ID:

rno-mir-200b

 Coordinate:

chr5:173490144-173490238 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-54.1 -54.1 -54.0 -54.0

Sense Strand Reads

TGCCCGTGGAATCTAGTCATCTTCAACTCCCTGCTAGGCGGCCTCCATATCCAACTTGGGCAGCCGTGGCCATCTTACTGGGCAGCATTGGATAGTGTCTGATCTCTAATACTGCCTGGTAATGATGACGGCGGAGCCCTGCACGCAGCAATGGAGCCGCCTCCTGATCCCAGCCTCCAGGGGCTCCAGTTCCAC
***********************************..((.((.((((..........((((.(((((...(((((((((((((((.((((((............)))))).))))))))))).)))))))))...))))............)))))).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP
..........................................................................................................TAATACTGCCTGGTAATGATGAC.................................................................. 23 0 1 62.00 62 62 0
..........................................................................................................TAATACTGCCTGGTAATGATGACA................................................................. 24 1 1 28.00 28 28 0
..........................................................................................................TAATACTGCCTGGTAATGATGACT................................................................. 24 1 1 16.00 16 16 0
..........................................................................................................TAATACTGCCTGGTAATGATGA................................................................... 22 0 1 8.00 8 7 1
...........................................................................................................AATACTGCCTGGTAATGATGACT................................................................. 23 1 1 4.00 4 4 0
............................................................................................................ATACTGCCTGGTAATGATGAC.................................................................. 21 0 1 3.00 3 3 0
...........................................................................................................AATACTGCCTGGTAATGATGACA................................................................. 23 1 1 3.00 3 3 0
.........................................................................................................ATAATACTGCCTGGTAATGATGAC.................................................................. 24 1 1 3.00 3 3 0
..........................................................................................................TAATACTGCCTGGTAATGATG.................................................................... 21 0 1 2.00 2 2 0
..........................................................................................................TAATACTGCCTGGTAATGATGAAA................................................................. 24 2 1 2.00 2 2 0
..........................................................................................................TAATACTGCCTGGTGATGATGAC.................................................................. 23 1 1 1.00 1 1 0
............................................................................................................ATACTGCCTGGTAATGATAA................................................................... 20 1 1 1.00 1 1 0
..........................................................................................................TAATACTGCCTAGTAATGATGACT................................................................. 24 2 1 1.00 1 1 0
..........................................................................................................TAATACTGCCTGGTAATGATGACG................................................................. 24 0 1 1.00 1 1 0
..........................................................................................................TAATTCTGCCTGGTCATGATGAC.................................................................. 23 2 1 1.00 1 1 0
......................................................................CATCTTACTGGGCAGCATTGGAA...................................................................................................... 23 1 1 1.00 1 1 0
..........................................................................................................TAATACTGCCTGGAAATGATGAC.................................................................. 23 1 1 1.00 1 1 0
...........................................................................................................AATACTGCCTGGTAATGATGA................................................................... 21 0 1 1.00 1 1 0
..........................................................................................................TAATACTGCCTGGTAATGATGACTTCT.............................................................. 27 3 1 1.00 1 1 0
..........................................................................................................TAATACTGCCTGGTAATGATGACTT................................................................ 25 2 1 1.00 1 1 0
..........................................................................................................TAATACCGCCTGGTAATGATGCC.................................................................. 23 2 1 1.00 1 1 0

Anti-sense strand reads

ACGGGCACCTTAGATCAGTAGAAGTTGAGGGACGATCCGCCGGAGGTATAGGTTGAACCCGTCGGCACCGGTAGAATGACCCGTCGTAACCTATCACAGACTAGAGATTATGACGGACCATTACTACTGCCGCCTCGGGACGTGCGTCGTTACCTCGGCGGAGGACTAGGGTCGGAGGTCCCCGAGGTCAAGGTG
***********************************..((.((.((((..........((((.(((((...(((((((((((((((.((((((............)))))).))))))))))).)))))))))...))))............)))))).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:46 PM