ID:

rno-mir-24-1

 Coordinate:

chr17:823968-824035 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-28.1 -27.5 -27.4
mature
  1. chr17:824011-824032 +
  2. chr19:25318923-25318944 +
star

Sense Strand Reads

GATGCCCAGGGCACGCCAGGAGGCACTGCCCAGCTGTGATTGGACCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAGCCCTTGAGCAAAAAGCCTACCCATCTGTAAGTGCCTGAGGCAGGC
****************************************.((...((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))...))....************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.............................................................................................TGGCTCAGTTCAGCAGGAACAGT.................................................... 23 1 2 9941.00 19882 19063 556 263
.............................................................................................TGGCTCAGTTCAGCAGGAACAGA.................................................... 23 1 2 1526.00 3052 2969 73 10
.............................................................................................TGGCTCAGTTCAGCAGGAACAG..................................................... 22 0 2 1436.50 2873 2636 223 14
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTT................................................... 24 2 2 790.50 1581 1543 17 21
..............................................................................................GGCTCAGTTCAGCAGGAACAGT.................................................... 22 1 2 534.50 1069 1047 22 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTA................................................... 24 1 2 458.50 917 899 8 10
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAT.................................................. 25 2 2 295.00 590 586 2 2
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAA.................................................. 25 2 2 218.50 437 426 2 9
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTT.................................................. 25 3 2 210.00 420 410 4 6
............................................................................................ATGGCTCAGTTCAGCAGGAACAGT.................................................... 24 2 2 205.50 411 383 22 6
.............................................................................................TGGCTCAGTTCAGCAGGAACA...................................................... 21 0 2 135.50 271 235 36 0
.............................................................................................TGGCTCAGTTCAGCAGGAAC....................................................... 20 0 2 113.50 227 146 81 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAA................................................... 24 1 2 102.00 204 202 1 1
.............................................................................................TGGCTCAGTTCAGCAGGACCAGT.................................................... 23 2 2 74.00 148 144 0 4
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAT................................................... 24 2 2 73.50 147 143 2 2
..............................................................................................GGCTCAGTTCAGCAGGAACAGA.................................................... 22 1 2 69.50 139 135 4 0
..............................................................................................GGCTCAGTTCAGCAGGAACAG..................................................... 21 0 2 67.00 134 129 4 1
...............................................................................................GCTCAGTTCAGCAGGAACAGTT................................................... 22 2 2 61.50 123 122 1 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGT................................................... 22 1 2 54.50 109 106 3 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAA..................................................... 22 1 2 47.50 95 84 10 1
.............................................................................................TGGCTCAGTTCAGCAGGAACAGG.................................................... 23 0 2 44.50 89 87 1 1
.............................................................................................TGGCTCAGTTCAGCAGGAACAAA.................................................... 23 2 2 44.50 89 86 2 1
..............................................................................................GGCTCAGTTCAGCAGGAACAGTT................................................... 23 2 2 43.50 87 86 1 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGT.................................................... 23 2 3 40.67 122 118 2 2
.............................................................................................TGGCTCAGTTCAGCAGGAACACT.................................................... 23 2 2 40.00 80 80 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTA................................................... 23 1 2 40.00 80 80 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTA.................................................. 25 3 2 36.50 73 73 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGT.................................................... 21 1 2 36.00 72 70 2 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTTT................................................. 26 3 2 33.50 67 58 0 9
.............................................................................................TGGCTCAGTTCAGCAGGAACAGC.................................................... 23 1 2 32.50 65 61 4 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTAT................................................. 26 3 2 32.00 64 59 1 4
.............................................................................................TGGCTCAGTTCCGCAGGAACAGT.................................................... 23 2 2 30.50 61 61 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTAT.................................................. 24 2 2 29.00 58 58 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAA........................................................ 19 0 2 28.50 57 36 21 0
.............................................................................................TGGCTCAGTTAAGCAGGAACAGT.................................................... 23 2 2 28.00 56 52 1 3
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGT................................................... 24 1 2 27.00 54 54 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAAT.................................................... 23 2 3 26.67 80 78 0 2
...............................................................................................GCTCAGTTCAGCAGGAACAGGA................................................... 22 0 2 26.50 53 47 5 1
...............................................................................................GCTCAGTTCAGCAGGAACAGGTT.................................................. 23 2 2 25.50 51 51 0 0
.......................................................GTGCCTACTGAGCTGATATCAGT.......................................................................................... 23 0 1 25.00 25 20 5 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAAA.................................................. 25 2 2 24.00 48 48 0 0
.............................................................................................TGGATCAGTTCAGCAGGAACAGT.................................................... 23 2 2 23.50 47 44 0 3
.............................................................................................TGGCTCAGTTCAGAAGGAACAGT.................................................... 23 2 4 21.75 87 87 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGA.................................................... 24 2 2 20.50 41 38 3 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGTA.................................................. 23 2 2 20.00 40 40 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAG..................................................... 23 1 2 19.50 39 33 6 0
.............................................................................................TGGCTCAGTTCAGTAGGAACAGT.................................................... 23 2 2 19.50 39 35 0 4
..............................................................................................GGCTCAGTTCAGCAGGAACAGTAA.................................................. 24 2 2 19.00 38 37 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAAA....................................................... 20 1 3 17.67 53 45 8 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAAA................................................. 26 3 2 17.00 34 34 0 0
.............................................................................................TGGCTCAGCTCAGCAGGAACAGT.................................................... 23 2 2 17.00 34 33 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACATT.................................................... 23 2 2 16.50 33 33 0 0
........................................................TGCCTACTGAGCTGATATCAGT.......................................................................................... 22 0 1 16.00 16 16 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACCG..................................................... 22 1 2 16.00 32 2 0 30
...............................................................................................GCTCAGTTCAGCAGGAACAGTAT.................................................. 23 2 2 16.00 32 32 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGTT................................................... 25 3 2 16.00 32 31 1 0
...........................................................................................AATGGCTCAGTTCAGCAGGAACAGT.................................................... 25 2 2 15.50 31 30 1 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGTAT................................................. 24 2 2 15.50 31 31 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAAT................................................. 26 2 2 14.00 28 24 0 4
.............................................................................................TGGCTCAGTTCAGCAGGAACACA.................................................... 23 2 2 14.00 28 28 0 0
................................................................................................CTCAGTTCAGCAGGAACAGT.................................................... 20 1 2 13.00 26 19 7 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAAT.................................................. 25 2 2 13.00 26 26 0 0
......................................................GGTGCCTACTGAGCTGATATCAG........................................................................................... 23 0 1 13.00 13 13 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGAT.................................................. 23 1 2 12.50 25 25 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTTT.................................................. 23 3 13 12.23 159 159 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGTTT................................................. 24 2 2 12.00 24 24 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAC..................................................... 22 1 2 12.00 24 20 4 0
.............................................................................................TGGCTCAGTTCAGCAGGAACCGT.................................................... 23 2 2 12.00 24 24 0 0
.............................................................................................TGGCTCAGATCAGCAGGAACAGT.................................................... 23 2 2 12.00 24 22 0 2
.............................................................................................TGACTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 11.50 23 20 1 2
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTG................................................... 24 2 2 11.50 23 23 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGAA.................................................. 23 1 2 11.00 22 22 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGAAT.................................................. 23 2 2 11.00 22 22 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAT..................................................... 22 1 2 10.50 21 21 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGA.................................................... 21 1 2 10.50 21 20 1 0
.............................................................................................TGGCTCCGTTCAGCAGGAACAGT.................................................... 23 2 2 10.50 21 21 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAG.................................................. 25 1 2 10.00 20 20 0 0
.........................................................................................AAAATGGCTCAGTTCAGCAGGAACAGT.................................................... 27 3 1 10.00 10 10 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAG..................................................... 20 0 2 10.00 20 19 1 0
......................................................GGTGCCTACTGAGCTGATATCA............................................................................................ 22 0 1 10.00 10 10 0 0
.............................................................................................CGGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 9.50 19 19 0 0
.............................................................................................TGGCTCAGTTCAGCAGAAACAGT.................................................... 23 2 2 9.50 19 19 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAAT....................................................... 20 1 2 9.00 18 14 4 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTC................................................... 24 2 2 9.00 18 18 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGA................................................... 24 0 2 9.00 18 17 1 0
.......................................................GTGCCTACTGAGCTGATATCA............................................................................................ 21 0 1 9.00 9 9 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTGT.................................................. 25 3 2 9.00 18 17 1 0
.......................................................GTGCCTACTGAGCTGATATCAG........................................................................................... 22 0 1 9.00 9 8 1 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGA.................................................... 23 2 2 8.50 17 16 1 0
.............................................................................................TGGCTCAGTTCGGCAGGAACAGT.................................................... 23 2 2 8.50 17 17 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAAAA................................................... 24 2 2 8.50 17 17 0 0
.............................................................................................TGGCTCAGTTCAGGAGGAACAGT.................................................... 23 2 2 8.50 17 17 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGCG................................................... 24 2 2 8.00 16 0 0 16
.............................................................................................TGGCTCAGGTCAGCAGGAACAGT.................................................... 23 2 3 8.00 24 22 0 2
..............................................................................................GGCTCAGTTCAGCAGGAACAGTTT.................................................. 24 3 4 7.75 31 31 0 0
.............................................................................................TGGCTCAGTTCCGCCGGAACAGT.................................................... 23 3 4 7.75 31 30 0 1
...............................................................................................GCTCAGTTCAGCAGGAACAGAA................................................... 22 1 2 7.50 15 15 0 0
.............................................................................................AGGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 7.50 15 15 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAGA.................................................... 23 2 2 7.50 15 15 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGG.................................................... 21 0 2 7.50 15 15 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAGTA................................................... 24 2 2 7.00 14 14 0 0
..............................................................................................GGCTCAGTTCAGCCGGAACAGT.................................................... 22 2 3 6.67 20 20 0 0
............................................................................................ATGTCTCAGTTCAGCAGGAACAGT.................................................... 24 3 3 6.67 20 20 0 0
.............................................................................................TGGCTCAGTTCAGAAGGAACAGA.................................................... 23 2 2 6.50 13 12 0 1
...............................................................................................GCTCAGTTCAGCAGGAACAGTA................................................... 22 1 2 6.50 13 12 1 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGTA................................................... 25 2 2 6.50 13 13 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAG..................................................... 22 1 2 6.50 13 12 0 1
...............................................................................................GCTCAGTTCAGCAGGAACAGGTAA................................................. 24 3 4 6.50 26 26 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTATT................................................. 26 2 2 6.50 13 13 0 0
..............................................................................................GGCTCAGTTCAGCAGGAAC....................................................... 19 0 2 6.50 13 9 4 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTCG.................................................. 25 2 2 6.50 13 0 0 13
.............................................................................................TGGCTCAGTTTAGCAGGAACAGT.................................................... 23 2 4 6.25 25 24 0 1
.............................................................................................TGGCTCAATTCAGCAGGAACAGT.................................................... 23 2 2 6.00 12 12 0 0
.............................................................................................TGGCTCAGTTCAGAAGGAACAG..................................................... 22 1 2 6.00 12 12 0 0
.............................................................................................TTGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 6.00 12 12 0 0
............................................................................................TTGGCTCAGTTCAGCAGGAACAG..................................................... 23 1 2 6.00 12 11 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAAGA................................................... 24 1 2 6.00 12 12 0 0
.............................................................................................TGGCTCAGTTGAGCAGGAACAGT.................................................... 23 2 3 5.67 17 14 3 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGTT................................................... 24 3 3 5.67 17 16 0 1
.............................................................................................TGTCTCAGTTCAGCAGGAACAGT.................................................... 23 2 3 5.67 17 11 6 0
............................................................................................CTGGCTCAGTTCAGCAGGAACAGT.................................................... 24 1 2 5.50 11 10 1 0
.................................................................................................TCAGTTCAGCAGGAACAGT.................................................... 19 1 4 5.50 22 20 2 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGAA................................................... 23 1 2 5.50 11 11 0 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAG..................................................... 22 1 2 5.50 11 11 0 0
.............................................................................................TGGTTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 5.50 11 10 1 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTTA.................................................. 23 3 9 5.11 46 46 0 0
.............................................................................................TGGCTCGGTTCAGCAGGAACAGT.................................................... 23 2 2 5.00 10 9 0 1
........................................................TGCCTACTGAGCTGATATCA............................................................................................ 20 0 1 5.00 5 5 0 0
.............................................................................................TGGCTCAGTTCACCAGGAACAGT.................................................... 23 2 2 5.00 10 10 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGC.................................................... 22 1 2 5.00 10 9 1 0
.............................................................................................TGCCTCAGTTCAGCAGGAACAGT.................................................... 23 2 3 5.00 15 13 2 0
.............................................................................................TGGCTCAGTTCCGCAGGAACAG..................................................... 22 1 2 5.00 10 9 1 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTAA.................................................. 23 2 3 5.00 15 15 0 0
.............................................................................................TGGCTCAGTTCCGCAGGAACAGA.................................................... 23 2 3 5.00 15 15 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTTTT................................................. 24 3 5 4.80 24 24 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACT...................................................... 21 1 2 4.50 9 9 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAGT................................................. 26 1 2 4.50 9 4 0 5
.............................................................................................TGGCTCAGTTCAGCAGGAACAGCT................................................... 24 2 2 4.50 9 9 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACATA.................................................... 23 2 2 4.50 9 9 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGAAA.................................................. 23 2 2 4.50 9 9 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACA...................................................... 20 0 2 4.50 9 7 2 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGG.................................................... 22 0 2 4.50 9 8 0 1
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAAAA................................................. 26 3 2 4.50 9 9 0 0
.............................................................................................TGGGTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 4.00 8 8 0 0
.............................................................................................TGGCTCAGTTCAGCAGGCACAGT.................................................... 23 2 3 4.00 12 10 1 1
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTGA.................................................. 25 3 4 4.00 16 16 0 0
......................................................GGTGCCTACTGAGCTGATATCAGT.......................................................................................... 24 0 1 4.00 4 3 1 0
.............................................................................................TGGATCAGTTCAGCCGGAACAGT.................................................... 23 3 3 4.00 12 12 0 0
.............................................................................................TCGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 4.00 8 7 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAATA................................................... 24 2 2 4.00 8 8 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTAC.................................................. 25 2 2 4.00 8 8 0 0
......................................................AGTGCCTACTGAGCTGATATCAGT.......................................................................................... 24 1 1 4.00 4 4 0 0
.............................................................................................TAGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 3 3.67 11 10 1 0
.............................................................................................TGGCTCAGTTCAGCAGCAACAGT.................................................... 23 2 3 3.67 11 10 0 1
..........................................................................................AAATGGCTCAGTTCAGCAGGAACAGT.................................................... 26 3 2 3.50 7 7 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTTAT................................................. 25 3 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTAAGCAGGAACAG..................................................... 22 1 2 3.50 7 7 0 0
.............................................................................................GGGCTCAGTTCAGCAGGAACAGT.................................................... 23 2 2 3.50 7 4 1 2
.............................................................................................TGGCTCAGTTCAGCAGGAAAAGT.................................................... 23 2 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACACTA................................................... 24 2 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTCCGCAGGAACAGTT................................................... 24 3 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAGTAA.................................................. 25 3 2 3.50 7 6 0 1
.............................................................................................TGGCTCAGTTCCGCAGGAACAGG.................................................... 23 1 2 3.50 7 6 0 1
..............................................................................................GGCTCAGTTCAGCAGGAACAGGA................................................... 23 0 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTCAGCACGAACAGT.................................................... 23 2 2 3.50 7 6 1 0
...........................................................................................AATGGCTCAGTTCAGCAGGAACAG..................................................... 24 1 2 3.50 7 6 0 1
.............................................................................................TGGCTCAGTTCAGCAGGAACAAG.................................................... 23 1 2 3.50 7 7 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAAAA...................................................... 21 1 3 3.33 10 7 3 0
..................................................................................................CAGTTCAGCAGGAACAGT.................................................... 18 1 9 3.22 29 19 10 0
............................................................................................ATGGCTCAGTTCAGCAGGAACA...................................................... 22 1 2 3.00 6 3 3 0
...............................................................................................GCTCAGTTCAGCAGGAACAGCTTT................................................. 24 3 2 3.00 6 6 0 0
.............................................................................................TGGCTCAGTTCCGCAGGAACAGTA................................................... 24 2 2 3.00 6 5 0 1
........................................................TGCCTACTGAGCTGATATCAG........................................................................................... 21 0 1 3.00 3 3 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGTAA.................................................. 26 3 2 3.00 6 6 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGTA.................................................. 25 2 2 3.00 6 6 0 0
.............................................................................................TGCCTCAGTTCAGCAGGAACAGA.................................................... 23 2 2 3.00 6 6 0 0
................................................................................................CTCAGTTCAGCAGGAACAG..................................................... 19 0 2 3.00 6 4 2 0
.............................................................................................TGGCTCAGTTCTGCAGGAACAGT.................................................... 23 2 4 3.00 12 12 0 0
.......................................................GTGCCTACTGAGCTGATATC............................................................................................. 20 0 1 3.00 3 3 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGTAT.................................................. 26 3 2 3.00 6 6 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGAT................................................... 23 2 2 3.00 6 5 1 0
.............................................................................................TGGCTCACTTCAGCAGGAACAGT.................................................... 23 2 2 3.00 6 6 0 0
.............................................................................................TAGCTCAGTTCAGCAGGAACAGA.................................................... 23 2 2 3.00 6 6 0 0
.............................................................................................TGGCTCAGTTCAGCGGGAACAGT.................................................... 23 2 3 2.67 8 8 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTCA.................................................. 25 3 3 2.67 8 8 0 0
.............................................................................................TGGCTCAGGTCAGCAGGAACAGA.................................................... 23 2 3 2.67 8 8 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGGT................................................... 23 1 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACGGT.................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGCA................................................... 24 1 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTC.................................................. 25 3 2 2.50 5 5 0 0
...........................................................................................AATGGCTCAGTTCAGCAGGAA........................................................ 21 1 2 2.50 5 5 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAA..................................................... 21 1 2 2.50 5 3 2 0
.............................................................................................TGGCTCCGTTCAGCAGGAACAGA.................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................TGGCACAGTTCAGCAGGAACAGT.................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGA......................................................... 18 0 2 2.50 5 2 3 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGTT.................................................. 25 2 2 2.50 5 5 0 0
............................................................................................CTGGCTCAGTTCAGCAGGAACAGA.................................................... 24 1 2 2.50 5 4 1 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGAT................................................... 24 3 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAGCAGT.................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAGTT................................................... 24 3 4 2.50 10 10 0 0
.............................................................................................TGGCTCAGTTCCGCCGGAACAG..................................................... 22 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGAC................................................... 24 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGCTCAGCAGGAACAG..................................................... 22 1 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAAGAACAGT.................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................TGGCTCAGTTTAGCAGGAACAGA.................................................... 23 2 2 2.50 5 4 1 0
.............................................................................................TGGCTCAGTTCCGCCGGAACAGA.................................................... 23 3 3 2.33 7 7 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTTA.................................................. 24 3 3 2.33 7 7 0 0
.............................................................................................TGGCTCAGTTCCGCAGGAACAGC.................................................... 23 2 3 2.33 7 6 0 1
.............................................................................................TGGCTCAGTTCAGCAGGAAAAA..................................................... 22 2 4 2.25 9 7 2 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGATT................................................. 24 1 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGTTT................................................. 26 2 2 2.00 4 4 0 0
.............................................................................................TGGATCAGTTCAGCCGGAACAG..................................................... 22 2 2 2.00 4 4 0 0
........................................................................................CAAAATGGCTCAGTTCAGCAGGAACAGA.................................................... 28 3 1 2.00 2 2 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGATAT................................................. 26 3 2 2.00 4 4 0 0
..............................................................................................GGCTCAGTTCCGCAGGAACAGT.................................................... 22 2 2 2.00 4 4 0 0
.............................................................................................TGCCTCAGTTCAGCAGGAACAG..................................................... 22 1 2 2.00 4 3 1 0
.............................................................................................TGGTTCAGTTCAGCCGGAACAGT.................................................... 23 3 5 2.00 10 10 0 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGAA................................................... 24 2 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACTT..................................................... 22 2 2 2.00 4 4 0 0
............................................................................................TTGGCTCAGTTCAGCAGGAACAGT.................................................... 24 2 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGCAGTAACAGT.................................................... 23 2 3 2.00 6 6 0 0
.............................................................................................TGGCCCAGTTCAGCAGGAACAG..................................................... 22 1 2 2.00 4 4 0 0
.............................................................................................TGGCCCAGTTCAGCAGGAACAGT.................................................... 23 2 2 2.00 4 4 0 0
.......................................................GTGCCTACTGAGCTGATATCAGTT......................................................................................... 24 0 1 2.00 2 2 0 0
.............................................................................................TGGCTCAGTTAAGCAGGAACAGTA................................................... 24 2 2 2.00 4 4 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAAAA................................................... 25 3 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCATCAGGAACAGT.................................................... 23 2 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACTGT.................................................... 23 2 2 2.00 4 4 0 0
...........................................................................................AATGGCTCAGTTCAGCAGGAACAGTT................................................... 26 3 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACACAA................................................... 24 2 2 2.00 4 4 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGAA................................................... 25 2 2 2.00 4 4 0 0
........................................................................................CAAAATGGCTCAGTTCAGCAGGAACAGT.................................................... 28 3 1 2.00 2 2 0 0
.............................................................................................TGGCTCAGTTCAGGAGGAACAGA.................................................... 23 2 2 2.00 4 4 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAAA.................................................... 22 2 2 2.00 4 4 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGATAA................................................ 25 3 2 2.00 4 4 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTTAT................................................. 24 3 3 2.00 6 6 0 0
.............................................................................................TGGCTCAGTTCAGCGGGAACAG..................................................... 22 1 2 2.00 4 3 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGATT.................................................. 25 3 2 2.00 4 4 0 0
.............................................................................................TGGCTCAGTTCAGAAGGAACAGTA................................................... 24 2 2 2.00 4 4 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGAT................................................... 22 2 3 2.00 6 6 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTTTT................................................. 25 3 4 1.75 7 7 0 0
.............................................................................................TGGCTCATTTCAGCAGGAACAGT.................................................... 23 2 4 1.75 7 6 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAAAT................................................... 24 3 4 1.75 7 7 0 0
.............................................................................................TGGCTTAGTTCAGCAGGAACAGT.................................................... 23 2 3 1.67 5 5 0 0
.............................................................................................TGTCTCAGTTCAGCAGGAACAGA.................................................... 23 2 3 1.67 5 5 0 0
................................................................................................CTCAGTTCAGCAGGAACAGGTT.................................................. 22 2 3 1.67 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCCGGAACAGTA................................................... 24 2 3 1.67 5 5 0 0
.............................................................................................TGGATCAGTTCAGCAGGAACAGA.................................................... 23 2 3 1.67 5 5 0 0
.............................................................................................TGGCTCAGCTCAGCAGGAACAGA.................................................... 23 2 3 1.67 5 5 0 0
...........................................................................................GTTGGCTCAGTTCAGCAGGAACA...................................................... 23 2 3 1.67 5 5 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTCT.................................................. 25 3 3 1.67 5 5 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAAC....................................................... 21 1 2 1.50 3 0 3 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTG.................................................. 25 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGTTGA................................................. 26 3 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCA...................................................... 21 1 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGATCG...................................................... 21 2 4 1.50 6 0 0 6
.............................................................................................TGGCTCAGATCAGCAGGAACAGA.................................................... 23 2 4 1.50 6 6 0 0
.............................................................................................TGGCTCAGTTGAGCAGGAACAG..................................................... 22 1 2 1.50 3 2 1 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGATTT................................................. 26 3 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGCAA.................................................. 25 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGTTTT................................................ 27 3 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGAACAGGAT.................................................. 25 1 2 1.50 3 3 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTAAA................................................. 25 3 2 1.50 3 3 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGAAT.................................................. 24 2 2 1.50 3 3 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGAAAT................................................. 24 2 2 1.50 3 3 0 0
.............................................................................................TGACTCAGTTCAGCAGGAACAG..................................................... 22 1 2 1.50 3 3 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGGCA.................................................. 23 2 2 1.50 3 2 1 0
................................................................................................CTCAGTTCAGCAGGAACAGTA................................................... 21 1 2 1.50 3 3 0 0
.............................................................................................TGGCTAAGTTCAGCAGGAACAGT.................................................... 23 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTAAGCAGGAACAGA.................................................... 23 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGCAACAGA.................................................... 23 2 2 1.50 3 3 0 0
.............................................................................................TGGCTAAGTTCAGCAGGAACAGAA................................................... 24 2 2 1.50 3 3 0 0
.............................................................................................TTGCTCAGTTCAGCAGGAACAG..................................................... 22 1 2 1.50 3 1 2 0
.............................................................................................TGGTTCAGTTCAGCAGGAACAG..................................................... 22 1 2 1.50 3 2 1 0
............................................................................................CTGGCTCAGTTCAGCAGGAACA...................................................... 22 0 2 1.50 3 1 2 0
.................................................................................................TCAGTTCAGCAGGAACAG..................................................... 18 0 2 1.50 3 3 0 0
.............................................................................................TCGCTCAGTTCAGCAGGAACAG..................................................... 22 1 2 1.50 3 1 2 0
...............................................................................................GCTCAGTTCAGCAGGAACAGATG.................................................. 23 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGTAGGAACAG..................................................... 22 1 2 1.50 3 3 0 0
.............................................................................................TGCCTCAGTTCAGCAGGAACAGTAT.................................................. 25 3 2 1.50 3 3 0 0
..........................................................................................AAATGGCTCAGTTCAGCAGGAACAGTA................................................... 27 3 2 1.50 3 3 0 0
..................................................................................................CAGTTCAGCAGGAACAG..................................................... 17 0 2 1.50 3 1 2 0
...........................................................................................AATGGCTCAGTTCCGCAGGAACAGT.................................................... 25 3 2 1.50 3 3 0 0
..............................................................................................GGCTCAGTTCAGCAGGAAAAGT.................................................... 22 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGTAGGAACAGA.................................................... 23 2 2 1.50 3 3 0 0
..............................................................................................GTCTCAGTTCAGCAGGAACAG..................................................... 21 1 2 1.50 3 3 0 0
..........................................................................................AAATGGCTCAGTTCAGCAGGAACAGA.................................................... 26 3 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGGAGGAACAG..................................................... 22 1 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTCCAGCAGGAACAG..................................................... 22 1 2 1.50 3 3 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGAC................................................... 22 2 2 1.50 3 3 0 0
............................................................................................ATGGCTCAGTTCAGCAGGAACAGAAT.................................................. 26 3 2 1.50 3 3 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACAGTAAT................................................. 25 2 2 1.50 3 3 0 0
..............................................................................................GGCTCAGTTCAGCAGGAACATT.................................................... 22 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGATCAGCAGGAACAG..................................................... 22 1 2 1.50 3 3 0 0
...............................................................................................GCTCAGTTCAGCAGGAACAGTTG.................................................. 23 2 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGGAGGAACAGTT................................................... 24 3 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCAGTAT.................................................. 25 3 2 1.50 3 3 0 0
...........................................................................................ACTGGCTCAGTTCAGCAGGAACAG..................................................... 24 0 2 1.50 3 3 0 0
.............................................................................................TGGCTCAGTTCAGCAGGACCCG..................................................... 22 2 2 1.50 3 0 0 3
.............................................................................................TGGCTCAGTTCAGAAGGAACAGTT................................................... 24 3 5 1.40 7 6 0 1
.............................................................................................TGGCTCAGTTCAGCAGGAACTAAA................................................... 24 3 3 1.33 4 4 0 0

Anti-sense strand reads

CTACGGGTCCCGTGCGGTCCTCCGTGACGGGTCGACACTAACCTGGGCGGGAGGCCACGGATGACTCGACTATAGTCAAGAGTAAAGTGTGTGACCGAGTCAAGTCGTCCTTGTCCTCAGCTCGGGAACTCGTTTTTCGGATGGGTAGACATTCACGGACTCCGTCCG
**************************************.((...((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))...))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
....................................................TGCCACGGATGACTCGACTATAG............................................................................................. 23 1 1 52.00 52 49 3
...................................................TTGCCACGGATGACTCGACTATAG............................................................................................. 24 2 1 26.00 26 26 0
..................................................TTTGCCACGGATGACTCGACTATAG............................................................................................. 25 3 1 14.00 14 14 0
..................................................ATTGCCACGGATGACTCGACTATAG............................................................................................. 25 3 1 12.00 12 12 0
....................................................AGCCACGGATGACTCGACTATAG............................................................................................. 23 1 1 11.00 11 10 1
..................................................TATGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 10.00 10 10 0
....................................................AGCCACGGATGACTCGACTATAGT............................................................................................ 24 1 1 6.00 6 6 0
...................................................ATGCCACGGATGACTCGACTATAG............................................................................................. 24 1 1 6.00 6 6 0
..................................................AATGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 5.00 5 5 0
....................................................TGCCACGGATGACTCGACTATAGT............................................................................................ 24 1 1 5.00 5 5 0
....................................................TGCCACGGATGACTCGACTATA.............................................................................................. 22 1 1 5.00 5 4 1
...................................................TGGCCACGGATGACTCGACTATAG............................................................................................. 24 1 1 3.00 3 3 0
..................................................TTTGCCACGGATGACTCGACTATAGT............................................................................................ 26 3 1 3.00 3 3 0
..................................................TGTGCCACGGATGACTCGACTATAG............................................................................................. 25 3 1 3.00 3 3 0
.................................................AAATGCCACGGATGACTCGACTATAG............................................................................................. 26 3 1 3.00 3 3 0
...........................................................................................TGACCGAGTCAAGTCGTCCTTG....................................................... 22 0 2 2.50 5 1 4
..................................................TAAGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 2.00 2 2 0
..................................................AATGCCACGGATGACTCGACTATAGT............................................................................................ 26 2 1 2.00 2 2 0
...................................................TAGCCACGGATGACTCGACTATAGT............................................................................................ 25 2 1 2.00 2 2 0
....................................................TGCCACGGATGACTCGACTATAGTA........................................................................................... 25 2 1 2.00 2 2 0
...................................................TAGCCACGGATGACTCGACTATAG............................................................................................. 24 2 1 2.00 2 1 1
..................................................AAAGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 2.00 2 2 0
..................................................TATGCCACGGATGACTCGACTATAGTA........................................................................................... 27 3 1 2.00 2 2 0
..................................................TATGCCACGGATGACTCGACTATAGT............................................................................................ 26 2 1 2.00 2 2 0
..................................................AACGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 2.00 2 2 0
...................................................AGGCCACGGATGACTCGACTATAG............................................................................................. 24 0 1 2.00 2 2 0
.......................................................CACGGATGACTCGACTATAG............................................................................................. 20 0 1 2.00 2 2 0
..................................................TTTGCCACGGATGACTCGACTATA.............................................................................................. 24 3 2 1.50 3 3 0
....................................................AGCCACGGATGACTCGACTCTAG............................................................................................. 23 2 1 1.00 1 1 0
...................................................TTGCCACGGATGATTCGACTATAG............................................................................................. 24 3 1 1.00 1 1 0
...................................................AGCCCACGGATGACTCGACTATAG............................................................................................. 24 1 1 1.00 1 1 0
...................................................TTACCACGGATGACTCGACTATAG............................................................................................. 24 3 2 1.00 2 2 0
...................................................ATGCCACGGATGACTCGCCTATAG............................................................................................. 24 2 1 1.00 1 1 0
.....................................................GCCACGGATGACTCGACTATAG............................................................................................. 22 0 1 1.00 1 1 0
.........................................................................................TTTGACCGAGTCAAGTCGTCCTTG....................................................... 24 1 1 1.00 1 1 0
..................................................TAAGCCACGGATGACTCGACTATAGT............................................................................................ 26 2 1 1.00 1 1 0
...................................................TGGCCACGGATGAGTCGACTATAG............................................................................................. 24 2 1 1.00 1 1 0
....................................................TGCCACGGATGAATCGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
.....................................................GCCACGGATGACTCGACTATAGT............................................................................................ 23 0 1 1.00 1 1 0
....................................................TGCCACGGACGACTCGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
...................................................TGGCCACGGATGACTCGACTA................................................................................................ 21 1 1 1.00 1 0 1
....................................................AGCCACGGATGACTCGACTATAT............................................................................................. 23 2 1 1.00 1 1 0
....................................................TGACACGGATGACTCGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
..................................................CATGCCACGGATGACTCGACTATAG............................................................................................. 25 2 1 1.00 1 1 0
....................................................TGCCACGGATGACTAGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
...................................................TTGCCACAGATGACTCGACTATAG............................................................................................. 24 3 1 1.00 1 1 0
..................................................AAAGCCACGGATGACTCGACTAT............................................................................................... 23 2 1 1.00 1 1 0
..................................................AGAGCCACGGATGACTCGACTATAGT............................................................................................ 26 3 1 1.00 1 1 0
....................................................AGCCACGGATGCCTCGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
....................................................TGCCACGGATGACTCGACTCTAG............................................................................................. 23 2 1 1.00 1 1 0
....................................................AGCCACGGATGACTCGACTATA.............................................................................................. 22 1 1 1.00 1 1 0
....................................................TGCCCCGGATGACTCGACTATAG............................................................................................. 23 2 1 1.00 1 1 0
...................................................ATGCCACGGAAGACTCGACTATAG............................................................................................. 24 2 1 1.00 1 1 0
.................................................TAATGCCACGGATGACTCGACTATAG............................................................................................. 26 3 1 1.00 1 1 0
..........................................................................................ATGACCGAGTCAAGTCGTCCTTG....................................................... 23 1 2 0.50 1 1 0
...........................................................................................AGACCGAGTCAAGTCGTCCTTG....................................................... 22 1 2 0.50 1 0 1
...........................................................................................TGACCGACTCAAGTCGTCCTTG....................................................... 22 1 2 0.50 1 0 1
............................................................................................GACCGAGTCAAGTCGTCCTCG....................................................... 21 1 2 0.50 1 0 1
............................................................................................GACCGAGTCAAGTCGTCCTTG....................................................... 21 0 2 0.50 1 0 1
....................................................TGCCACGGATGCCTCGACTCTAG............................................................................................. 23 3 2 0.50 1 1 0
............................................................................................GACCGAGTCAAGTCGTCCTTGT...................................................... 22 0 2 0.50 1 1 0
....................................................TGCCACGGATGACTCGACTCCAG............................................................................................. 23 3 4 0.25 1 1 0
..................................................TTTGCCACGGATGACTCGACTA................................................................................................ 22 3 7 0.14 1 1 0

Generated: 04/30/2015 at 05:37 PM