ID:

rno-mir-201

Coordinate:

chrX:155339140-155339219 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-28.9 -28.6 -28.5

Sense Strand Reads

TGTTTTGCATTCATGTTAAGAAGATGAGTTGCTACCTTCAATGATGTTATGTACAGTACCTCACTCAGTAAGGCATTGTTCTTCTATACTAATAAATGAACAGCGCCTTTCTGTGTAGCGTAATGTGCAACCTGGACAGCATTTGTAGTAGCATTGATGGTAAGCTTTAGTCACAGATCA
**********************************************...((((((.(((((.((.(((.(((((.((((((...(((....)))...)))))).))))).))).)))).))).))))))....***********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
.............................................................CACTCAGTAAGGCATTGTTCTT................................................................................................. 22 0 1 8644.00 8644 7274 1360 10
.............................................................CACTCAGTAAGGCATTGTTCTTT................................................................................................ 23 1 1 2238.00 2238 2161 75 2
.............................................................CACTCAGTAAGGCATTGTTCT.................................................................................................. 21 0 1 2085.00 2085 1334 749 2
.............................................................CACTCAGTAAGGCATTGTTCTTA................................................................................................ 23 1 1 1076.00 1076 1055 21 0
.............................................................CACTCAGTAAGGCATTGTTCTTC................................................................................................ 23 0 1 670.00 670 652 18 0
.............................................................CACTCAGTAAGGCATTGTTC................................................................................................... 20 0 1 571.00 571 276 295 0
................................................................................................TGAACAGCGCCTTTCTGTGTAG.............................................................. 22 0 1 498.00 498 395 103 0
.............................................................CACTCAGTAAGGCATTGTTCTTAA............................................................................................... 24 2 1 419.00 419 416 2 1
.............................................................CACTCAGTAAGGCATTGTTCTTAT............................................................................................... 24 1 1 282.00 282 282 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTT............................................................................................... 24 1 1 280.00 280 275 4 1
..............................................................ACTCAGTAAGGCATTGTTCTT................................................................................................. 21 0 1 270.00 270 258 12 0
.............................................................CACTCAGTAAGGCATTGTT.................................................................................................... 19 0 1 237.00 237 61 176 0
.............................................................CACTCAGTAAGGCATTGTTCTTCT............................................................................................... 24 0 1 187.00 187 185 2 0
.............................................................CACTCAGTAAGGCATTGTTCTTTA............................................................................................... 24 2 1 113.00 113 113 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGC............................................................. 23 0 1 110.00 110 91 18 1
.............................................................CACTCAGTAAGGCCTTGTTCTT................................................................................................. 22 1 1 109.00 109 108 1 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAA.............................................................................................. 25 2 1 97.00 97 97 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCA............................................................................................... 24 1 1 97.00 97 97 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTT................................................................................................ 22 1 1 76.00 76 74 1 1
............................................................ACACTCAGTAAGGCATTGTTCTT................................................................................................. 23 1 1 72.00 72 60 12 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGT............................................................. 23 1 1 71.00 71 69 2 0
.............................................................CACTCAGTAAGGCATTGTTCTTG................................................................................................ 23 1 1 69.00 69 67 2 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGA............................................................. 23 1 1 66.00 66 61 5 0
.............................................................CACTCAGTAAGGCATTGT..................................................................................................... 18 0 1 61.00 61 7 43 11
..............................................................ACTCAGTAAGGCATTGTTCT.................................................................................................. 20 0 1 54.00 54 47 7 0
.............................................................CACTCAGTCAGGCATTGTTCTT................................................................................................. 22 1 1 49.00 49 48 1 0
.............................................................CACTCAGTAAGGCATTGTTCTA................................................................................................. 22 1 1 48.00 48 45 2 1
.................................................................................................GAACAGCGCCTTTCTGTGTAG.............................................................. 21 0 1 45.00 45 32 13 0
.............................................................CACTCAGTAAGGCATTGTTCTTGT............................................................................................... 24 1 1 40.00 40 39 1 0
................................................................................................TGAACAGCGCCTTTCTGTGTAT.............................................................. 22 1 1 38.00 38 35 3 0
.............................................................CACTCAGTAAGGCCTTGTTCTTT................................................................................................ 23 2 1 32.00 32 32 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTAA.............................................................................................. 25 2 1 31.00 31 31 0 0
.............................................................CACTCAGTAAGGCATTGTTCTAA................................................................................................ 23 2 1 29.00 29 28 1 0
..............................................................ACTCAGTAAGGCATTGTTCTTC................................................................................................ 22 0 1 29.00 29 28 1 0
.................................................................................................GAACAGCGCCTTTCTGTGTAGC............................................................. 22 0 1 27.00 27 16 11 0
................................................................................................TGAACAGCGCCTTTCTGTGT................................................................ 20 0 1 24.00 24 9 15 0
.............................................................CACTCAGTAAGGCATTGTTCTTAG............................................................................................... 24 2 1 24.00 24 24 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAGA.............................................................................................. 25 2 1 23.00 23 22 0 1
.............................................................CACTCAGTAAGGCATTGTTCTAT................................................................................................ 23 2 1 23.00 23 23 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTGA............................................................................................... 24 2 1 23.00 23 23 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTA................................................................................................ 22 1 1 20.00 20 20 0 0
............................................................ACACTCAGTAAGGCATTGTTCTTT................................................................................................ 24 2 1 20.00 20 19 1 0
.............................................................CACTCAGTAAGGCATTGTTA................................................................................................... 20 1 1 20.00 20 10 10 0
.............................................................CACTCAGTAAGGCCTTGTTCT.................................................................................................. 21 1 1 19.00 19 19 0 0
.................................................................CAGTAAGGCATTGTTCTT................................................................................................. 18 0 1 17.00 17 1 16 0
..............................................................ACTCAGTAAGGCATTGTTCTTAT............................................................................................... 23 1 1 17.00 17 17 0 0
............................................................TCACTCAGTAAGGCATTGTTCT.................................................................................................. 22 0 1 17.00 17 17 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCAA.............................................................................................. 25 1 1 16.00 16 16 0 0
.............................................................CAGTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 16.00 16 9 7 0
............................................................ACACTCAGTAAGGCATTGTTCT.................................................................................................. 22 1 1 16.00 16 5 11 0
...............................................................................................ATGAACAGCGCCTTTCTGTGTAG.............................................................. 23 0 1 16.00 16 11 5 0
.............................................................CACTCAGTAAGGCTTTGTTCTT................................................................................................. 22 1 1 14.00 14 14 0 0
...............................................................CTCAGTAAGGCATTGTTCTT................................................................................................. 20 0 1 14.00 14 10 4 0
..............................................................ACTCAGTAAGGCATTGTTCTTAA............................................................................................... 23 2 1 14.00 14 14 0 0
.............................................................CACTCAGTAAGGCCTTGTTCTTC................................................................................................ 23 1 1 13.00 13 13 0 0
.............................................................CAATCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 13.00 13 9 4 0
.............................................................CACTCAGTAACGCATTGTTCTT................................................................................................. 22 1 1 13.00 13 12 1 0
.............................................................CACTCAGTAAGGCCTTGTTCTTA................................................................................................ 23 2 1 12.00 12 12 0 0
.............................................................CACTCAGTAAGACATTGTTCTT................................................................................................. 22 1 1 12.00 12 12 0 0
.............................................................CACTCAGTCAGGCATTGTTCT.................................................................................................. 21 1 1 12.00 12 11 1 0
.............................................................CCCTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 12.00 12 7 5 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTA.............................................................................................. 25 1 1 12.00 12 12 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAT.............................................................................................. 25 3 2 12.00 24 24 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTT.............................................................................................. 25 2 2 11.50 23 23 0 0
.............................................................CACTCAGTAAGGCATTGTTCTC................................................................................................. 22 1 1 11.00 11 10 1 0
.............................................................CACTCAGCAAGGCATTGTTCTT................................................................................................. 22 1 1 11.00 11 11 0 0
..............................................................ACTCAGTAAGGCATTGTTC................................................................................................... 19 0 1 11.00 11 7 4 0
.............................................................CACTCAGTAAGGCATTGTTCA.................................................................................................. 21 1 1 11.00 11 8 3 0
................................................................................................TGAACAGCGCCTTTCTGTGTA............................................................... 21 0 1 11.00 11 11 0 0
.............................................................CACTCAGTAAGGCATTATTCTT................................................................................................. 22 1 1 11.00 11 10 1 0
..............................................................ACTCAGTAAGGCATTGTTCTTTT............................................................................................... 23 1 1 11.00 11 11 0 0
.............................................................CACTCAGTAAGGCAATGTTCTT................................................................................................. 22 1 1 11.00 11 4 7 0
................................................................................................TGAACAGCGCCTTTCTGTGTAA.............................................................. 22 1 1 11.00 11 10 1 0
............................................................ACACTCAGTAAGGCATTGTTCTTC................................................................................................ 24 1 1 10.00 10 10 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGCA............................................................ 24 1 1 10.00 10 10 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTG................................................................................................ 22 1 1 10.00 10 10 0 0
.............................................................CACTCAGTAAGGCATTG...................................................................................................... 17 0 1 9.00 9 1 8 0
.............................................................CATTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 9.00 9 2 7 0
.................................................................CAGTAAGGCATTGTTCT.................................................................................................. 17 0 1 9.00 9 0 9 0
.............................................................CACTCAGTAAGGCATTGTTCTTCG............................................................................................... 24 1 1 9.00 9 9 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTATCG............................................................ 24 1 1 9.00 9 0 0 9
.............................................................CACTCAGTAAGGCATTGTTCTTTAAA............................................................................................. 26 3 2 9.00 18 18 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTAT.............................................................................................. 25 3 3 8.33 25 25 0 0
...........................................................AACACTCAGTAAGGCATTGTTCTT................................................................................................. 24 2 1 8.00 8 8 0 0
.............................................................CACTCAGTAAGGCGTTGTTCTT................................................................................................. 22 1 1 8.00 8 8 0 0
.............................................................CACTCAGTAAGGCATTGCTCTT................................................................................................. 22 1 1 8.00 8 6 2 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTAT............................................................................................. 26 0 1 8.00 8 8 0 0
.....................................................................................................AGCGCCTTTCTGTGTAG.............................................................. 17 0 1 8.00 8 0 8 0
.............................................................CAGTCAGTAAGGCCTTGTTCTT................................................................................................. 22 2 1 8.00 8 8 0 0
.............................................................CACTCAGTAAGGCATTGTACTT................................................................................................. 22 1 1 8.00 8 8 0 0
............................................................TCACTCAGTAAGGCATTGTTCTT................................................................................................. 23 0 1 8.00 8 8 0 0
.............................................................CACTCAGTAAGGCTTTGTTCTTA................................................................................................ 23 2 1 8.00 8 8 0 0
...............................................................CTCAGTAAGGCATTGTTCTTT................................................................................................ 21 1 1 7.00 7 7 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAGT.............................................................................................. 25 3 1 7.00 7 7 0 0
.............................................................CACTCAGGAAGGCATTGTTCTT................................................................................................. 22 1 1 7.00 7 6 1 0
.............................................................CACTCAGTAAAGCATTGTTCTT................................................................................................. 22 1 1 7.00 7 4 3 0
..............................................................ACTCAGTAAGGCATTGTT.................................................................................................... 18 0 1 7.00 7 3 4 0
.............................................................CACTCAGTAAGCCATTGTTCTT................................................................................................. 22 1 1 7.00 7 7 0 0
.............................................................CACTCAGTAAGGCATTGTTCCT................................................................................................. 22 1 1 7.00 7 5 2 0
.............................................................CAGTCAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 6.00 6 1 5 0
.............................................................CACTCAGAAAGGCATTGTTCTT................................................................................................. 22 1 1 6.00 6 6 0 0
..................................................................................................AACAGCGCCTTTCTGTGTAG.............................................................. 20 0 1 6.00 6 6 0 0
...............................................................CTCAGTAAGGCATTGTTCTTA................................................................................................ 21 1 1 6.00 6 6 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTTT............................................................................................. 26 1 1 6.00 6 6 0 0
.............................................................CACTCAGAAAGGCATTGTTCT.................................................................................................. 21 1 1 6.00 6 6 0 0
................................................................................................TGAACAGCGCCTTTCTGTG................................................................. 19 0 1 6.00 6 2 4 0
..............................................................ACTCAGTAAGGCATTGTTCTTCA............................................................................................... 23 1 1 6.00 6 6 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTCT............................................................................................... 23 0 1 6.00 6 6 0 0
.............................................................CACTCAGTAAGGCATTGTTCCTT................................................................................................ 23 2 1 6.00 6 6 0 0
.............................................................CACTCAGTAAGGCATTCTTCTT................................................................................................. 22 1 1 6.00 6 5 1 0
.............................................................CACTCAGTAAGGCATTGTTCTTCAT.............................................................................................. 25 2 1 6.00 6 6 0 0
.............................................................CACTCAGTCAGGCATTGTTCTTT................................................................................................ 23 2 3 5.33 16 16 0 0
.............................................................CTCTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 5.00 5 0 5 0
..................................................................AGTAAGGCATTGTTCTT................................................................................................. 17 0 1 5.00 5 0 5 0
.............................................................CACTCAGTAAGGCCTTGTTCTTAT............................................................................................... 24 2 1 5.00 5 5 0 0
.................................................................................................GAACAGCGCCTTTCTGTGTAT.............................................................. 21 1 1 5.00 5 4 1 0
.................................................................................................GAACAGCGCCTTTCTGTGT................................................................ 19 0 1 5.00 5 1 4 0
.............................................................CAATCAGTAAGGCCTTGTTCTT................................................................................................. 22 2 3 5.00 15 15 0 0
.............................................................AACTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 5.00 5 5 0 0
............................................................ACACTCAGTAAGGCATTGTTCTTA................................................................................................ 24 2 1 5.00 5 5 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAG.............................................................................................. 25 3 2 4.50 9 9 0 0
.............................................................CACTCAGTAAGGCATTGTTAA.................................................................................................. 21 2 3 4.33 13 9 4 0
.............................................................CACTCAGTAAGGCACTGTTCTT................................................................................................. 22 1 1 4.00 4 0 4 0
............................................................ACACGCAGTAAGGCATTGTTCTT................................................................................................. 23 2 1 4.00 4 4 0 0
.............................................................CACTCAGAAAGGCATTGTTCTTT................................................................................................ 23 2 1 4.00 4 4 0 0
................................................................................................TGACCAGCGCCTTTCTGTGTAG.............................................................. 22 1 1 4.00 4 4 0 0
....................................................................................................CAGCGCCTTTCTGTGTAG.............................................................. 18 0 1 4.00 4 0 4 0
.............................................................CACTCAGTAATGCATTGTTCTT................................................................................................. 22 1 1 4.00 4 1 3 0
.............................................................CACTCAGTAAGGCGTTGTTCTTT................................................................................................ 23 2 1 4.00 4 4 0 0
...............................................................CTCAGTAAGGCATTGTTCT.................................................................................................. 19 0 1 4.00 4 1 3 0
.................................................................................................GAACAGCGCCTTTCTGTGTAA.............................................................. 21 1 1 4.00 4 2 2 0
............................................................ACACTCAGTAAGGCATTGTTC................................................................................................... 21 1 1 4.00 4 2 2 0
.............................................................CACTCAGTAAGGCATTGTCCTT................................................................................................. 22 1 1 4.00 4 3 1 0
.................................................................................................GAACAGCGCCTTTCTGTGTAGCT............................................................ 23 1 1 4.00 4 4 0 0
...............................................................................................ATGAACAGCGCCTTTCTGTGTAGT............................................................. 24 1 1 4.00 4 4 0 0
..........................................................AATCACTCAGTAAGGCATTGTTCT.................................................................................................. 24 2 1 4.00 4 4 0 0
.............................................................CACTCAGTCAGGCATTGTTCTA................................................................................................. 22 2 1 4.00 4 4 0 0
.............................................................CACTCAGTCAGGCATTGTTCTTA................................................................................................ 23 2 1 4.00 4 4 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTAAA.............................................................................................. 24 2 1 4.00 4 4 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGAA............................................................ 24 2 1 4.00 4 4 0 0
.............................................................CACTCAGTAAGTCATTGTTCTT................................................................................................. 22 1 1 4.00 4 3 1 0
...........................................................TTCACTCAGTAAGGCATTGTTC................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................CACTCAGTGAGGCATTGTTCTT................................................................................................. 22 1 1 4.00 4 4 0 0
.............................................................CACTCCGTAAGGCATTGTTCTTT................................................................................................ 23 2 1 4.00 4 3 1 0
.............................................................CATTCAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 4.00 4 1 3 0
.............................................................CACTCCGTAAGGCATTGTTCTT................................................................................................. 22 1 1 4.00 4 3 1 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTATA............................................................................................ 27 0 1 4.00 4 4 0 0
...............................................................................................ATGAACAGCGCCTTTCTGTGTAA.............................................................. 23 1 1 4.00 4 4 0 0
.................................................................................................GAACAGCGCCTTTCTGTGTAGT............................................................. 22 1 1 4.00 4 3 1 0
.............................................................CCCTCAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 4.00 4 0 4 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAC.............................................................................................. 25 3 1 4.00 4 4 0 0
..............................................................ACTCAGTAAGGCATTGTTCTC................................................................................................. 21 1 2 3.50 7 7 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTTT............................................................................................. 26 2 2 3.50 7 7 0 0
..............................................................ACTCAGTAAGGCAATGTTCTT................................................................................................. 21 1 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTA.............................................................................................. 25 0 1 3.00 3 3 0 0
...............................................................................................ATGAACAGCGCCTTTCTGTGTAT.............................................................. 23 1 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTT................................................................................................... 20 1 4 3.00 12 4 8 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAAAA............................................................................................ 27 3 1 3.00 3 3 0 0
.............................................................CACTCAATAAGGCATTGTTCTT................................................................................................. 22 1 2 3.00 6 6 0 0
.............................................................CACTCAGTAAGGCATTGTTCTCT................................................................................................ 23 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTCGT............................................................................................. 26 3 1 3.00 3 3 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGCT............................................................ 24 1 1 3.00 3 3 0 0
............................................................ACACTCAGTAAGGCATTGTTCTTAT............................................................................................... 25 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTT.............................................................................................. 25 1 1 3.00 3 3 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTATT............................................................. 23 2 1 3.00 3 3 0 0
.................................................................................................GAACAGCGCCTTTCTGTGTAGA............................................................. 22 1 1 3.00 3 2 1 0
.............................................................CACTCAGTAAGGCATTGTTCTGT................................................................................................ 23 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTTTTCTT................................................................................................. 22 1 1 3.00 3 2 1 0
.............................................................CACCCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTATT.............................................................................................. 25 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGCCATTGTTCTTA................................................................................................ 23 2 1 3.00 3 3 0 0
...............................................................................................ATGAACAGCGCCTTTCTGTGTAGC............................................................. 24 0 1 3.00 3 1 2 0
.............................................................CACTCAGCAAGGCATTGTTCT.................................................................................................. 21 1 1 3.00 3 3 0 0
.............................................................TACTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 3 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTCTT.............................................................................................. 24 1 1 3.00 3 3 0 0
............................................................ACACTCAGGAAGGCATTGTTCTT................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................CACACAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 3 0 0
.............................................................CGCTCAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 2 1 0
.............................................................CACTCAGTAAGGCATCGTTCTT................................................................................................. 22 1 1 3.00 3 2 1 0
.............................................................CACTCAGTACGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 2 1 0
.........................................................AAAACACTCAGTAAGGCATTGTTCTT................................................................................................. 26 3 1 3.00 3 3 0 0
.............................................................CACTCATTAAGGCATTGTTCTT................................................................................................. 22 1 1 3.00 3 2 1 0
.............................................................CACTCAGGAAGGCATTGTTCTTT................................................................................................ 23 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTAAA............................................................................................... 24 3 3 3.00 9 9 0 0
.............................................................CACTCAGTAACGCATTGTTCT.................................................................................................. 21 1 1 3.00 3 1 2 0
.............................................................CACTCAGTAAGGCATTGTTCAT................................................................................................. 22 1 1 3.00 3 3 0 0
.............................................................CACTAAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAAA............................................................................................. 26 3 2 3.00 6 6 0 0
.............................................................CAATCAGTAAGGCATTGTTCT.................................................................................................. 21 1 2 3.00 6 1 5 0
.............................................................CACTCCGTAAGGCATTGTTC................................................................................................... 20 1 1 3.00 3 1 2 0
.............................................................CACTCAGTAAGGCAGTGTTCTT................................................................................................. 22 1 1 3.00 3 0 3 0
.............................................................CTCTCAGTAAGGCATTGTTC................................................................................................... 20 1 1 3.00 3 0 3 0
.............................................................CACTCAGTAAGGCATTGTTCTTTG............................................................................................... 24 2 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTAG.............................................................................................. 25 3 1 3.00 3 3 0 0
.............................................................CACTCAGTAAGGCATTGTCCT.................................................................................................. 21 1 1 3.00 3 0 3 0
.............................................................CACTCAGTAAGGCATTGTACT.................................................................................................. 21 1 1 3.00 3 3 0 0
.............................................................CACTCATTAAGGCATTGTTCTTT................................................................................................ 23 2 2 2.50 5 5 0 0
.............................................................AACTCAGTAAGGCATTGTTCTTT................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTATACTA......................................................................................... 30 0 1 2.00 2 2 0 0
.............................................................CACTCAGTCAGGCATTGTTCTTCT............................................................................................... 24 1 1 2.00 2 2 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTATA............................................................. 23 2 1 2.00 2 2 0 0
.............................................................CATTCAGTAAGGCATTGTTCTTA................................................................................................ 23 2 1 2.00 2 2 0 0
................................................................................................TGAACAGCGCCTTCCTGTGTAG.............................................................. 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTAAAGA............................................................................................ 27 3 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCTTTGTTCT.................................................................................................. 21 1 1 2.00 2 2 0 0
.............................................................CACTCAGCAAGGCATTGTTCTTA................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTAGT............................................................................................... 24 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTCTTCTTT................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCACTAAGGCATTGTTCTT................................................................................................. 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCCTTGTTCTTTT............................................................................................... 24 2 1 2.00 2 2 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTTT.............................................................. 22 2 1 2.00 2 1 1 0
.............................................................CGCTCAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 2.00 2 0 2 0
................................................................TCAGTAAGGCATTGTTCTT................................................................................................. 19 0 1 2.00 2 0 2 0
.............................................................CACTCAGTAAGGAATTGTTCTT................................................................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................AACAGCGCCTTTCTGTGTAGC............................................................. 21 0 1 2.00 2 0 2 0
................................................................................................TGAACAGCGCCTTTCTGTGTCG.............................................................. 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCC.................................................................................................. 21 1 1 2.00 2 0 2 0
.............................................................AACTCAGTCAGGCATTGTTCTT................................................................................................. 22 2 4 2.00 8 8 0 0
.............................................................TACTCAGTAAGGCATTGTTCTTG................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCATTAAGGCATTGTTCT.................................................................................................. 21 1 1 2.00 2 1 1 0
.............................................................CACACAGTAAGGCATTGTTCTTT................................................................................................ 23 2 1 2.00 2 2 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTTA............................................................................................... 23 2 1 2.00 2 2 0 0
............................................................ACACTCAGTAAGGCATTGTT.................................................................................................... 20 1 1 2.00 2 0 2 0
............................................................ACACTCAGTAAGGCATTGTTCTTTA............................................................................................... 25 3 2 2.00 4 4 0 0
.............................................................CACTCAGTAAGGCAT........................................................................................................ 15 0 3 2.00 6 0 6 0
.............................................................CACTCAGTAAGGCTTTGTTCTTC................................................................................................ 23 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCCTTGTTC................................................................................................... 20 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTAT............................................................................................. 26 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCCTAT............................................................................................... 24 2 1 2.00 2 2 0 0
..............................................................ACTCAGTAAGGCATTGTTCTTTGA.............................................................................................. 24 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTGA.............................................................................................. 25 2 1 2.00 2 2 0 0
................................................................................................TGACCAGCGCCTTTCTGTGTAGC............................................................. 23 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTATTCTTA................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CGCTCAGTAAGGCATTGTT.................................................................................................... 19 1 1 2.00 2 0 2 0
.............................................................CACTCAGTAAGGCATTGTTCGT................................................................................................. 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCAATGTTCT.................................................................................................. 21 1 1 2.00 2 0 2 0
............................................................TCACTCAGTAAGGCATTGTTC................................................................................................... 21 0 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGCCATTGTTCT.................................................................................................. 21 1 1 2.00 2 1 1 0
...............................................................................................ATGAACAGCGCCTTTCTGTGT................................................................ 21 0 1 2.00 2 0 2 0
...............................................................CTCAGTAAGGCATTGTTCTTAA............................................................................................... 22 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAGGGCATTGTTCTT................................................................................................. 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCTTTGTTCTTT................................................................................................ 23 2 2 2.00 4 4 0 0
..........................................................AGTCACTCAGTAAGGCATTGTTCTT................................................................................................. 25 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAATGCATTGTTCT.................................................................................................. 21 1 1 2.00 2 0 2 0
.............................................................CACTCAGTCAGGCATTGTTCTTTT............................................................................................... 24 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGACATTGTTCTTC................................................................................................ 23 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTCTTCT.................................................................................................. 21 1 1 2.00 2 2 0 0
................................................................................................TGAACAGCACCTTTCTGTGTAG.............................................................. 22 1 1 2.00 2 2 0 0
............................................................CCACTCAGTAAGGCATTGTTCTT................................................................................................. 23 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTCGTA............................................................................................ 27 3 1 2.00 2 2 0 0
..........................................................CTTCACTCAGTAAGGCATTGTT.................................................................................................... 22 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTAA............................................................................................. 26 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCACTGTTCTTT................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGACATTGTTCTTA................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTAGT............................................................................................. 26 3 1 2.00 2 2 0 0
............................................................ACACTCAGTAAGGCATTGTTCTTCT............................................................................................... 25 1 1 2.00 2 1 0 1
................................................................................................TAAACAGCGCCTTTCTGTGTAG.............................................................. 22 1 1 2.00 2 1 1 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTAA............................................................................................. 26 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAAGCATTGTTCTTT................................................................................................ 23 2 3 2.00 6 6 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCGA.............................................................................................. 25 1 1 2.00 2 2 0 0
................................................................................................TGAACAGCGCCTTTTTGTGTAG.............................................................. 22 1 1 2.00 2 1 1 0
.............................................................CACTCAGTAAGGCATTGTTCTTGAGTA............................................................................................ 27 3 1 2.00 2 2 0 0
...................................................................................................ACAGCGCCTTTCTGTGTAG.............................................................. 19 0 1 2.00 2 0 2 0
..............................................................................................AATGAACAGCGCCTTTCTGTGTAGT............................................................. 25 1 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGCTCT.................................................................................................. 21 1 1 2.00 2 0 2 0
............................................................TCACTCAGTAAGGCATTGTTCTTC................................................................................................ 24 0 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTATT............................................................................................... 24 2 1 2.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTAGA............................................................................................... 24 3 4 1.75 7 7 0 0
.............................................................CAATCAGTAAGGCATTGTTCTTT................................................................................................ 23 2 3 1.67 5 5 0 0
.............................................................CACCCAGTCAGGCATTGTTCTT................................................................................................. 22 2 2 1.50 3 3 0 0
..................................................................AGTAAGGCATTGTTCT.................................................................................................. 16 0 2 1.50 3 0 3 0
.............................................................CACTCAGTAAGGCATTGTTCTGA................................................................................................ 23 2 2 1.50 3 3 0 0
.............................................................CACTCAGTCAGGCATTGTTCTC................................................................................................. 22 2 5 1.40 7 7 0 0
.............................................................CACTCAGTAAGGCATTGTTCTCA................................................................................................ 23 2 3 1.33 4 4 0 0
.............................................................CACTCAGTAAGGCATTGCTCTTA................................................................................................ 23 2 1 1.00 1 1 0 0
.............................................................CACTTAGTAAGGCATTGTTCTT................................................................................................. 22 1 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTCTATACT.......................................................................................... 29 0 1 1.00 1 1 0 0
................................................................................................TGAACAGCGCCTTTCTGTGGAG.............................................................. 22 1 1 1.00 1 1 0 0
.............................................................CACTCAGCAAGGCATTGTTCTTCT............................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCATTGTTCTG................................................................................................. 22 1 1 1.00 1 1 0 0
................................................................................................AGAACAGCGCCTTTCTGTGTAGT............................................................. 23 2 1 1.00 1 0 1 0
.............................................................CACTCAGTAAGGCGTTGTTCT.................................................................................................. 21 1 1 1.00 1 1 0 0
.............................................................CACTCAGAAAGGCATTGTTCTTCA............................................................................................... 24 2 1 1.00 1 1 0 0
................................................................................................TAAACAGCGCCTTTCTGTGTAGC............................................................. 23 1 1 1.00 1 1 0 0
................................................................................................TGAACAGCGCCTTTCTG................................................................... 17 0 1 1.00 1 0 1 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGTC............................................................ 24 2 1 1.00 1 0 1 0
.............................................................CACTCAGTCAGGCATTGTTCTTC................................................................................................ 23 1 1 1.00 1 1 0 0
..............................................................ACTCAGTACGGCATTGTTCT.................................................................................................. 20 1 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCATAGTTCTTA................................................................................................ 23 2 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTTTC.............................................................................................. 25 2 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCCTTGTTCTTGA............................................................................................... 24 3 2 1.00 2 2 0 0
.............................................................CACTCGGTAAGGCATTGTTC................................................................................................... 20 1 1 1.00 1 1 0 0
................................................................................................TGAACAGCGCCTTTCTGTGTAGAAA........................................................... 25 3 2 1.00 2 2 0 0
.............................................................CACTCAGTAAGGCATTGTTCTTGC............................................................................................... 24 2 1 1.00 1 1 0 0
................................................................TCAGTAAGGCATTGTTCTTCCAC............................................................................................. 23 2 1 1.00 1 1 0 0
..............................................................ACTCAGTAAGGCATAGTTCT.................................................................................................. 20 1 1 1.00 1 1 0 0
.............................................................CACTCAGTCAGGCATTGTTCTGC................................................................................................ 23 2 1 1.00 1 1 0 0
.............................................................CAATCAGTAAGGCATTGTTCTTCT............................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................CACTCAGTCAGGTATTGTTCTT................................................................................................. 22 2 1 1.00 1 1 0 0
.............................................................TACTCAGTAAGGCATTGTTCT.................................................................................................. 21 1 1 1.00 1 1 0 0
.............................................................CACTCAGTAAGGCATTGTA.................................................................................................... 19 1 1 1.00 1 1 0 0

Anti-sense strand reads

ACAAAACGTAAGTACAATTCTTCTACTCAACGATGGAAGTTACTACAATACATGTCATGGAGTGAGTCATTCCGTAACAAGAAGATATGATTATTTACTTGTCGCGGAAAGACACATCGCATTACACGTTGGACCTGTCGTAAACATCATCGTAACTACCATTCGAAATCAGTGTCTAGT
***********************************************...((((((.(((((.((.(((.(((((.((((((...(((....)))...)))))).))))).))).)))).))).))))))....**********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:52 PM