ID:rno-mir-200c |
Coordinate:chr4:157236786-157236854 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -57.0 |
 |
|
GCTTGGGCTTTACCAGGGCTGATCCTGAAGGTGGACTGGTTGGGTAGGGGCCCTCGTCTTACCCAGCAGTGTTTGGGTGCTGGTTGGGAGTCTCTAATACTGCCGGGTAATGATGGAGGCCCCTGCCCCTGTGTCATCGGCGTCCATGGCGGTCCCTTGCTTTAGGCCC
***********************************......(((((((((((.(((((((((((.((((((((.(((.(((.......)))))).)))))))).)))))).))))).)))))))))))......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ..............................................................................................TAATACTGCCGGGTAATGATGGA.................................................... | 23 | 0 | 1 | 84.00 | 84 | 75 | 8 | 1 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGAA................................................... | 24 | 1 | 1 | 17.00 | 17 | 16 | 0 | 1 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGAT................................................... | 24 | 1 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGG..................................................... | 22 | 0 | 1 | 11.00 | 11 | 5 | 6 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGT.................................................... | 23 | 1 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGAAT.................................................. | 25 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ................................................................................................ATACTGCCGGGTAATGATGGA.................................................... | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...............................................................................................AATACTGCCGGGTAATGATGGA.................................................... | 22 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGAAA.................................................. | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................CTAATACTGCCGGGTAATGATGGAT................................................... | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................ATACTGCCGGGTAATGATGGAA................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGTA................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTCATGATGGA.................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................CTAATACTGCCGGGTAATGATGGATT.................................................. | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................CGGCTAATACTGCCGGGTAATGATGG..................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGCTGGAT................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................ATAACACTGCCGGGTAATGATGGT.................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGATT.................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................CAAAACTGCCGGGTAATGATGG..................................................... | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGCTGGA.................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................ATAATACTGCCGGGTAATGATCGA.................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGGTAT.................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGTAA................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGCTGGTT................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGA........................................................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................ACTAATACTGCCGGGTAATGATGGA.................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGATGTA.................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................ACTGCCGGGTAATGATGGT.................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ..............................................................................................TAATACTGCCGGGAAATGATGGAA................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGACGGGTAATGATGG..................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .................................................................................................TACTGCCGGGTAATGATGGA.................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................AATACTGCCGGGTAATGATGG..................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................CTAATACTGCCGGGTAATGATGGA.................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGCAATGATGGAA................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCAGGTAATGATGGA.................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TACTACTGCCGGGTACTGATGG..................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................TAATACTGCCGGGTAATGTA....................................................... | 20 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................GAATAATACTGCCGGGTAATGATG...................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..................................................................................................ACTGCTGGGTAATGATGGA.................................................... | 19 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 |
|
CGAACCCGAAATGGTCCCGACTAGGACTTCCACCTGACCAACCCATCCCCGGGAGCAGAATGGGTCGTCACAAACCCACGACCAACCCTCAGAGATTATGACGGCCCATTACTACCTCCGGGGACGGGGACACAGTAGCCGCAGGTACCGCCAGGGAACGAAATCCGGG
***********************************......(((((((((((.(((((((((((.((((((((.(((.(((.......)))))).)))))))).)))))).))))).)))))))))))......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:44 PM