ID:

rno-mir-26a

 Coordinate:

chr8:127714441-127714530 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-59.8 -59.5
mature
  1. chr7:70287326-70287347 +
  2. chr8:127714456-127714477 +
star

Sense Strand Reads

AACTCCAGAGAGAAGGAAGGCACAAAAGCTGGAGGGCCAAGGCCCTGGCGAAGGCCGTGGCCTTGTTCAAGTAATCCAGGATAGGCTGTGCAGGTCCCAAGGGGCCTATTCTTGGTTACTTGCACGGGGACGCGGGCCTGGACGCCTGCATCCGGGCCCAGGATCCTCCTTTCTGTAAAGGCGGCAACAT
***********************************.((........((((.((((((((.((((((.(((((((((.((((((((((...............)))))))))).))))))))).)))))).))))).)))...)))).......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.................................................................TTCAAGTAATCCAGGATAGGCT....................................................................................................... 22 0 2 22522.50 45045 43976 707 362
.................................................................TTCAAGTAATCCAGGATAGGCTT...................................................................................................... 23 1 2 13060.50 26121 25905 120 96
.................................................................TTCAAGTAATCCAGGATAGGCTAT..................................................................................................... 24 1 2 11238.00 22476 22353 34 89
.................................................................TTCAAGTAATCCAGGATAGGCTA...................................................................................................... 23 1 2 10466.50 20933 20724 52 157
.................................................................TTCAAGTAATCCAGGATAGGCTTT..................................................................................................... 24 1 2 7151.50 14303 14150 85 68
.................................................................TTCAAGTAATCCAGGATAGGCTAA..................................................................................................... 24 2 2 5854.00 11708 11666 15 27
.................................................................TTCAAGTAATCCAGGATAGGC........................................................................................................ 21 0 2 2573.00 5146 4768 296 82
.................................................................TTCAAGTAATCCAGGATAGGCTAAA.................................................................................................... 25 3 2 1754.00 3508 3505 1 2
.................................................................TTCAAGTAATCCAGGATAGGCAA...................................................................................................... 23 2 2 1666.50 3333 3306 8 19
.................................................................TTCAAGTAATCCAGGATAGGCTTA..................................................................................................... 24 2 2 1603.00 3206 3192 3 11
.................................................................TTCAAGTAATCCAGGATAGGCA....................................................................................................... 22 1 2 753.50 1507 1470 33 4
.................................................................TTCAAGTAATCCAGGATAGG......................................................................................................... 20 0 2 706.50 1413 1250 150 13
..................................................................TCAAGTAATCCAGGATAGGCT....................................................................................................... 21 0 2 676.50 1353 1304 36 13
.................................................................TTCAAGTAATCCAGGATAGGCAT...................................................................................................... 23 2 2 641.00 1282 1268 9 5
.................................................................TTCAAGTAATCCAGGATAGGCTTAA.................................................................................................... 25 3 4 637.75 2551 2550 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTTTA.................................................................................................... 25 2 2 606.00 1212 1210 1 1
.................................................................TTCAAGTAATCCAGGATAGGCTG...................................................................................................... 23 0 2 477.00 954 950 3 1
.................................................................TTCAAGTAATCCAGGATAGGCTAG..................................................................................................... 24 2 2 426.50 853 852 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTGT..................................................................................................... 24 0 2 399.50 799 779 5 15
..................................................................TCAAGTAATCCAGGATAGGCTT...................................................................................................... 22 1 2 399.00 798 787 11 0
.................................................................TTCAAGTAATCCAGGATAGGCTAAG.................................................................................................... 25 2 1 310.00 310 310 0 0
..................................................................TCAAGTAATCCAGGATAGGCTAT..................................................................................................... 23 1 2 307.50 615 615 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTAA................................................................................................... 26 3 2 291.00 582 582 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTAGA.................................................................................................... 25 3 2 289.00 578 575 0 3
..................................................................TCAAGTAATCCAGGATAGGCTA...................................................................................................... 22 1 2 251.50 503 500 3 0
.................................................................TTCAAGTAATCCAGGATAGGCTATA.................................................................................................... 25 2 2 236.50 473 471 1 1
.................................................................TTCAAGTAATCCAGGATAGGCAAT..................................................................................................... 24 2 2 223.50 447 442 1 4
.................................................................TTCAAGTAATCCAGGATAGGCTGA..................................................................................................... 24 1 2 214.50 429 426 2 1
..................................................................TCAAGTAATCCAGGATAGGCTTT..................................................................................................... 23 1 2 196.50 393 385 4 4
.................................................................TTCAAGTAATCCAGGATAGGCTAAGA................................................................................................... 26 3 1 156.00 156 156 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTAG.................................................................................................... 25 2 1 156.00 156 147 0 9
..................................................................TCAAGTAATCCAGGATAGGCTAA..................................................................................................... 23 2 2 154.00 308 308 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTATAA................................................................................................... 26 3 2 123.50 247 247 0 0
.................................................................TTCCAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 114.00 228 225 0 3
.................................................................TTCAAGTAATCCAGGATAGGCAG...................................................................................................... 23 1 2 106.50 213 212 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTAC..................................................................................................... 24 2 2 82.50 165 165 0 0
..................................................................TCAAGTAATCCAGGATAGGC........................................................................................................ 20 0 2 77.00 154 138 16 0
.................................................................TTCAAGTAATCCAGGATAG.......................................................................................................... 19 0 2 76.50 153 113 38 2
.................................................................TTCCAGTAATCCAGGATAGGCTT...................................................................................................... 23 2 2 75.50 151 148 0 3
.................................................................TTCAAGTAATCAAGGATAGGCT....................................................................................................... 22 1 2 71.50 143 140 0 3
.................................................................TTCAAGTAATCCAGGATAGGCC....................................................................................................... 22 1 2 71.00 142 136 1 5
.................................................................TTCCAGTAATCCAGGATAGGCTAT..................................................................................................... 24 2 2 67.00 134 132 0 2
.................................................................TTCAAGTAATCCAGGATAGGCAAA..................................................................................................... 24 3 8 63.50 508 507 0 1
.................................................................TTCCAGTAATCCAGGATAGGCTA...................................................................................................... 23 2 2 63.50 127 126 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTTTAAA.................................................................................................. 27 3 1 63.00 63 63 0 0
.................................................................TTCAAGTAATCCAGGATAGGCATT..................................................................................................... 24 2 2 62.50 125 123 2 0
.................................................................TTCAAGTAATCCAGGATAGGCGA...................................................................................................... 23 2 2 62.50 125 124 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTTG..................................................................................................... 24 2 2 57.50 115 114 1 0
.................................................................TTCAAGTACTCCAGGATAGGCT....................................................................................................... 22 1 2 56.50 113 110 0 3
.................................................................TTCCAGTACTCCAGGATAGGCT....................................................................................................... 22 2 3 56.00 168 167 0 1
....................................................................AAGTAATCCAGGATAGGCT....................................................................................................... 19 0 2 55.00 110 96 14 0
.................................................................TTCAAGTAATCCAGGATAGGCTAAGT................................................................................................... 26 3 2 49.00 98 98 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTGAA.................................................................................................... 25 2 2 49.00 98 95 0 3
.................................................................TTCAAGTAATCCAGGATAGGCTC...................................................................................................... 23 1 2 46.50 93 93 0 0
.................................................................TTCAAGTAATCCAGGATAGGCCA...................................................................................................... 23 2 2 43.50 87 85 0 2
..................................................................TCAAGTAATCCAGGATAGGCAA...................................................................................................... 22 2 2 43.50 87 85 2 0
.................................................................TTCAAGTAATCCAGGATAGGCTCT..................................................................................................... 24 1 2 41.50 83 75 0 8
.................................................................TTCAAGTAATCCAGGATAGGCG....................................................................................................... 22 1 2 41.50 83 71 1 11
.................................................................TTCAAGTAATCCAAGATAGGCT....................................................................................................... 22 1 2 40.50 81 81 0 0
.................................................................TTCAAGTAATCCAGGATAGGA........................................................................................................ 21 1 2 40.00 80 57 23 0
........................................................................AATCCAGGATAGGCT....................................................................................................... 15 0 9 38.67 348 9 339 0
.................................................................TTCAAGTAATACAGGATAGGCT....................................................................................................... 22 1 2 38.50 77 74 0 3
.................................................................TTCAAGTAATCAAGGATAGGCTT...................................................................................................... 23 2 2 37.50 75 74 0 1
.................................................................TTCCAGTAATCCAGGATAGGCTAA..................................................................................................... 24 3 2 37.00 74 74 0 0
.................................................................TTCAAGTAATCAAGGATAGGCTAT..................................................................................................... 24 2 2 37.00 74 74 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTC..................................................................................................... 24 2 2 35.50 71 70 1 0
.................................................................TTCCAGTAATCCAGGATAGGCTTT..................................................................................................... 24 2 2 34.00 68 67 0 1
.................................................................TTCAAGTACTCCAGGATAGGCTAT..................................................................................................... 24 2 2 32.50 65 64 0 1
.................................................................TTCAAGTAATCCAGGATAGGT........................................................................................................ 21 1 3 31.67 95 88 7 0
.................................................................TTCAAGTAATCCAGGATAGGCCAT..................................................................................................... 24 2 2 31.50 63 63 0 0
.................................................................TTCAAGTAATCCAGGATAGGCCT...................................................................................................... 23 2 2 31.00 62 60 0 2
..................................................................TCAAGTAATCCAGGATAGGCTGT..................................................................................................... 23 0 2 30.50 61 61 0 0
.................................................................TTCAAGTAATACAGGATAGGCTT...................................................................................................... 23 2 2 30.00 60 59 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTAAC.................................................................................................... 25 3 2 29.50 59 59 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTGA.................................................................................................... 25 3 2 29.50 59 58 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTTAGA................................................................................................... 26 3 2 29.00 58 57 1 0
.................................................................TTCAAGTACTCCAGGATAGGCTA...................................................................................................... 23 2 2 28.50 57 56 0 1
.................................................................TTCAAGTAATCCAGGATAGGCGT...................................................................................................... 23 2 2 28.00 56 56 0 0
..................................................................TCAAGTAATCCAGGATAGGCTTA..................................................................................................... 23 2 3 27.67 83 83 0 0
.................................................................TTCAAGTAATACAGGATAGGCTAT..................................................................................................... 24 2 2 27.50 55 55 0 0
.................................................................TTCAAGTAATCCAGGATAGGCAGT..................................................................................................... 24 1 2 27.00 54 54 0 0
.................................................................TTCAAGTAATCCACGATAGGCT....................................................................................................... 22 1 2 26.50 53 51 0 2
.................................................................TTCAAGTAATACAGGATAGGCTA...................................................................................................... 23 2 2 26.50 53 52 0 1
.....................................................................AGTAATCCAGGATAGGCT....................................................................................................... 18 0 2 25.00 50 35 15 0
.................................................................TTCAAGTAATCAAGGATAGGCTTT..................................................................................................... 24 2 2 25.00 50 50 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTAGT................................................................................................... 26 3 2 24.50 49 49 0 0
.................................................................TTCAAGTAATCAAGGATAGGCTA...................................................................................................... 23 2 2 24.50 49 48 0 1
.................................................................TTCAAGTAATCTAGGATAGGCT....................................................................................................... 22 1 2 24.00 48 47 0 1
..................................................................TCAAGTAATCCAGGATAGGCA....................................................................................................... 21 1 2 24.00 48 47 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTGTAA................................................................................................... 26 2 2 23.50 47 47 0 0
...................................................................CAAGTAATCCAGGATAGGCT....................................................................................................... 20 0 2 23.00 46 42 4 0
.................................................................TTCCAGTACTCCAGGATAGGCTTT..................................................................................................... 24 3 3 23.00 69 69 0 0
..................................................................TCAAGTAATCCAGGATAGGCTG...................................................................................................... 22 0 2 23.00 46 45 0 1
.................................................................TTACAGTAATCCAGGATAGGCT....................................................................................................... 22 2 2 23.00 46 45 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTACA.................................................................................................... 25 3 2 22.50 45 45 0 0
.................................................................TTCAAGTAATTCAGGATAGGCT....................................................................................................... 22 1 3 22.33 67 62 2 3
.................................................................TTCAAGTAATCCAGGATAGGCCTT..................................................................................................... 24 2 2 21.50 43 42 0 1
..................................................................TCAAGTAATCCAGGATAGG......................................................................................................... 19 0 2 21.00 42 37 5 0
.................................................................TTCAAGTAATCCAGGATAGGCTATAAA.................................................................................................. 27 3 1 21.00 21 21 0 0
.................................................................TTCCAGTACTCCAGGATAGGCTAT..................................................................................................... 24 3 5 21.00 105 105 0 0
.................................................................TTCAAGTACTCCAGGATAGGCTTT..................................................................................................... 24 2 2 21.00 42 42 0 0
....................................................................AAGTAATCCAGGATAGGCTT...................................................................................................... 20 1 2 20.50 41 38 3 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTGT................................................................................................... 26 2 2 20.50 41 41 0 0
......................................................................GTAATCCAGGATAGGCT....................................................................................................... 17 0 2 20.50 41 25 16 0
.................................................................TTCAAGTAATCCAGGATAGGCAGA..................................................................................................... 24 2 3 20.33 61 61 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTTAA.................................................................................................. 27 3 2 20.00 40 40 0 0
.......................................................................TAATCCAGGATAGGCT....................................................................................................... 16 0 3 19.67 59 32 27 0
.................................................................TTCAAGTAATACAGGATAGGCTTT..................................................................................................... 24 2 2 19.50 39 39 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTG.................................................................................................... 25 1 1 19.00 19 19 0 0
................................................................TTTCAAGTAATCCAGGATAGGC........................................................................................................ 22 1 2 19.00 38 38 0 0
.................................................................TTCAAGTAATCCACGATAGGCTT...................................................................................................... 23 2 2 18.50 37 36 0 1
.................................................................TTCAAGTAATCCAGGATAGGTT....................................................................................................... 22 1 3 18.33 55 54 1 0
.................................................................TTCAAGTAATGCAGGATAGGCT....................................................................................................... 22 1 2 18.00 36 35 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTTAAC................................................................................................... 26 3 1 18.00 18 18 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTAAGAA.................................................................................................. 27 3 1 18.00 18 18 0 0
.................................................................TTCAAGTAATCCAGGATAAGCT....................................................................................................... 22 1 2 18.00 36 34 0 2
.................................................................TTCAAGTAATCCAGGATAGGCTGAAA................................................................................................... 26 3 2 18.00 36 36 0 0
.................................................................TTCAAGTAATCCAGCATAGGCT....................................................................................................... 22 1 2 17.50 35 34 1 0
.................................................................TTCAAGCAATCCAGGATAGGCT....................................................................................................... 22 1 2 17.00 34 33 1 0
.................................................................TTCAAGTACTCCAGGATAGGCTT...................................................................................................... 23 2 3 16.67 50 49 0 1
.................................................................TTCAAGTAATCCAAGATAGGCTT...................................................................................................... 23 2 2 16.50 33 33 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTCA..................................................................................................... 24 2 2 16.50 33 33 0 0
.................................................................TTCCAGTACTCCAGGATAGGCTT...................................................................................................... 23 3 7 16.43 115 114 0 1
..................................................................TCAAGTAATCCAGGATAGGCTAAA.................................................................................................... 24 3 5 16.20 81 81 0 0
.................................................................TTCAAGTAATCCAGGATAGGCAAAG.................................................................................................... 25 3 1 16.00 16 16 0 0
.................................................................TTCAAGTAATCCACGATAGGCTAT..................................................................................................... 24 2 2 16.00 32 31 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTTTAG................................................................................................... 26 3 2 16.00 32 32 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTC.................................................................................................... 25 2 2 15.50 31 31 0 0
.................................................................TTCAAGTAATCCAGAATAGGCT....................................................................................................... 22 1 2 15.00 30 30 0 0
..................................................................TCAAGTAATCCAGGATAGGCTGA..................................................................................................... 23 1 2 15.00 30 30 0 0
.................................................................TTCAAGTAATCCAGGACAGGCT....................................................................................................... 22 1 2 15.00 30 29 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTATGA................................................................................................... 26 2 1 15.00 15 15 0 0
.................................................................TTAAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 14.50 29 26 2 1
.................................................................TTCACGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 14.50 29 28 1 0
.................................................................TTCAAGTAATCCACGATAGGCTA...................................................................................................... 23 2 2 14.00 28 28 0 0
.................................................................TTCAAGTAATCCAAGATAGGCTA...................................................................................................... 23 2 2 14.00 28 27 0 1
..................................................................TCAAGTAATCCAGGATAGGCTTTA.................................................................................................... 24 2 2 14.00 28 28 0 0
.................................................................TTCAAGTAATCCAGGATAGGCAAG..................................................................................................... 24 3 3 14.00 42 42 0 0
.................................................................TTCAAGTAATCCAGGATAGGAT....................................................................................................... 22 1 2 13.50 27 24 1 2
...................................................................CAAGTAATCCAGGATAGGCTT...................................................................................................... 21 1 2 13.50 27 15 1 11
.................................................................TTCAAGTAATCCAGGATAGGCTGTA.................................................................................................... 25 1 2 13.50 27 27 0 0
.................................................................TTCAAGTAATCAAGGATAGGCTAA..................................................................................................... 24 3 3 13.00 39 38 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTTAGAA.................................................................................................. 27 3 1 13.00 13 13 0 0
.................................................................TTCAAGTAATGCAGGATAGGCTAT..................................................................................................... 24 2 2 13.00 26 26 0 0
.................................................................TTCAAGTAATTCAGGATAGGCTA...................................................................................................... 23 2 3 13.00 39 39 0 0
.................................................................TTCAAGTCATCCAGGATAGGCT....................................................................................................... 22 1 2 13.00 26 25 1 0
.................................................................TTCAAGTAATCCAGGATAGGAA....................................................................................................... 22 2 4 12.75 51 43 7 1
.................................................................TTCAAGTAATCCAGGATAGGCCAA..................................................................................................... 24 3 3 12.67 38 38 0 0
.................................................................TTCAAGTAATCCAAGATAGGCTAT..................................................................................................... 24 2 2 12.50 25 25 0 0
.................................................................TTCAAGCAATCCAGGATAGGCTA...................................................................................................... 23 2 2 12.50 25 24 1 0
.................................................................TTCAAGTAATCCAGGATAAGCTAT..................................................................................................... 24 2 2 12.50 25 24 0 1
.................................................................TTCCAGTAATCCAGGATAGGC........................................................................................................ 21 1 2 12.50 25 24 0 1
.................................................................TTCAAGTAATGCAGGATAGGCTT...................................................................................................... 23 2 2 12.00 24 22 1 1
..................................................................TCAAGTAATCCAGGATAGGCAT...................................................................................................... 22 2 3 11.67 35 35 0 0
.....................................................................AGTAATCCAGGATAGGCTTT..................................................................................................... 20 1 2 11.50 23 15 8 0
.................................................................TTCAAGTAATCCAGGATAGGCTATGT................................................................................................... 26 2 2 11.50 23 23 0 0
.................................................................TTCAAGTAACCCAGGATAGGCT....................................................................................................... 22 1 2 11.50 23 22 0 1
.................................................................TTCAAGTAATCCAGGACAGGCTAT..................................................................................................... 24 2 2 11.50 23 23 0 0
.................................................................TTCAAGTAATCCATGATAGGCT....................................................................................................... 22 1 2 11.50 23 21 2 0
.................................................................TTCCAGTACTCCAGGATAGGCTA...................................................................................................... 23 3 8 11.38 91 89 0 2
.................................................................TTTCAGTAATCCAGGATAGGCT....................................................................................................... 22 2 3 11.33 34 34 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTGA................................................................................................... 26 2 1 11.00 11 11 0 0
.................................................................TTCAAGTAATCCAAGATAGGCTTT..................................................................................................... 24 2 2 11.00 22 21 0 1
.................................................................TTCAAGTAATCCAGGATAGGCTATTAA.................................................................................................. 27 3 2 11.00 22 22 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTAAAC................................................................................................... 26 3 1 11.00 11 9 2 0
.................................................................TTCAAGTAATCCAGGATAGGCGAA..................................................................................................... 24 3 2 11.00 22 22 0 0
.................................................................TTCAAGTAATCCAGGATAGGCGAT..................................................................................................... 24 2 2 11.00 22 21 0 1
.................................................................CTCAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 11.00 22 22 0 0
.................................................................TTCAAGTAATCCAGGATCG.......................................................................................................... 19 1 2 11.00 22 0 0 22
.................................................................TTCAAGTAATCCAGAATAGGCTAT..................................................................................................... 24 2 2 10.50 21 21 0 0
....................................................................AAGTAATCCAGGATAGGCTTT..................................................................................................... 21 1 2 10.50 21 18 3 0
.................................................................TTACAGTAATCCAGGATAGGCTAT..................................................................................................... 24 3 2 10.50 21 21 0 0
.................................................................TTCAAGTAATCCAGGATACGCT....................................................................................................... 22 1 2 10.50 21 21 0 0
.................................................................TTGCAGTAATCCAGGATAGGCT....................................................................................................... 22 2 3 10.33 31 30 0 1
...................................................................CAAGTAATCCAGGATAGGCTA...................................................................................................... 21 1 2 10.00 20 8 0 12
.................................................................TTAAAGTAATCCAGGATAGGCTT...................................................................................................... 23 2 2 10.00 20 19 0 1
..................................................................TCAAGTAATCCAGGATAGGCTTTAA................................................................................................... 25 3 2 10.00 20 20 0 0
.................................................................TTCAAGTAATCTAGGATAGGCTAT..................................................................................................... 24 2 2 10.00 20 20 0 0
.................................................................TTCAAGTAATCTAGGATAGGCTT...................................................................................................... 23 2 2 10.00 20 20 0 0
.................................................................TTCAAGTACTCCAGGATAGGC........................................................................................................ 21 1 3 10.00 30 30 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTATG.................................................................................................... 25 1 1 10.00 10 10 0 0
..................................................................TCAAGTAATCCAGGATAGGCTAG..................................................................................................... 23 2 2 10.00 20 20 0 0
.................................................................TTCAAGTAATCCAGGAAAGGCT....................................................................................................... 22 1 2 9.50 19 18 0 1
.................................................................TTCAAGTAATCCAGAATAGGCTT...................................................................................................... 23 2 2 9.50 19 19 0 0
.................................................................TTCAAGTAATCCAGTATAGGCT....................................................................................................... 22 1 2 9.50 19 17 2 0
.................................................................TTCAAGTAATCCAGGAAAGGCTT...................................................................................................... 23 2 2 9.50 19 19 0 0
.................................................................TTCAAGTAATCCAGCATAGGCTA...................................................................................................... 23 2 2 9.50 19 17 1 1
.................................................................TTCAAGTAATCCAGGATAGGCAATA.................................................................................................... 25 3 2 9.50 19 19 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTCG..................................................................................................... 24 2 2 9.50 19 3 0 16
....................................................................AAGTAATCCAGGATAGGCTAT..................................................................................................... 21 1 2 9.50 19 19 0 0
.................................................................TTCAAGTAATCCAAGATAGGCTAA..................................................................................................... 24 3 3 9.33 28 28 0 0
.................................................................TTCAAGTAATCCAGGATAGGTTT...................................................................................................... 23 2 3 9.33 28 28 0 0
.................................................................TTCAAGTAATCCAGCATAGGCTAT..................................................................................................... 24 2 2 9.00 18 17 1 0
.................................................................TTCAAGTAATGCAGGATAGGCTA...................................................................................................... 23 2 2 9.00 18 18 0 0
.................................................................TTCAAGTAATCCAGGATAGGCATA..................................................................................................... 24 3 4 9.00 36 36 0 0
..................................................................TCAAGTAATCCAGGATAGGCTATA.................................................................................................... 24 2 2 9.00 18 18 0 0
.................................................................GTCAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 9.00 18 17 1 0
.................................................................TTCAAGTAATCGAGGATAGGCT....................................................................................................... 22 1 2 9.00 18 18 0 0
.................................................................TTCAAGTCATCCAGGATAGGCTAT..................................................................................................... 24 2 2 9.00 18 18 0 0
.................................................................TTCAAGTAATCCAGGATAGGTTA...................................................................................................... 23 2 3 8.67 26 26 0 0
.................................................................TTCAAGGAATCCAGGATAGGCT....................................................................................................... 22 1 2 8.50 17 16 1 0
.................................................................TTCAAGTAATCCAGGATAGCCT....................................................................................................... 22 1 2 8.50 17 17 0 0
.................................................................TTCAAGTAATCTAGGATAGGCTA...................................................................................................... 23 2 2 8.50 17 17 0 0
.................................................................ATCAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 8.50 17 16 1 0
....................................................................AAGTAATCCAGGATAGGCTA...................................................................................................... 20 1 2 8.50 17 16 0 1
.................................................................TTCAAGTAATCCCGGATAGGCT....................................................................................................... 22 1 2 8.50 17 17 0 0
.................................................................TTCGAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 8.50 17 17 0 0
.................................................................TTCAAGTAATACAGGATAGGC........................................................................................................ 21 1 2 8.50 17 16 0 1
.................................................................TTCAAGTAATCCAGCATAGGCTT...................................................................................................... 23 2 2 8.50 17 17 0 0
.................................................................TTCAAGTAATCCAGGATAGGCAC...................................................................................................... 23 2 2 8.50 17 17 0 0
...................................................................CAAGTAATCCAGGATAGGCTTT..................................................................................................... 22 1 2 8.50 17 17 0 0
.................................................................TTCAAGTAATACAGGATAGGCTAA..................................................................................................... 24 3 4 8.25 33 33 0 0
.................................................................TTCAAGTAATTCAGGATAGGCTT...................................................................................................... 23 2 5 8.20 41 40 1 0
.................................................................TTCGAGTACTCCAGGATAGGCT....................................................................................................... 22 2 2 8.00 16 16 0 0
.................................................................TTCAAGTCATCCAGGATAGGCTA...................................................................................................... 23 2 2 8.00 16 16 0 0
.................................................................TTCAAGTAATCCACGATAGGCTTT..................................................................................................... 24 2 2 8.00 16 16 0 0
.................................................................TTCAAGTAATCAAGGATAGGC........................................................................................................ 21 1 2 8.00 16 16 0 0
.................................................................GTCAAGTAATCAAGGATAGGCT....................................................................................................... 22 2 2 8.00 16 16 0 0
.................................................................TTCAAGTAATTCAGGATAGGCTAT..................................................................................................... 24 2 3 8.00 24 23 0 1
.....................................................................AGTAATCCAGGATAGGCTT...................................................................................................... 19 1 2 8.00 16 12 2 2
.................................................................TTCAAGCAATCCAGGATAGGCTT...................................................................................................... 23 2 3 7.67 23 23 0 0
.................................................................TTCAAGTAATCCAGCATAGGCTTT..................................................................................................... 24 2 2 7.50 15 9 1 5
.................................................................TTCAAGTAATCCAGGATAGGCTTCA.................................................................................................... 25 3 2 7.50 15 15 0 0
......................................................................GTAATCCAGGATAGGCTAT..................................................................................................... 19 1 2 7.50 15 14 1 0
.................................................................TTCAAGTACTCCAGGATAGGCTAA..................................................................................................... 24 3 5 7.40 37 37 0 0
.................................................................TTCAAGTAATCCAGGACAGGCTT...................................................................................................... 23 2 3 7.33 22 22 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTATAC................................................................................................... 26 2 1 7.00 7 7 0 0
.................................................................TTCAAGTAATCAAGGATAGGCTCT..................................................................................................... 24 2 2 7.00 14 14 0 0
...............................................................TTTTCAAGTAATCCAGGATAGGC........................................................................................................ 23 1 1 7.00 7 7 0 0
.................................................................TACAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 7.00 14 11 3 0
.................................................................TTCAAGTAATCCAGGATATGCTAT..................................................................................................... 24 2 2 7.00 14 13 1 0
.................................................................TTCAAGTAATCCAGGATAAGCTA...................................................................................................... 23 2 2 7.00 14 14 0 0
.................................................................TTACAGTAATCCAGGATAGGCTA...................................................................................................... 23 3 4 7.00 28 28 0 0
.................................................................TCCAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 7.00 14 11 3 0
.................................................................TTTAAGTAATCCAGGATAGGCTT...................................................................................................... 23 2 2 7.00 14 13 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTTTAC................................................................................................... 26 2 1 7.00 7 7 0 0
...............................................................TTTTCAAGTAATCCAGGATAGGCT....................................................................................................... 24 1 1 7.00 7 7 0 0
.................................................................TTCAAGTAATCCAGGATATGCT....................................................................................................... 22 1 2 7.00 14 13 1 0
.................................................................TTCGAGTAATCCAGGATAGGCTT...................................................................................................... 23 2 2 7.00 14 14 0 0
...................................................................CAAGTAATCCAGGATAGGCTAT..................................................................................................... 22 1 2 7.00 14 14 0 0
.................................................................TTCAAGTACTCCAGGATAGGCG....................................................................................................... 22 2 3 6.67 20 20 0 0
.................................................................TTAAAGTAATCCAGGATAGGCTA...................................................................................................... 23 2 2 6.50 13 13 0 0
.................................................................TTCAAGTAATCTAGGATAGGCTTT..................................................................................................... 24 2 2 6.50 13 13 0 0
.................................................................TTCAAGTAATCCGGGATAGGCT....................................................................................................... 22 1 2 6.50 13 12 0 1
.................................................................TTCAAGCAATCCAGGATAGGCTTT..................................................................................................... 24 2 2 6.50 13 13 0 0
................................................................TTTCAAGTAATCCAGGATAGGCTA...................................................................................................... 24 2 2 6.50 13 13 0 0
.................................................................TTCAAGTAATCCACGATAGGCTAA..................................................................................................... 24 3 2 6.50 13 13 0 0
..................................................................TCAAGTAATCCAGGATAGGCTAC..................................................................................................... 23 2 2 6.50 13 13 0 0
.................................................................TTAAAGTAATCCAGGATAGGCTTT..................................................................................................... 24 2 2 6.50 13 12 1 0
.................................................................TTCAAGTCATCCAGGATAGGCTT...................................................................................................... 23 2 4 6.25 25 25 0 0
.................................................................TTAAAGTAATCCAGGATAGGCTAT..................................................................................................... 24 2 2 6.00 12 12 0 0
.................................................................TTTAAGTAATCCAGGATAGGCTA...................................................................................................... 23 2 2 6.00 12 12 0 0
.....................................................................AGTAATCCAGGATAGGCTTTTCA.................................................................................................. 23 2 1 6.00 6 6 0 0
..................................................................TCAAGTAATCCAGGATAGGCAAT..................................................................................................... 23 2 2 6.00 12 12 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTGC..................................................................................................... 24 1 2 6.00 12 12 0 0
.................................................................TTCAAGTAATCCAGGATATGCTT...................................................................................................... 23 2 2 6.00 12 11 0 1
.................................................................TTCAAGTAATCCAGGAAAGGCTAT..................................................................................................... 24 2 2 6.00 12 12 0 0
.................................................................TTCAAGTAATCCAGGATAGGCATTA.................................................................................................... 25 3 3 6.00 18 18 0 0
..............................................................TTTTTCAAGTAATCCAGGATAGGCT....................................................................................................... 25 1 1 6.00 6 6 0 0
................................................................TTTCAAGTAATCCAGGATAGGCT....................................................................................................... 23 1 2 6.00 12 11 1 0
.................................................................TTCTAGTACTCCAGGATAGGCT....................................................................................................... 22 2 3 6.00 18 18 0 0
.................................................................TTCAAGTAACCCAGGATAGGCTAT..................................................................................................... 24 2 2 6.00 12 12 0 0
.................................................................TTCAAGTACTCCAGGATAGGCGAT..................................................................................................... 24 3 2 6.00 12 12 0 0
..................................................................TCAAGTAATCCAGGCTAGGCT....................................................................................................... 21 1 2 6.00 12 11 1 0
.................................................................TTTCAGTAATCCAGGATAGGCTAT..................................................................................................... 24 3 3 5.67 17 17 0 0
.................................................................TTCAAGTAATCCAGGATAGA......................................................................................................... 20 1 3 5.67 17 12 5 0
.................................................................TTCACGTAATCCAGGATAGGCTA...................................................................................................... 23 2 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCCAGGATAGGTAA...................................................................................................... 23 3 8 5.50 44 44 0 0
.................................................................TTTAAGTAATCCAGGATAGGCT....................................................................................................... 22 1 2 5.50 11 10 1 0
.................................................................TTCAAGTAATCCAGGATAGGCTATAG................................................................................................... 26 3 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCCAGGATAGGCGTT..................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCCATGATAGGCTAT..................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCCAGGATGGGCT....................................................................................................... 22 1 2 5.50 11 10 1 0
.................................................................TTCAAGTAATCCAGGATAGGATA...................................................................................................... 23 2 2 5.50 11 11 0 0
.................................................................GTCAAGTAATCCAGGATAGGCTTT..................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCCAGAATAGGCTA...................................................................................................... 23 2 2 5.50 11 11 0 0
.................................................................TTCACGTAATCCAGGATAGGCTT...................................................................................................... 23 2 2 5.50 11 11 0 0
.................................................................TTCAAGAAATCCAGGATAGGCT....................................................................................................... 22 1 2 5.50 11 10 0 1
.................................................................TTCAAGTAATCAAGGATAGGCTG...................................................................................................... 23 1 2 5.50 11 11 0 0
.....................................................................AGTAATCCAGGATAGGCTAT..................................................................................................... 20 1 2 5.50 11 9 0 2
.................................................................TTCAAGTAATCCAGGACAGGCTA...................................................................................................... 23 2 2 5.50 11 9 0 2
....................................................................AAGTAATCCAGGATAGGC........................................................................................................ 18 0 2 5.50 11 7 4 0
.................................................................ATCAAGTAATCCAGGATAGGCTA...................................................................................................... 23 2 2 5.50 11 11 0 0
.................................................................TTCAAGTAATCAAGGATAGGCTGT..................................................................................................... 24 1 2 5.50 11 11 0 0
.....................................................................AGTAATCCAGGATAGGCTA...................................................................................................... 19 1 3 5.33 16 13 1 2
.................................................................TTCAAGTAATCCAGGATAAGCTT...................................................................................................... 23 2 3 5.33 16 15 0 1
....................................................................AAGTAATCCAGGATAGGCTTTC.................................................................................................... 22 2 3 5.33 16 16 0 0
.................................................................TTCAAGTAATTCAGGATAGGCTTT..................................................................................................... 24 2 3 5.33 16 16 0 0
.................................................................TTCAAGTAATCCAGGATAGGTTAA..................................................................................................... 24 3 4 5.25 21 21 0 0
.......................................................................TAATCCAGGATAGGCTAT..................................................................................................... 18 1 4 5.25 21 21 0 0
.................................................................TTCAAGTACTCCAGGATAGGCC....................................................................................................... 22 2 5 5.00 25 23 0 2
.................................................................TTCAAGTAATCCAGGATAAGCTTT..................................................................................................... 24 2 2 5.00 10 10 0 0
.................................................................TTCAAGTAATCCAGGACAGGCTTT..................................................................................................... 24 2 2 5.00 10 10 0 0
.................................................................TTCAAGTAATCCCGGATAGGCTA...................................................................................................... 23 2 2 5.00 10 10 0 0
.................................................................TTCAAGTAATCCGGGATAGGCTAT..................................................................................................... 24 2 2 5.00 10 10 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTAGG.................................................................................................... 25 2 1 5.00 5 5 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTATC.................................................................................................... 25 2 2 5.00 10 10 0 0
.................................................................TTCACGTAATCCAGGATAGGCTAT..................................................................................................... 24 2 2 5.00 10 10 0 0
.................................................................CTCAAGTAATCCAGGATAGGCTTT..................................................................................................... 24 2 2 5.00 10 10 0 0
.................................................................TTCAAGTAATCCAGGATAGGCTGTAAT.................................................................................................. 27 3 2 5.00 10 10 0 0
................................................................GTTCAAGTAATCCAGGATAGGCTT...................................................................................................... 24 1 1 5.00 5 5 0 0

Anti-sense strand reads

TTGAGGTCTCTCTTCCTTCCGTGTTTTCGACCTCCCGGTTCCGGGACCGCTTCCGGCACCGGAACAAGTTCATTAGGTCCTATCCGACACGTCCAGGGTTCCCCGGATAAGAACCAATGAACGTGCCCCTGCGCCCGGACCTGCGGACGTAGGCCCGGGTCCTAGGAGGAAAGACATTTCCGCCGTTGTA
***********************************.((........((((.((((((((.((((((.(((((((((.((((((((((...............)))))))))).))))))))).)))))).))))).)))...)))).......))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:50 PM