ID:

rno-mir-212

 Coordinate:

chr10:62014702-62014812 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.9 -42.7

Sense Strand Reads

GGGCGGAGGGAGGGGACCTGAGAAGCAGCATCACTCTCAACTGCGGGCGACGGGATATCCCCGCCCGGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCCTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCCCGCCCCAGGACCGCCGACCCCCAGCCCCTCCGCGCCTCCCTGCGCCGCTGTCCG
******************************************************************((((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAAT.................................................................. 24 2 1 3.00 3 3 0
.................................................................................ACCTTGGCTCTAGACTGCTTACT........................................................................................................... 23 0 1 2.00 2 1 1
.................................................................................ACCTTGGCTCTAGACTGCTTACA........................................................................................................... 23 1 1 2.00 2 2 0
..........................................................................................................................AACAGTCTCCAGTCACGGCCATAT................................................................. 24 3 1 2.00 2 2 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAT................................................................... 23 1 1 2.00 2 2 0
.............................................................................................................................AGTCTCCAGTCACGGCC..................................................................... 17 0 1 2.00 2 0 2
.................................................................................ACCTTGGCTCTAGACTGCTTACTGT......................................................................................................... 25 1 1 2.00 2 2 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAA................................................................... 23 1 1 2.00 2 2 0
........................................................................................................................GTAACAGTCTCCAGTCACGGCCA.................................................................... 23 0 1 2.00 2 2 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCACT.................................................................. 24 1 1 2.00 2 2 0
.................................................................................ACCTTGGCTCTAGACTGCTTACTG.......................................................................................................... 24 0 1 2.00 2 2 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCA.................................................................... 22 0 1 2.00 2 2 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCATT.................................................................. 24 2 1 1.00 1 1 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAAAG................................................................. 25 2 1 1.00 1 1 0
.........................................................................................................................TAACAGTCTCCAGTCACGGC...................................................................... 20 0 1 1.00 1 0 1
........................................................................................................................ATAACAGTCTCCAGTCACGGCCAT................................................................... 24 2 1 1.00 1 0 1
..........................................................................................................................AACAGTCTCCAGTCACGGCCAT................................................................... 22 1 1 1.00 1 1 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAAAT................................................................. 25 3 1 1.00 1 1 0
.........................................................................................................................TAACAGTCTCCAGTCACGGCCAATA................................................................. 25 3 2 0.50 1 1 0
.............................................................................................................................AGTCTCCAGTCACGG....................................................................... 15 0 5 0.20 1 0 1

Anti-sense strand reads

CCCGCCTCCCTCCCCTGGACTCTTCGTCGTAGTGAGAGTTGACGCCCGCTGCCCTATAGGGGCGGGCCCGTCGCGCGGCCGTGGAACCGAGATCTGACGAATGACGGGCCCGGCGGGAGTCATTGTCAGAGGTCAGTGCCGGTGGCTGCGGACCGGGGCGGGGTCCTGGCGGCTGGGGGTCGGGGAGGCGCGGAGGGACGCGGCGACAGGC
******************************************************((((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).))))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:32 PM