ID:

rno-mir-20a

Coordinate:

chr15:100180334-100180418 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.1 -36.6 -36.6

Sense Strand Reads

TTGTGTATTTTTATTGTGTCGATGTAGACTCTTGGCGGTGTGTGATGTGACAGCTTCTGTAGCACTAAAGTGCTTATAGTGCAGGTAGTGTGTCGTCATCTACTGCATTACGAGCACTTACAGTACTGCCAGCTGTAAGCTCCAGCCTCGGCCCGTCGCCGTCCGACTGTCCGTACTGAGCACTG
**************************************************(((((...((((.(((.((((((((.((((((((.(((.(((....)))))))))))))).))))))))..))).)))).)))))....**********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528818
Adult_testes_Mili_IP
GSM1528817
Adult_testes
.................................................................TAAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 0 1 37635.00 37635 37477 114 44
.................................................................TAAAGTGCTTATAGTGCAGGTAA................................................................................................. 23 1 1 11024.00 11024 11002 18 4
.................................................................TAAAGTGCTTATAGTGCAGGTAT................................................................................................. 23 1 1 9601.00 9601 9584 3 14
.................................................................TAAAGTGCTTATAGTGCAGGTAGT................................................................................................ 24 0 1 6813.00 6813 6793 3 17
.................................................................TAAAGTGCTTATAGTGCAGGTAGA................................................................................................ 24 1 1 6617.00 6617 6608 3 6
.................................................................TAAAGTGCTTATAGTGCAGGTA.................................................................................................. 22 0 1 4568.00 4568 4560 6 2
.................................................................TAAAGTGCTTATAGTGCAGGTAAA................................................................................................ 24 2 1 1825.00 1825 1825 0 0
.................................................................TAAAGTGCTTATAGTGCAGGT................................................................................................... 21 0 1 1520.00 1520 1508 3 9
..................................................................AAAGTGCTTATAGTGCAGGTAG................................................................................................. 22 0 1 1283.00 1283 1249 26 8
.................................................................TAAAGTGCTTATAGTGCAGGTAGAA............................................................................................... 25 2 1 989.00 989 986 1 2
.................................................................TAAAGTGCTTATAGTGCAGGTAAT................................................................................................ 24 1 1 577.00 577 576 0 1
..................................................................AAAGTGCTTATAGTGCAGGTAGT................................................................................................ 23 0 1 462.00 462 459 0 3
................................................................ATAAAGTGCTTATAGTGCAGGTAG................................................................................................. 24 1 1 460.00 460 458 0 2
.................................................................TAAAGTGCTTATAGTGCAGGTAAAA............................................................................................... 25 3 1 423.00 423 423 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAA................................................................................................. 22 1 1 343.00 343 342 1 0
.................................................................TAACGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 320.00 320 317 3 0
.................................................................TAAAGTGCTTATAGTGCAGGTATT................................................................................................ 24 1 1 318.00 318 317 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTAGAT............................................................................................... 25 2 1 269.00 269 268 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTAGAAA.............................................................................................. 26 3 1 267.00 267 264 0 3
..................................................................AAAGTGCTTATAGTGCAGGTAT................................................................................................. 22 1 1 256.00 256 256 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGA................................................................................................ 23 1 1 253.00 253 252 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTCG................................................................................................. 23 1 1 251.00 251 250 1 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTT............................................................................................... 25 1 1 239.00 239 238 0 1
.....................................................................................................ACTGCATTACGAGCACTTACAGT............................................................. 23 0 1 230.00 230 213 0 17
.................................................................TAAAGTGCTTATAGTGCAGGTAGTA............................................................................................... 25 1 1 229.00 229 229 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTAA.............................................................................................. 26 2 1 220.00 220 220 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTT................................................................................................. 23 2 1 213.00 213 211 1 1
.................................................................TAAAGTGCTTATAGTGCAGGTT.................................................................................................. 22 1 1 208.00 208 207 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTATA................................................................................................ 24 2 1 187.00 187 187 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTAT.............................................................................................. 26 1 1 166.00 166 165 1 0
.................................................................TAAAGTGCTTATAGTGCAGGTTA................................................................................................. 23 2 1 161.00 161 161 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGAAT.............................................................................................. 26 2 1 156.00 156 155 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTAAG................................................................................................ 24 2 1 141.00 141 141 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTGG................................................................................................. 23 1 1 135.00 135 134 1 0
................................................................ATAAAGTGCTTATAGTGCAGGTAA................................................................................................. 24 2 1 120.00 120 120 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAT................................................................................................. 24 2 1 112.00 112 111 0 1
..................................................................AAAGTGCTTATAGTGCAGGTA.................................................................................................. 21 0 1 111.00 111 111 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAGT................................................................................................ 25 1 1 105.00 105 104 0 1
.................................................................TAACGTGCTTATAGTGCAGGTAT................................................................................................. 23 2 1 104.00 104 104 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 101.00 101 101 0 0
.....................................................................GTGCTTATAGTGCAGGTAG................................................................................................. 19 0 1 101.00 101 98 0 3
.................................................................TAAAGTGCTTATAGTGCAGGTAGTTT.............................................................................................. 26 1 1 93.00 93 90 0 3
.................................................................TAAAGTGCTTCTAGTGCAGGTAG................................................................................................. 23 1 1 93.00 93 89 4 0
...................................................................AAGTGCTTATAGTGCAGGTAG................................................................................................. 21 0 1 89.00 89 89 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTA.................................................................................................. 23 1 1 89.00 89 89 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTAA................................................................................................ 24 3 1 82.00 82 82 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTG................................................................................................. 23 1 1 82.00 82 81 1 0
.................................................................TAACGTGCTTATAGTGCAGGTAA................................................................................................. 23 2 1 81.00 81 81 0 0
.................................................................TACCGTGCTTATAGTGCAGGTAG................................................................................................. 23 2 1 74.00 74 73 1 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGG................................................................................................ 24 1 1 71.00 71 71 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTGA................................................................................................. 23 2 1 70.00 70 70 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGAG............................................................................................... 25 1 1 70.00 70 70 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAAA................................................................................................ 23 2 1 69.00 69 69 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTAG................................................................................................. 23 1 1 64.00 64 64 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAGA................................................................................................ 25 2 1 64.00 64 62 0 2
.................................................................TAAAGCGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 64.00 64 64 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAGT................................................................................................ 24 1 1 63.00 63 63 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAC................................................................................................. 23 1 1 61.00 61 61 0 0
...............................................................AATAAAGTGCTTATAGTGCAGGTAG................................................................................................. 25 1 1 61.00 61 61 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAGA................................................................................................ 24 2 1 58.00 58 58 0 0
.................................................................TAAAGTGCTTATAGTGCAGG.................................................................................................... 20 0 1 57.00 57 56 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTTAT................................................................................................ 24 2 1 53.00 53 52 1 0
..................................................................AAAGTGCTTATAGTGCAGGTAAT................................................................................................ 23 1 1 53.00 53 53 0 0
.................................................................TAAAGTGCTTATACTGCAGGTAG................................................................................................. 23 1 1 52.00 52 51 1 0
..................................................................AAAGTGCTTATAGTGCAGGT................................................................................................... 20 0 1 51.00 51 51 0 0
.................................................................TAAAGTGCTTATAATGCAGGTAG................................................................................................. 23 1 1 51.00 51 51 0 0
.................................................................TAAAGTGCTTAAAGTGCAGGTAG................................................................................................. 23 1 1 47.00 47 47 0 0
.................................................................TAAAGTGCTTATAGAGCAGGTAG................................................................................................. 23 1 1 46.00 46 46 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTCGA................................................................................................ 24 2 1 44.00 44 44 0 0
.....................................................................................................ACTGCATTACGAGCACTTACA............................................................... 21 0 1 43.00 43 40 0 3
.................................................................TAAAGTGCTTATAGTGCAGGTAAAG............................................................................................... 25 2 1 42.00 42 42 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTCA................................................................................................. 23 2 2 39.00 78 78 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATAT............................................................................................... 25 3 1 39.00 39 39 0 0
................................................................CTAAAGTGCTTATAGTGCAGGTAT................................................................................................. 24 1 1 39.00 39 39 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTCGT................................................................................................ 24 1 1 39.00 39 39 0 0
.....................................................................................................ACTGCATTACGAGCACTTACAG.............................................................. 22 0 1 38.00 38 35 0 3
.................................................................TAAAGTGCTTATAGTGCAGGTC.................................................................................................. 22 1 1 37.00 37 37 0 0
.................................................................TAACGTGCTTATAGTGCAGGTA.................................................................................................. 22 1 1 37.00 37 37 0 0
.................................................................TAAAGTGCTTATAGTGCAGGAAA................................................................................................. 23 2 1 37.00 37 37 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTAA................................................................................................. 23 2 1 36.00 36 36 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGC................................................................................................ 24 1 1 36.00 36 35 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTAAAT............................................................................................... 25 3 3 34.67 104 102 2 0
.................................................................TAAAGTGCTTATAGTGCAGGTAAC................................................................................................ 24 2 1 34.00 34 34 0 0
.................................................................TAAAGTGCTTGTAGTGCAGGTAG................................................................................................. 23 1 1 33.00 33 33 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATTT............................................................................................... 25 2 1 33.00 33 33 0 0
.................................................................TAAAGTGCTTATAGTGCAGGCAG................................................................................................. 23 1 1 33.00 33 33 0 0
...................................................................AAGTGCTTATAGTGCAGGTAGT................................................................................................ 22 0 1 33.00 33 33 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAAGA............................................................................................... 25 3 3 32.00 96 96 0 0
................................................................CTAAAGTGCTTATAGTGCAGGTAG................................................................................................. 24 0 1 32.00 32 32 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTCT................................................................................................. 23 2 2 32.00 64 64 0 0
.................................................................TAAAGTGCTTATAGTGCAAGTAG................................................................................................. 23 1 1 31.00 31 31 0 0
.................................................................TAAAGAGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 31.00 31 31 0 0
.................................................................TAAAGTGCTTTTAGTGCAGGTAG................................................................................................. 23 1 1 31.00 31 31 0 0
.................................................................TAAAGTGCTTATAGTGCAGGAA.................................................................................................. 22 1 1 31.00 31 31 0 0
.................................................................TAAAGTGCTTATAGTGCAGGAAG................................................................................................. 23 1 1 31.00 31 31 0 0
.................................................................TAAAGTGCTTCTAGTGCAGGTAA................................................................................................. 23 2 1 30.00 30 30 0 0
.................................................................TACAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 29.00 29 29 0 0
.................................................................TAAAGTGCTTATAGTGCAG..................................................................................................... 19 0 1 28.00 28 28 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTG.................................................................................................. 22 1 1 28.00 28 28 0 0
................................................................ATAAAGTGCTTATAGTGCAGGT................................................................................................... 22 1 1 27.00 27 27 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTAGT................................................................................................ 24 1 1 26.00 26 26 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTGGT................................................................................................ 24 1 1 26.00 26 26 0 0
.................................................................TAAAGTGCTTACAGTGCAGGTAG................................................................................................. 23 1 3 25.33 76 76 0 0
.................................................................TAGCGTGCTTATAGTGCAGGTAG................................................................................................. 23 2 1 25.00 25 25 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGTT............................................................................................... 24 1 1 25.00 25 25 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGAGA.............................................................................................. 26 2 1 25.00 25 25 0 0
...................................................................AAGTGCTTATAGTGCAGGTAA................................................................................................. 21 1 1 25.00 25 25 0 0
.................................................................TAAAGTGCTTATAGTGCAGGGAG................................................................................................. 23 1 1 24.00 24 24 0 0
.................................................................TAAAGTGCTTATAGTCCAGGTAG................................................................................................. 23 1 1 24.00 24 24 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTGTG............................................................................................. 27 0 1 23.00 23 23 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGGA............................................................................................... 25 2 1 23.00 23 23 0 0
.................................................................TAAAGTGCTTATAGTGAAGGTAG................................................................................................. 23 1 1 23.00 23 22 1 0
.................................................................TAAGGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 23.00 23 23 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTTA.............................................................................................. 26 2 1 23.00 23 23 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAAA................................................................................................ 25 3 1 23.00 23 22 0 1
.................................................................TAAAGTGATTATAGTGCAGGTAG................................................................................................. 23 1 1 22.00 22 22 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGATT.............................................................................................. 26 2 1 22.00 22 21 0 1
.................................................................TAAAGTGCTTATAGTGCAGGTAATA............................................................................................... 25 2 1 22.00 22 22 0 0
.................................................................TAAAGTGCTTATAGTGCAGGA................................................................................................... 21 1 1 22.00 22 22 0 0
.................................................................TATCGTGCTTATAGTGCAGGTAG................................................................................................. 23 2 1 22.00 22 22 0 0
......................................................................TGCTTATAGTGCAGGTAG................................................................................................. 18 0 1 22.00 22 21 0 1
.................................................................TAAAGTGCTTATATTGCAGGTAG................................................................................................. 23 1 1 22.00 22 22 0 0
...............................................................AATAAAGTGCTTATAGTGCAGGTAA................................................................................................. 25 2 1 21.00 21 21 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGAA............................................................................................... 24 2 2 21.00 42 42 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTGT.............................................................................................. 26 0 1 21.00 21 21 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTAT................................................................................................. 23 2 1 21.00 21 21 0 0
.................................................................CAAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 4 20.25 81 79 1 1
.................................................................TAAAGTGCTTCTAGTGCAGGTAGT................................................................................................ 24 1 1 20.00 20 20 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAAAAT.............................................................................................. 26 3 1 20.00 20 20 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGAAT.............................................................................................. 25 2 1 20.00 20 20 0 0
................................................................GTAAAGTGCTTATAGTGCAGGTA.................................................................................................. 23 1 1 20.00 20 20 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATAA............................................................................................... 25 3 7 19.14 134 134 0 0
...................................................................AAGTGCTTATAGTGCAGGTAGA................................................................................................ 22 1 1 19.00 19 19 0 0
....................................................................AGTGCTTATAGTGCAGGTAG................................................................................................. 20 0 1 19.00 19 18 0 1
.....................................................................GTGCTTATAGTGCAGGTAGA................................................................................................ 20 1 1 19.00 19 19 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTGA................................................................................................ 24 2 1 18.00 18 18 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTGGA................................................................................................ 24 2 1 18.00 18 18 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTAT................................................................................................. 23 2 1 18.00 18 18 0 0
.................................................................TCAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 18.00 18 18 0 0
.................................................................TAGAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 18.00 18 17 0 1
...............................................................AATAAAGTGCTTATAGTGCAGGTAGT................................................................................................ 26 1 1 17.00 17 17 0 0
..............................................................AAATAAAGTGCTTATAGTGCAGGTAG................................................................................................. 26 2 1 17.00 17 17 0 0
...................................................................AAGTGCTTATAGTGCAGGTAT................................................................................................. 21 1 1 17.00 17 17 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTAGA................................................................................................ 24 2 1 17.00 17 17 0 0
...................................................................AAGTGCTTATAGTGCAGGTAGTA............................................................................................... 23 1 1 17.00 17 17 0 0
.................................................................TAAAGTGCTTATAGAGCAGGTAT................................................................................................. 23 2 1 17.00 17 17 0 0
.................................................................TAAAGTGCTTATAGTGCATGTAG................................................................................................. 23 1 1 17.00 17 17 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAAA................................................................................................ 24 3 1 17.00 17 17 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGAT............................................................................................... 24 2 3 16.33 49 49 0 0
.................................................................TAAAGTGCTTATACTGCAGGTAA................................................................................................. 23 2 1 16.00 16 16 0 0
.................................................................TAAAGTGCTTATAGTGCGGGTAG................................................................................................. 23 1 1 16.00 16 16 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTTT................................................................................................ 24 2 1 16.00 16 16 0 0
.................................................................TAAAGTACTTATAGTGCAGGTAG................................................................................................. 23 1 1 16.00 16 16 0 0
.................................................................TAAAGTGCTTCTAGTGCAGGTAGA................................................................................................ 24 2 1 16.00 16 16 0 0
...............................................................AGTAAAGTGCTTATAGTGCAGGT................................................................................................... 23 1 1 16.00 16 16 0 0
.................................................................TAAAGTGCTTATAGGGCAGGTAG................................................................................................. 23 1 1 16.00 16 16 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGAGT.............................................................................................. 26 1 1 15.00 15 15 0 0
.................................................................TAACGTGCTTATAGTGCAGGT................................................................................................... 21 1 1 15.00 15 15 0 0
.................................................................TAAAGTGCTTAAAGTGCAGGTAA................................................................................................. 23 2 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAAAGA.............................................................................................. 26 3 1 14.00 14 14 0 0
..................................................................AAAGTGCTTATAGTGCAGGTATT................................................................................................ 23 1 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTATT............................................................................................. 27 2 1 14.00 14 5 9 0
..................................................................TAAGTGCTTATAGTGCAGGTAG................................................................................................. 22 1 1 14.00 14 14 0 0
.................................................................TAATGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 14.00 14 14 0 0
.....................................................................................................ACTGCATTACGAGCACTTACAGA............................................................. 23 1 1 14.00 14 14 0 0
................................................................CTAAAGTGCTTATAGTGCAGGTA.................................................................................................. 23 0 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTTAT............................................................................................. 27 3 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTAAT............................................................................................. 27 3 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTATAGTGAAGGTCG................................................................................................. 23 2 1 14.00 14 14 0 0
.................................................................TAAAGTGCTTCTAGTGCAGGTAT................................................................................................. 23 2 2 13.50 27 27 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTTTT............................................................................................. 27 2 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTG............................................................................................... 25 0 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTAAA............................................................................................. 27 3 1 13.00 13 13 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAGAA............................................................................................... 25 3 1 13.00 13 13 0 0
...............................................................AATAAAGTGCTTATAGTGCAGGTA.................................................................................................. 24 1 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTGCCGGTAG................................................................................................. 23 1 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATACTGCAGGTAGA................................................................................................ 24 2 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTGAAGGTAA................................................................................................. 23 2 1 13.00 13 13 0 0
.................................................................TAAAGAGCTTATAGTGCAGGTAA................................................................................................. 23 2 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTCTAGTGCAGGTA.................................................................................................. 22 1 1 13.00 13 13 0 0
.................................................................TAAAGTCCTTATAGTGCAGGTAG................................................................................................. 23 1 1 13.00 13 13 0 0
.................................................................TAACGTGCTTATAGTGAAGGTAG................................................................................................. 23 2 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTACAGGTAG................................................................................................. 23 1 1 13.00 13 13 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTGT................................................................................................. 23 2 4 12.25 49 49 0 0
.................................................................TAAAGGGCTTATAGTGCAGGTA.................................................................................................. 22 1 1 12.00 12 12 0 0
.....................................................................GTGCTTATAGTGCAGGTAGT................................................................................................ 20 0 1 12.00 12 10 0 2
.................................................................TAGCGTGCTTATAGTGCAGGTA.................................................................................................. 22 2 1 12.00 12 12 0 0
...............................................................AATAAAGTGCTTATAGTGCAGGTAT................................................................................................. 25 2 1 12.00 12 12 0 0
...................................................................AAGTGCTTATAGTGCAGGTA.................................................................................................. 20 0 1 12.00 12 12 0 0
.................................................................TAAAGTGCTTATAGTTCAGGTAG................................................................................................. 23 1 1 12.00 12 12 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTTGT................................................................................................ 24 1 1 12.00 12 12 0 0
.................................................................AAAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 12.00 12 12 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGTA............................................................................................... 24 1 1 12.00 12 12 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGAC............................................................................................... 25 2 1 12.00 12 12 0 0
................................................................TTAAAGTGCTTATAGTGCAGGTAG................................................................................................. 24 1 1 11.00 11 11 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAAT................................................................................................ 25 2 1 11.00 11 11 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATTTT.............................................................................................. 26 2 1 11.00 11 11 0 0
.................................................................TAAAGTGCCTATAGTGCAGGTAG................................................................................................. 23 1 1 11.00 11 11 0 0
.................................................................TGAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 11.00 11 11 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAAT................................................................................................ 24 2 1 11.00 11 11 0 0
..................................................................AAAGTGCTTATAGTGCAGGTATA................................................................................................ 23 2 1 11.00 11 11 0 0
.................................................................TAAAGTGTTTATAGTGCAGGTAG................................................................................................. 23 1 1 11.00 11 11 0 0
.................................................................TAAAGCGCTTATAGTGCAGGTAA................................................................................................. 23 2 1 11.00 11 11 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATTA............................................................................................... 25 2 2 11.00 22 22 0 0
.................................................................TAAAGTGCTTACAGTGCAGGTAGT................................................................................................ 24 1 2 11.00 22 22 0 0
.................................................................TAAAGTGCTTAAAGTGCAGGTAT................................................................................................. 23 2 1 11.00 11 11 0 0
.................................................................TAAAGTGCTTATAGTGCAGGAAT................................................................................................. 23 2 3 10.33 31 31 0 0
.................................................................TAAAGTGCTTGTAGTGCAGGTAGT................................................................................................ 24 1 1 10.00 10 10 0 0
.................................................................TACCGTGCTTATAGTGCAGGTAT................................................................................................. 23 3 2 10.00 20 20 0 0
.................................................................TAACGTGCATATAGTGCAGGTAG................................................................................................. 23 2 1 10.00 10 10 0 0
.................................................................TAAAGCGCTTATAGTGCAGGTAT................................................................................................. 23 2 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATAAT.............................................................................................. 26 3 1 10.00 10 10 0 0
........................................................................CTTATAGTGCAGGTAG................................................................................................. 16 0 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCAGGGAA................................................................................................. 23 2 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATAG............................................................................................... 25 2 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCACGTAG................................................................................................. 23 1 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATGGTGCAGGTAG................................................................................................. 23 1 1 10.00 10 10 0 0
.....................................................................GTGCTTATAGTGCAGGTAT................................................................................................. 19 1 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGTGTGT............................................................................................ 28 0 1 10.00 10 10 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAGTAT.............................................................................................. 25 1 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTAAAGTGCAGGTAGT................................................................................................ 24 1 1 10.00 10 10 0 0
.................................................................TACCGTGCTTATAGTGCAGGTAGC................................................................................................ 24 3 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGAGCAGGTAGT................................................................................................ 24 1 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAATGCAGGTAA................................................................................................. 23 2 1 10.00 10 10 0 0
.................................................................TACCGTGCTTATAGTGCAGGTAGT................................................................................................ 24 2 1 10.00 10 10 0 0
.................................................................TAAAGTGCTTATAGTGCAGCTAG................................................................................................. 23 1 1 10.00 10 10 0 0
................................................................CTAAAGTGCTTATAGTGCAGGTAA................................................................................................. 24 1 1 10.00 10 10 0 0
.................................................................CAAAGTGCTTATAGTGCAGGTAGT................................................................................................ 24 1 2 9.50 19 18 0 1
.................................................................TAAAGTGCTCATAGTGCAGGTAG................................................................................................. 23 1 2 9.50 19 19 0 0
.................................................................TAAAGAGCTTATAGTGCAGGTAT................................................................................................. 23 2 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAGTGCAGGCAA................................................................................................. 23 2 1 9.00 9 8 1 0
.................................................................TAAAGTGCTTATAGAGCAGGTAGA................................................................................................ 24 2 1 9.00 9 9 0 0
..................................................................AAAGTGCTTATCGTGCAGGTAG................................................................................................. 22 1 1 9.00 9 9 0 0
.................................................................TAAATTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTAGT................................................................................................ 24 1 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAATGCAGGTAT................................................................................................. 23 2 3 9.00 27 27 0 0
.................................................................TAAAGTGCTTATAGTGCTGGTAG................................................................................................. 23 1 1 9.00 9 9 0 0
.................................................................TAAAGAGCTTATAGTGCAGGTAGA................................................................................................ 24 2 1 9.00 9 9 0 0
................................................................ATAAAGTGCTTATAGTGCCGGTAG................................................................................................. 24 2 1 9.00 9 9 0 0
.................................................................TAAAGCGCTTATAGTGCAGGTAGT................................................................................................ 24 1 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTAGA................................................................................................ 24 2 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATACTGCAGGTA.................................................................................................. 22 1 1 9.00 9 9 0 0
.................................................................TAACGTGCTTATAGAGCAGGTAG................................................................................................. 23 2 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTAA................................................................................................. 23 2 2 9.00 18 18 0 0
.................................................................TAAAGCGCTTATAGTGCAGGTAGA................................................................................................ 24 2 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTATAGTGTAGGTAG................................................................................................. 23 1 1 9.00 9 9 0 0
.................................................................TAAAGTGCTTACAGTGCAGGTAA................................................................................................. 23 2 3 8.67 26 25 1 0
.................................................................TACCGTGCTTATAGTGCAGGTAA................................................................................................. 23 3 2 8.50 17 17 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAGGT............................................................................................... 25 2 2 8.50 17 17 0 0
.................................................................AAACGTGCTTATAGTGCAGGTAG................................................................................................. 23 2 1 8.00 8 8 0 0
.................................................................TAAAGTTCTTATAGTGCAGGTAG................................................................................................. 23 1 1 8.00 8 8 0 0
.............................................................AAAATAAAGTGCTTATAGTGCAGGTAG................................................................................................. 27 3 1 8.00 8 8 0 0
....................................................................AGTGCTTATAGTGCAGGTAGTAA.............................................................................................. 23 2 2 8.00 16 16 0 0
.................................................................TAGCGTGCTTATAGTGCAGGTAT................................................................................................. 23 3 1 8.00 8 8 0 0
................................................................ATAAAGTGCTTATCGTGCAGGTAG................................................................................................. 24 2 1 8.00 8 8 0 0
.................................................................TAAAGTGCTTAAAGTGCAGGTAGA................................................................................................ 24 2 1 8.00 8 8 0 0
.......................................................................GCTTATAGTGCAGGTAG................................................................................................. 17 0 1 8.00 8 6 0 2
.................................................................TAAAGTGCTTTTAGTGCAGGTAGA................................................................................................ 24 2 1 8.00 8 8 0 0
.................................................................TAACGTGCTTATAGTGCAGGTAGC................................................................................................ 24 2 1 8.00 8 8 0 0
.................................................................TAAAGTGCTTATAGTGCAGGCAGT................................................................................................ 24 1 1 8.00 8 8 0 0
.....................................................................................................ACTGCATTAAGAGCACTTACAGT............................................................. 23 1 1 8.00 8 8 0 0
.................................................................TAAAGTGCTTATAGTCCAGGTAT................................................................................................. 23 2 1 8.00 8 7 0 1
.................................................................TAAAGTGCTTATAGTGCAGGAT.................................................................................................. 22 2 2 7.50 15 15 0 0
.....................................................................GTGCTTATAGTGCAGGTAA................................................................................................. 19 1 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGTGCATGTAGA................................................................................................ 24 2 1 7.00 7 7 0 0
.................................................................TAAAGTGATTATAGTGCAGGTA.................................................................................................. 22 1 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGAGCAGGTAA................................................................................................. 23 2 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGCGCAGGT................................................................................................... 21 1 1 7.00 7 7 0 0
.................................................................TAAAGGGCTTATAGTGCAGGT................................................................................................... 21 1 1 7.00 7 7 0 0
.................................................................GAAAGTGCTTATAGTGCAGGTAT................................................................................................. 23 2 1 7.00 7 7 0 0
..................................................................AAAGTGCTTATAGTGCAGGTAC................................................................................................. 22 1 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATATTGCAGGTAA................................................................................................. 23 2 1 7.00 7 7 0 0
.................................................................TACCGTGCTTATAGTGCAGGTA.................................................................................................. 22 2 1 7.00 7 7 0 0
.....................................................................................................ACTGCATTACGAGCACTTACAGTA............................................................ 24 0 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTCTAGTGCAGGT................................................................................................... 21 1 1 7.00 7 7 0 0
.................................................................GAAAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAATGCAGGTA.................................................................................................. 22 1 1 7.00 7 7 0 0
...............................................................AATAAAGTGCTTATAGTGCAGGT................................................................................................... 23 1 1 7.00 7 7 0 0
.................................................................TATAGTGCTTATAGTGCAGGTAG................................................................................................. 23 1 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATTAT.............................................................................................. 26 2 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAACA............................................................................................... 25 3 1 7.00 7 7 0 0
.................................................................TACCGTGCTTATAGTGCAGGTAGA................................................................................................ 24 3 1 7.00 7 7 0 0
.................................................................GAAAGTGCTTATAGTGCAGGTAA................................................................................................. 23 2 1 7.00 7 7 0 0
.................................................................TAAAGTGCTTATAGCGCAGGTA.................................................................................................. 22 1 1 7.00 7 7 0 0
................................................................ATAAAGTGCTTATAGTGCAGGTAGAA............................................................................................... 26 3 1 7.00 7 7 0 0
.....................................................................................................ACTGCATTACGAGCACTTACAGTT............................................................ 24 1 1 7.00 7 6 0 1
.................................................................TAAAGTGCTTATACTGCAGGTAGT................................................................................................ 24 1 1 7.00 7 7 0 0
.................................................................CAAAGTGCTTATAGTGCAGGTAT................................................................................................. 23 2 4 6.75 27 27 0 0
.................................................................TAAAGTGCTTACAGTGCAGGTAT................................................................................................. 23 2 6 6.67 40 39 0 1
.................................................................CAAAGTGCTTATAGTGCAGGTAA................................................................................................. 23 2 4 6.50 26 26 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTAAGT............................................................................................... 25 3 2 6.50 13 13 0 0
......................................................................................................CTGCATTACGAGCACTTACAGT............................................................. 22 0 1 6.00 6 6 0 0
.................................................................TAAAGTGCTTTTAGTGCAGGTAGT................................................................................................ 24 1 1 6.00 6 6 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTCGAA............................................................................................... 25 3 1 6.00 6 6 0 0
..................................................................AAAGTGCTTATAGAGCAGGTAG................................................................................................. 22 1 1 6.00 6 6 0 0
.....................................................................................................ACTGCATTACGAGCACTTAC................................................................ 20 0 1 6.00 6 4 0 2
..................................................................AACGTGCTTATAGTGCAGGTAG................................................................................................. 22 1 1 6.00 6 6 0 0
.................................................................TAAAATGCTTATAGTGCAGGTAGA................................................................................................ 24 2 1 6.00 6 6 0 0
.................................................................TAAAGTGCTTATAGTGCAGGTATC................................................................................................ 24 2 1 6.00 6 6 0 0
..................................................................AAAGTGCTTATAGTGCCGGTAG................................................................................................. 22 1 1 6.00 6 6 0 0
.................................................................TAAAGTGCTTATAGTGCAGGGAGA................................................................................................ 24 2 1 6.00 6 6 0 0

Anti-sense strand reads

AACACATAAAAATAACACAGCTACATCTGAGAACCGCCACACACTACACTGTCGAAGACATCGTGATTTCACGAATATCACGTCCATCACACAGCAGTAGATGACGTAATGCTCGTGAATGTCATGACGGTCGACATTCGAGGTCGGAGCCGGGCAGCGGCAGGCTGACAGGCATGACTCGTGAC
**********************************************(((((...((((.(((.((((((((.((((((((.(((.(((....)))))))))))))).))))))))..))).)))).)))))....**************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM