20 1 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGA............................................................. 23 1 1 18.00 18 6 12 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGTA............................................................ 23 2 1 17.00 17 17 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATA........................................................... 24 2 2 16.50 33 33 0 0
...............................................................AAGGAGCTCACAGTCTAT......................................................................................................... 18 0 1 16.00 16 16 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGA............................................................. 21 0 1 12.00 12 12 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGT........................................................... 24 1 1 11.00 11 11 0 0
................................................................AGGAGCTCACAGTCTATTGAG..................................................................................................... 21 0 1 11.00 11 9 2 0
..............................................................AAAGGAGCTCACAGTCTATTGA...................................................................................................... 22 1 1 10.00 10 9 1 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAAA........................................................... 23 2 1 9.00 9 9 0 0
..............................................................AAAGGAGCTCACAGTCTATTGAG..................................................................................................... 23 1 1 9.00 9 9 0 0
..............................................................AAAGGAGCTCACAGTCTATTGAGA.................................................................................................... 24 2 1 9.00 9 9 0 0
...............................................................AAGGAGCTCACAGTCTATTGT...................................................................................................... 21 1 1 9.00 9 8 1 0
...............................................................AAGGAGCTCACAGTCTATTGAGTT................................................................................................... 24 0 1 8.00 8 7 1 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAT............................................................ 22 1 1 8.00 8 8 0 0
...............................................................AAGGAGCTCACCGTCTATTGAG..................................................................................................... 22 1 1 8.00 8 8 0 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGAA............................................................ 24 2 1 8.00 8 8 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGT............................................................. 22 1 1 8.00 8 8 0 0
................................................................AGGAGCTCACAGTCTATTGA...................................................................................................... 20 0 2 8.00 16 16 0 0
................................................................AGGAGCTCACAGTCTATTGAGT.................................................................................................... 22 0 1 7.00 7 7 0 0
...............................................................AAGGAGCTCACAGTCTATTGAATG................................................................................................... 24 2 1 7.00 7 7 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAG............................................................ 22 0 1 7.00 7 7 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGAA................................................................................................... 24 2 2 6.50 13 12 1 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAATT.......................................................... 25 3 1 6.00 6 6 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGACG........................................................... 24 1 1 6.00 6 0 0 6
...............................................................AAGGAGCTCACCGTCTATTGA...................................................................................................... 21 1 1 6.00 6 6 0 0
...............................................................AAGGAGCTCAAAGTCTATTGAG..................................................................................................... 22 1 1 6.00 6 6 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATAA.......................................................... 25 3 2 5.50 11 11 0 0
...............................................................AAGGAGCTCACAGCCTATTGAG..................................................................................................... 22 1 1 5.00 5 5 0 0
................................................................AGGAGCTCACAGTCTATTGAGA.................................................................................................... 22 1 2 5.00 10 10 0 0
...............................................................AAGGAGCTCACAGACTATTGAGA.................................................................................................... 23 2 1 5.00 5 5 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAAT........................................................... 23 2 1 5.00 5 5 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGG.................................................................................................... 23 1 1 5.00 5 5 0 0
..............................................................CAAGGAGCTCACAGTCTATTGAA..................................................................................................... 23 1 1 5.00 5 5 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGAT............................................................ 24 1 1 5.00 5 5 0 0
...............................................................AAGGAGCTCACAGTCTATTGAAT.................................................................................................... 23 1 1 5.00 5 5 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAGA.......................................................... 25 2 1 5.00 5 5 0 0
...............................................................AAGGAGCTCACAGTCTATTGAT..................................................................................................... 22 1 1 5.00 5 5 0 0
...............................................................AAGGAGCTCACAGTCTCTTGAG..................................................................................................... 22 1 1 4.00 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTG............................................................... 20 0 1 4.00 4 3 1 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAAG.......................................................... 25 2 1 4.00 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAAGA......................................................... 26 3 1 4.00 4 4 0 0
...............................................................AAGGAGCTCACAGTCTATTGAC..................................................................................................... 22 1 1 4.00 4 4 0 0
...............................................................AAGGAGCTCACAGTCTATTAA...................................................................................................... 21 1 1 4.00 4 4 0 0
...............................................................AAGGAGCTCACAGACTATTGAG..................................................................................................... 22 1 1 4.00 4 4 0 0
.......................................................................................................CAGTAGATTGTGAGCTCCTGGAA............................................................ 23 2 1 4.00 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGTAA........................................................... 24 3 3 4.00 12 12 0 0
...............................................................AAGGAGCTCACAGTCTATTGAATT................................................................................................... 24 1 1 4.00 4 4 0 0
...............................................................AAGGAGCTCAAAGTCTATTGA...................................................................................................... 21 1 1 4.00 4 4 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGA............................................................. 23 0 1 4.00 4 4 0 0
...............................................................AAGGAGCTCACAGTCTCTTGAGA.................................................................................................... 23 2 1 4.00 4 4 0 0
...............................................................AAGGAGCTCAAAGTCTATTGAGT.................................................................................................... 23 1 1 4.00 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTGCTGGAA............................................................ 23 2 1 4.00 4 0 0 4
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAGT.......................................................... 25 2 1 4.00 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGTAT........................................................... 24 3 5 3.60 18 18 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAAT.......................................................... 25 3 3 3.33 10 10 0 0
...............................................................AAGGAGCTCACAGCCTATTGAGT.................................................................................................... 23 1 1 3.00 3 3 0 0
.......................................................................................................CACTAGATTGTGAGCTGCTGGAAGT.......................................................... 25 3 1 3.00 3 0 0 3
......................................................................................................ACACTAGATTGTGAGCTCCTGG.............................................................. 22 1 1 3.00 3 0 3 0
...............................................................AAGGAGCTCACAGTCTATTGAGTAAC................................................................................................. 26 2 1 3.00 3 3 0 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGAT............................................................ 24 2 1 3.00 3 3 0 0
...............................................................ACGGAGCTCACAGTCTATTGAGA.................................................................................................... 23 2 1 3.00 3 3 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGC.................................................................................................... 23 1 1 3.00 3 3 0 0
.......................................................................................................CAATAGATTGTGAGCTCCTGGAA............................................................ 23 2 1 3.00 3 3 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATAT.......................................................... 25 3 3 3.00 9 9 0 0
...............................................................AAGGAGCTCACAGCCTATTGA...................................................................................................... 21 1 1 3.00 3 3 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGAA............................................................ 24 1 1 3.00 3 3 0 0
...............................................................AAGGAGATCACAGTCTATTGA...................................................................................................... 21 1 1 3.00 3 3 0 0
.................................................................GGAGCTCACAGTCTATTGAGA.................................................................................................... 21 1 2 2.50 5 5 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATTT.......................................................... 25 3 2 2.50 5 5 0 0
...............................................................AAGGAGCTCACAGTCTATTA....................................................................................................... 20 1 2 2.50 5 5 0 0
...............................................................AAGGAGCTTACAGTCTATTGAGA.................................................................................................... 23 2 2 2.00 4 3 1 0
..............................................................CAAGGAGCTCACAGTCTATTGA...................................................................................................... 22 0 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGGGAGCTCCTGGAT............................................................ 23 2 1 2.00 2 2 0 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGAAT........................................................... 25 3 1 2.00 2 2 0 0
..............................................................CAAGGAGCTCACAGTCTATTGAGT.................................................................................................... 24 0 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTCTTGA...................................................................................................... 21 1 1 2.00 2 2 0 0
.......................................................................................................CAGTAGATTGTGAGCTCCTGGAT............................................................ 23 2 2 2.00 4 4 0 0
.......................................................................................................CAGTAGATTGTGAGCTCCTGGA............................................................. 22 1 1 2.00 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTG............................................................... 19 0 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGATTT................................................................................................... 24 1 1 2.00 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGACA........................................................... 23 2 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGCGAGCTCCTGGA............................................................. 22 1 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGAAGT................................................................................................... 24 2 1 2.00 2 2 0 0
...............................................................AAGGAGCTCAAAGTCTATTGAGA.................................................................................................... 23 2 1 2.00 2 2 0 0
.............................................................AAAAGGAGCTCACAGTCTATTGAGT.................................................................................................... 25 2 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGCGAGCTCCTGGAA............................................................ 23 2 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGATT.................................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AAGGCGCTCACAGTCTATTGA...................................................................................................... 21 1 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAC........................................................... 24 2 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTATATTGA...................................................................................................... 21 1 1 2.00 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAGA........................................................... 23 1 1 2.00 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAGT........................................................... 23 1 1 2.00 2 2 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGT............................................................. 23 1 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGA.............................................................. 21 1 1 2.00 2 2 0 0
...............................................................AAGGCGCTCACAGTCTATTGAGA.................................................................................................... 23 2 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGACTATTGAGT.................................................................................................... 23 1 1 2.00 2 2 0 0
.......................................................................................................CACTCGATTGTGAGCTCCTGGAA............................................................ 23 2 1 2.00 2 1 1 0
...............................................................AAGGAGCTCACAGTCTATTGAAAT................................................................................................... 24 2 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGT.............................................................. 21 1 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGTAA.................................................................................................. 25 2 1 2.00 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGATA........................................................... 23 2 2 2.00 4 4 0 0
...............................................................AAGGAGCTCACAGTCTTTTGA...................................................................................................... 21 1 1 2.00 2 2 0 0
.........................................................................................................CTAGATTGTGAGCTCCTGGA............................................................. 20 0 1 2.00 2 2 0 0
..............................................................AAAGGAGCTCACAGTCTATTGAA..................................................................................................... 23 2 2 2.00 4 4 0 0
..............................................................TAAGGAGCTCACAGTCTATTGAG..................................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACCGTCTATTGAGT.................................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGACT.................................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AAGGAGCTCAGAGTCTATTGA...................................................................................................... 21 1 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAC............................................................ 23 1 1 2.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGGA............................................................ 23 2 2 1.50 3 3 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGAG................................................................................................... 24 2 2 1.50 3 3 0 0
...............................................................AAGGAGCTCACAGTCTATTGAAG.................................................................................................... 23 2 3 1.33 4 4 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGCA............................................................ 23 2 3 1.33 4 4 0 0
...............................................................AAGGAGCTCACAGTATATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCATAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACTGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAAC........................................................... 23 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAGAA......................................................... 26 3 1 1.00 1 1 0 0
.......................................................................................................CAATAGATTGTGAGCTCCTGGAAC........................................................... 24 3 1 1.00 1 1 0 0
.......................................................................................................AACTAGATTGTGAGCTCCTGGAT............................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGATAT................................................................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCT................................................................ 19 0 1 1.00 1 1 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGATT........................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGCAGCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................AAAAGGAGCTCACAGTCTATTGAG..................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGGAGCTCACAGTCTATTGA...................................................................................................... 21 1 1 1.00 1 1 0 0
...............................................................CAGGAGCTCACAGTCTATTGAGTT................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AACGAGCTCACCGTCTATTGAG..................................................................................................... 22 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGGTT.................................................................................................. 25 2 1 1.00 1 1 0 0
.......................................................................................................CACTACATTGTGAGCTCCTGGA............................................................. 22 1 1 1.00 1 0 1 0
.......................................................................................................CACTAGATCGTGAGCTCCTGGAA............................................................ 23 2 1 1.00 1 1 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGAAA........................................................... 25 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCCCCTGGA............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGATTA................................................................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTTCTGGAT............................................................ 23 2 1 1.00 1 1 0 0
...............................................................GAGGAGCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................CAGGAGCTCACAGTCTATTGA...................................................................................................... 21 1 3 1.00 3 3 0 0
.......................................................................................................CACTAGATTGAGAGCTGCTGGA............................................................. 22 2 1 1.00 1 0 0 1
.......................................................................................................CACTAGATTGTGAGCTCCTGGAATACA........................................................ 27 3 1 1.00 1 1 0 0
.......................................................................................................CACAAGATTGTGAGCTCCTGGA............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCCCACAGTCTATTGAGA.................................................................................................... 23 2 1 1.00 1 0 1 0
...............................................................AAGGCGCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACCGTCTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGACTATTGA...................................................................................................... 21 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCCATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
........................................................................................................ACTCGATTGTGAGCTCCTGGAG............................................................ 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGAAGT........................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTTGAT............................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCCCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACTGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCAAAGTCTATTGAAT.................................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTAACAGTCTATTGA...................................................................................................... 21 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGCG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAACTCCTGGAA............................................................ 23 2 2 1.00 2 2 0 0
.......................................................................................................CACTAGATTGTTAGCTCCTGGAA............................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGAAGCTCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGTT............................................................ 23 2 3 1.00 3 3 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAGTAT......................................................... 25 3 1 1.00 1 1 0 0
..............................................................AAAGGAGCTCACAGTCTATTG....................................................................................................... 21 1 1 1.00 1 1 0 0
..............................................................CAAGGAGCTCACAGTCTATTG....................................................................................................... 21 0 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTTTGAGCTCCTGGAA............................................................ 23 2 1 1.00 1 0 1 0
...............................................................AAGGAGATCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGGCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGGGCTCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................ACGGAGCTCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTGCTGGAAT........................................................... 24 3 3 1.00 3 0 0 3
...............................................................AAGAAGCTCACAGTCTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
.....................................................................................................ACCACTAGATTGTGAGCTCCTGGA............................................................. 24 1 1 1.00 1 0 1 0
.......................................................................................................CACTCGATTGTGAGCTCCTGGAG............................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGAAGCTCACAGTCTATTG....................................................................................................... 20 1 1 1.00 1 1 0 0
................................................................AGGAGCTCATAGTCTATTGAG..................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................AAAAAGGAGCTCACAGTCTATTGAGT.................................................................................................... 26 3 2 1.00 2 2 0 0
...............................................................AAGGAGCACACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGCGCTCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGGT.......................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACCGTATATTGA...................................................................................................... 21 2 1 1.00 1 1 0 0
......................................................................................................CCACTAGATTGTGAGCTCCTGGAGT........................................................... 25 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCCGGA............................................................. 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGATGCTGGA............................................................. 22 2 1 1.00 1 0 0 1
...............................................................AAGGAGCTCACAGTATATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGCCTATTGAGTA................................................................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGCGAGCTCCTGGAAT........................................................... 24 3 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGACCTCCTGGAA............................................................ 23 2 2 1.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCC................................................................. 18 0 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTATGAGCTCCTGGAT............................................................ 23 2 1 1.00 1 1 0 0
.................................................................GGAGCTCACAGTCTATTGAG..................................................................................................... 20 0 1 1.00 1 1 0 0
...............................................................AAGGAGCTTACAGTCTATTGA...................................................................................................... 21 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGTTC.................................................................................................. 25 0 1 1.00 1 0 1 0
.......................................................................................................CACTGGATTGTGAGCTCCTGGA............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGAATA................................................................................................... 24 2 2 1.00 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGGGT........................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGAGCCCACAGTCTATTG....................................................................................................... 20 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTCTTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGAGCACACAGTCTATTGA...................................................................................................... 21 1 1 1.00 1 1 0 0
.................................................................GGAGCTCACAGTCTATTGA...................................................................................................... 19 0 2 1.00 2 1 1 0
.......................................................................................................CAGTAGATTGTGAGCTCCTGGAAG........................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGTAG........................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGC............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGCCTATAGAGT.................................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTACTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGATT......................................................... 26 3 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGGCTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATTA.......................................................... 25 3 1 1.00 1 1 0 0
...............................................................AAGGAACTCACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CAATAGATTGTGAGCTCCTGGAT............................................................ 23 2 1 1.00 1 1 0 0
.......................................................................................................CATTAGATTGTGAGCTCCTGGATT........................................................... 24 3 1 1.00 1 1 0 0
....................................................................GCTCACAGTCTATTGAGT.................................................................................................... 18 0 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGACAA.......................................................... 25 3 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTTAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGCGCTCACAGTCTATTGAATG................................................................................................... 24 3 1 1.00 1 1 0 0
...............................................................AAGGATCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGAG............................................................ 24 1 1 1.00 1 1 0 0
.......................................................................................................CACGAGATTGTGAGCTCCTGGAGAA.......................................................... 25 3 1 1.00 1 1 0 0
......................................................................................................ACACTAGATTGTGAGCTCCTGGAAG........................................................... 25 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGGTCCTGGA............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACCGTCTATTGAAGT................................................................................................... 24 3 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGGGCTCCTGGAA............................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTAACAGTCTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGACCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
.......................................................................................................CATTAGATTGTGAGCTCCTGGACG........................................................... 24 2 1 1.00 1 0 0 1
...............................................................ACGGAGCTCACAGTCTATTGAGT.................................................................................................... 23 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATG........................................................... 24 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGAAA......................................................... 26 3 1 1.00 1 0 1 0
...............................................................AAGGAGCTCACAGTCTATCGA...................................................................................................... 21 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAGAT.......................................................... 25 2 1 1.00 1 1 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAGAA.......................................................... 24 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCCGGAA............................................................ 23 2 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGAAA............................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGGCTCACAGTCTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAAG........................................................... 23 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGGTCCTGGAGA........................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACGGTCTATTGAG..................................................................................................... 22 1 2 1.00 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGATTG................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACCGTATATTGAG..................................................................................................... 22 2 1 1.00 1 1 0 0
..........................................................................................................TAGATTGTGAGCTCCTGGAG............................................................ 20 0 1 1.00 1 0 1 0
...............................................................AAGCAGCTCACAGTCTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTTTATTGAGA.................................................................................................... 23 2 1 1.00 1 1 0 0
.........................................................................................................CTAGATTGTGAGCTCCTGGAA............................................................ 21 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTTTATTGAG..................................................................................................... 22 1 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGAAAC.......................................................... 25 3 1 1.00 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTACTGGA............................................................. 22 1 1 1.00 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTT....................................................................................................... 20 1 4 0.75 3 3 0 0
...............................................................TAGGAGCTCACAGTCTATTGA...................................................................................................... 21 1 3 0.67 2 2 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAAAA.......................................................... 24 3 3 0.67 2 2 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGAAT.................................................................................................. 25 3 5 0.60 3 3 0 0
...............................................................AAGGAGCTCACAGTCTATGGAGT.................................................................................................... 23 1 2 0.50 1 1 0 0
.......................................................................................................CCCTAGATTGTGAGCTCCTGGAGT........................................................... 24 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGAGAGA.................................................................................................. 25 3 8 0.50 4 4 0 0
.......................................................................................................CACTGGATTGTGAGCTCCTGGAA............................................................ 23 2 2 0.50 1 1 0 0
.......................................................................................................CACTGGATTGTGAGCTCCTGGAT............................................................ 23 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATAGA...................................................................................................... 21 1 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATCGAGAA................................................................................................... 24 3 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCCATTG....................................................................................................... 20 1 2 0.50 1 1 0 0
.......................................................................................................CACTAGATTGTGAACTCCTGGAAT........................................................... 24 3 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACCGTATATTGAGA.................................................................................................... 23 3 4 0.50 2 2 0 0
.......................................................................................................CACTAGATTGTCAGCTGCTGGA............................................................. 22 2 2 0.50 1 0 0 1
...............................................................CAGGAGCTCACAGTCTATTGAG..................................................................................................... 22 1 2 0.50 1 1 0 0
....................................................................................................ATTCACTAGATTGTGAGCTCCTGGA............................................................. 25 3 2 0.50 1 0 1 0
...............................................................AAGGAGCTCACAGCCTATTGAA..................................................................................................... 22 2 2 0.50 1 1 0 0
......................................................................................................TCCCTAGATTGTGAGCTCCTGGA............................................................. 23 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACTGTCTATTGAGC.................................................................................................... 23 2 2 0.50 1 1 0 0
..............................................................AAAGGAGCTCACAGTCTATT........................................................................................................ 20 1 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTCTTGCG..................................................................................................... 22 2 2 0.50 1 1 0 0
...............................................................CAGGAGCTCACAGTCTATTGAGG.................................................................................................... 23 2 2 0.50 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTACTGGAT............................................................ 23 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTATTGTA..................................................................................................... 22 2 4 0.50 2 2 0 0
.......................................................................................................CACTAGATTGTGAGCTGCTGGT............................................................. 22 2 2 0.50 1 0 0 1
...............................................................AAGGAGCTCACAGTCTATTGACA.................................................................................................... 23 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCCCAGTCTATTG....................................................................................................... 20 1 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACGGTCTATTGAGG.................................................................................................... 23 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTAACAGTCTATTGAGA.................................................................................................... 23 2 2 0.50 1 1 0 0
......................................................................................................CCACTAGATTGTGAACTCCTGGAAT........................................................... 25 3 2 0.50 1 1 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGGAGAAAA........................................................ 26 3 2 0.50 1 1 0 0
.......................................................................................................CACTAGATTGTGAGCTCCTGGATAG.......................................................... 25 2 2 0.50 1 1 0 0
........................................................................................................ACTAGATTGTGAGCTCCTGAA............................................................. 21 1 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACAGTCTCTTG....................................................................................................... 20 1 2 0.50 1 1 0 0
.......................................................................................................CTCTAGATTGTGAGCTCCTGGAAG........................................................... 24 2 2 0.50 1 0 1 0
...............................................................AAGGAGCTCACCGTTTATTGA...................................................................................................... 21 2 2 0.50 1 1 0 0
...............................................................AAGGAGCTCACGGTCTATTGAGA.................................................................................................... 23 2 2 0.50 1 1 0 0
...............................................................AAGAAGCTAACAGTCTATTGAGT.................................................................................................... 23 2 2 0.50 1 1 0 0

Anti-sense strand reads

AGTACCGTCTGTAGGGTGAATTCCCGTTCTGCTCCTTCTTATTATCTCCACCAGGGATGGGCGTTCCTCGAGTGTCAGATAACTCAAGGAAAAGACTAAGAGGGTGATCTAACACTCGAGGACCTCCCGTCCGTGAACTTGAGTAGACTTTTCCACACACGTGCCATGTCTCCCTCGACCGTACTT
**********************************************..(((.(((.(((...((((((((((((((((..(((.((.......))..)))....))))))))))))))))...))).))).)))....************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..............................................................................................................AACACTCGAGGACCTCCTGTCCCT.................................................... 24 2 3 7.33 22 22 0 0
..............................................................................................................AAAACTCGAGGACCTCCTGTCCCT.................................................... 24 3 9 3.78 34 34 0 0
..............................................................................................................AATACTCGAGGACCTCCTGTCCCT.................................................... 24 3 10 2.50 25 25 0 0
.............................................................................................................TAACACTCGAGGACCTCCTGTCCCT.................................................... 25 2 2 2.50 5 5 0 0
.............................................................................................................TAATACTCGAGGACCTCCTGTCCCT.................................................... 25 3 4 1.75 7 7 0 0
........................................................................................................TGATCTGACACTCGAGGACCT............................................................. 21 1 2 1.50 3 1 2 0
........................................................................................................TGATCTAACACTCGAGGAGCT............................................................. 21 1 3 1.00 3 2 0 1
..............................................................................................................AGCACTCGAGGACCTCCTGTCCGT.................................................... 24 2 2 0.50 1 1 0 0
..............................................................................................................AACACTCGAGGACCTCCTGTCCC..................................................... 23 2 6 0.50 3 3 0 0
........................................................................................................TGATCTAACCCTCGAGGAGCT............................................................. 21 2 4 0.25 1 1 0 0
.............................................................................................................TAAAACTCGAGGACCTCCTGTCCCT.................................................... 25 3 4 0.25 1 1 0 0
.............................................................................................................TATCACTCGAGGACCTCCTGTCCCT.................................................... 25 3 5 0.20 1 1 0 0
..............................................................................................................AATACTCGAGGACCTCCTGTCCC..................................................... 23 3 20 0.15 3 3 0 0
..............................................................................................................AACACTCGAGGACCTCCTGCCCCT.................................................... 24 3 8 0.13 1 1 0 0
..............................................................................................................AAAACTCGAGGACCTCCTGTCCC..................................................... 23 3 20 0.10 2 2 0 0
...............................................................................TAACTCAAGGAAAAGA........................................................................................... 16 0 13 0.08 1 0 1 0

Generated: 04/30/2015 at 05:34 PM