ID:

rno-mir-19b-1

 Coordinate:

chr15:100180464-100180550 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.1 -38.9 -38.5
mature
  1. chr15:100180517-100180539 +
  2. chrX:140117391-140117413 -
star

Sense Strand Reads

AGCTGTAAGCTCCAGCCTCGGCCCGTCGCCGTCCGACTGTCCGTACTGAGCACTGGTCTATGGTTAGTTTTGCAGGTTTGCATCCAGCTGTATAATATTCTGCTGTGCAAATCCATGCAAAACTGACTGTGGTGGTGAAAAGTCTGTAGAGACGTAAGGGAAAATCAAACCCCTTTCTACACAGGTT
**************************************************((((...(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))).))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.......................................................................................................TGTGCAAATCCATGCAAAACTGA............................................................. 23 0 2 21357.50 42715 33609 8941 165
.......................................................................................................TGTGCAAATCCATGCAAAACTG.............................................................. 22 0 2 1812.50 3625 3392 197 36
.......................................................................................................TGTGCAAATCCATGCAAAACTGAA............................................................ 24 1 2 1524.00 3048 2119 914 15
........................................................................................................GTGCAAATCCATGCAAAACTGA............................................................. 22 0 2 1352.00 2704 2442 260 2
.......................................................................................................TGTGCAAATCCATGCAAAACTGT............................................................. 23 1 2 897.50 1795 1713 64 18
.......................................................................................................TGTGCAAATCCATGCAAAACT............................................................... 21 0 2 795.00 1590 1300 283 7
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAA........................................................... 25 2 2 564.00 1128 403 725 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGA............................................................. 24 1 2 291.50 583 306 275 2
.......................................................................................................TGTGCAAATCCATGCAAAAC................................................................ 20 0 2 219.00 438 319 119 0
.......................................................................................................TGTGCAAATCCATGCAAACCTGA............................................................. 23 1 2 139.00 278 272 3 3
.................................................................AGTTTTGCAGGTTTGCATCCAGC................................................................................................... 23 0 1 129.00 129 122 7 0
.......................................................................................................TGTGCAAATCCATGCACAACTGA............................................................. 23 1 2 91.50 183 179 4 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAT........................................................... 25 1 2 91.50 183 171 12 0
.......................................................................................................TGTGCAAATCCATGCAAAA................................................................. 19 0 2 89.00 178 124 48 6
.......................................................................................................TGTGCAAATCCCTGCAAAACTGA............................................................. 23 1 2 76.00 152 144 7 1
........................................................................................................GTGCAAATCCATGCAAAACTG.............................................................. 21 0 2 74.50 149 147 2 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGAA............................................................ 25 2 2 72.50 145 109 36 0
.......................................................................................................TGCGCAAATCCATGCAAAACTGA............................................................. 23 1 2 66.00 132 97 33 2
.................................................................AGTTTTGCAGGTTTGCATCCAGT................................................................................................... 23 1 1 63.00 63 62 1 0
.......................................................................................................TGTGCAAATCCATACAAAACTGA............................................................. 23 1 2 50.50 101 98 3 0
.......................................................................................................TGTGCAAATCCATGCAAAACTCA............................................................. 23 1 2 50.50 101 95 5 1
........................................................................................................GTGCAAATCCATGCAAAACTGAA............................................................ 23 1 2 50.50 101 75 26 0
......................................................................................................ATGTGCAAATCCATGCAAAACTG.............................................................. 23 1 2 49.00 98 88 10 0
.......................................................................................................TGTGCAAATCCATGCAAAACTAA............................................................. 23 1 2 48.00 96 90 4 2
........................................................................................................GTGCAAATCCATGCAAAACTGT............................................................. 22 1 2 46.00 92 91 1 0
.................................................................AGTTTTGCAGGTTTGCATCCAGA................................................................................................... 23 1 1 46.00 46 44 2 0
.......................................................................................................TGTGCAAATCCATGAAAAACTGA............................................................. 23 1 2 45.50 91 67 24 0
.......................................................................................................TGTGCAAATCCATCCAAAACTGA............................................................. 23 1 2 44.50 89 81 5 3
.......................................................................................................TGGGCAAATCCATGCAAAACTGA............................................................. 23 1 2 41.50 83 40 43 0
.................................................................AGTTTTGCAGGTTTGCATCCAG.................................................................................................... 22 0 1 38.00 38 37 1 0
.......................................................................................................TGAGCAAATCCATGCAAAACTGA............................................................. 23 1 2 37.50 75 42 33 0
.......................................................................................................TGTGCAAATCAATGCAAAACTGA............................................................. 23 1 3 34.00 102 87 15 0
......................................................................................................ATGTGCAAATCCATGCAAAACT............................................................... 22 1 2 31.50 63 52 11 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGT............................................................. 24 2 2 31.00 62 59 3 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAC............................................................ 24 0 1 31.00 31 28 3 0
........................................................................................................GTGCAAATCCATGCAAAACT............................................................... 20 0 2 31.00 62 57 5 0
.......................................................................................................TTTGCAAATCCATGCAAAACTGA............................................................. 23 1 2 30.00 60 14 46 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAAA.......................................................... 26 3 2 30.00 60 6 54 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAG............................................................ 24 1 2 29.00 58 58 0 0
....................................................................................................TGATGTGCAAATCCATGCAAAAC................................................................ 23 1 1 29.00 29 25 4 0
.......................................................................................................TGTGCAACTCCATGCAAAACTGA............................................................. 23 1 2 28.50 57 53 3 1
.......................................................................................................TGTACAAATCCATGCAAAACTGA............................................................. 23 1 2 26.00 52 44 8 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGAAA........................................................... 26 3 2 25.50 51 21 30 0
........................................................................................................GTGCAAATCCATGCAAAACTGC............................................................. 22 1 2 23.00 46 46 0 0
.......................................................................................................TGTGCAAATCGATGCAAAACTGA............................................................. 23 1 3 22.67 68 25 43 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGC............................................................. 23 1 2 22.50 45 33 11 1
.................................................................AGTTTTGCAGGTTTGCATCCAGCT.................................................................................................. 24 0 1 22.00 22 22 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTTA............................................................. 23 1 2 21.00 42 37 4 1
.................................................................AGTTTTGCAGGTTTGCATCCA..................................................................................................... 21 0 1 21.00 21 20 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGTA............................................................ 24 2 2 19.50 39 37 2 0
.......................................................................................................TCTGCAAATCCATGCAAAACTGA............................................................. 23 1 2 18.50 37 16 21 0
.......................................................................................................TATGCAAATCCATGCAAAACTGA............................................................. 23 1 2 18.50 37 15 22 0
......................................................................................................ATGTGCAAATCCATGCAAAAC................................................................ 21 1 2 18.00 36 14 22 0
.......................................................................................................TGTGCAAATCCCTGAAAAACTGA............................................................. 23 2 2 17.50 35 35 0 0
.......................................................................................................TGTGCAAATCCTTGCAAAACTGA............................................................. 23 1 2 16.50 33 33 0 0
.......................................................................................................TGTGCAAATCCATTCAAAACTGA............................................................. 23 1 2 16.50 33 24 9 0
.......................................................................................................TGTGCAAATCTATGCAAAACTGAAT........................................................... 25 2 4 15.75 63 60 3 0
.......................................................................................................TGTCCAAATCCATGCAAAACTGA............................................................. 23 1 2 15.00 30 21 9 0
........................................................................................................GTGCAAATCCATGCAAAACTGAAA........................................................... 24 2 2 15.00 30 13 17 0
.......................................................................................................CGTGCAAATCCATGCAAAACTGA............................................................. 23 1 2 14.50 29 21 6 2
.......................................................................................................TGTGCAAATCCACGCAAAACTGA............................................................. 23 1 2 13.50 27 24 3 0
.......................................................................................................TGTGCAAATCCGTGCAAAACTGA............................................................. 23 1 2 13.50 27 25 1 1
.......................................................................................................TGTGCAAATCCATGTAAAACTGA............................................................. 23 1 2 13.00 26 9 16 1
.......................................................................................................TGTGCAAATCCATGCAAAACTGAGA........................................................... 25 2 2 13.00 26 20 6 0
........................................................................................................GTGCAAATCCATGCCAAACTGA............................................................. 22 1 2 12.50 25 25 0 0
.......................................................................................................AGTGCAAATCCATGCAAAACTGA............................................................. 23 1 2 12.50 25 22 3 0
.......................................................................................................TGTGCAAATCCATGCAAAACTA.............................................................. 22 1 2 12.00 24 24 0 0
..................................................................................................ACTGATGTGCAAATCCATGCAAA.................................................................. 23 2 1 12.00 12 11 1 0
........................................................................................................GTGCAAATCCATGAAAAACTGA............................................................. 22 1 2 12.00 24 24 0 0
.......................................................................................................TGTGAAAATCCATGCAAAACTGA............................................................. 23 1 2 11.50 23 17 6 0
.......................................................................................................TGTTCAAATCCATGCAAAACTGA............................................................. 23 1 2 11.50 23 9 14 0
..................................................................................................TCAAATGTGCAAATCCATGCAAAACTGA............................................................. 28 3 1 11.00 11 11 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACCGA............................................................. 23 1 2 11.00 22 16 6 0
.......................................................................................................TGTGCCAATCCATGCAAAACTGA............................................................. 23 1 2 11.00 22 13 9 0
.......................................................................................................TGTGCAAACCCATGCAAAACTGA............................................................. 23 1 2 11.00 22 14 8 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAG........................................................... 25 2 3 10.67 32 25 7 0
........................................................................................................GTGCAAATCCCTGCAAAACTGA............................................................. 22 1 2 10.50 21 21 0 0
.......................................................................................................TGTGCAAATCCATGCAAA.................................................................. 18 0 2 10.50 21 7 14 0
.......................................................................................................TGTGCACATCCATGCAAAACTGA............................................................. 23 1 2 10.00 20 17 3 0
.......................................................................................................TGTGCAAATCCATGCAAAAATGA............................................................. 23 1 2 9.50 19 10 9 0
........................................................................................................GTGCAAATCCATGCAAAAC................................................................ 19 0 2 9.50 19 13 6 0
.......................................................................................................TGTGCAAATCCATGCAACACTGA............................................................. 23 1 2 9.00 18 14 4 0
.................................................................AGTTTTGCAGGTTTGCATCCAGCA.................................................................................................. 24 1 1 9.00 9 9 0 0
.......................................................................................................TGTGCAAATCCATGCACAACTGAA............................................................ 24 2 2 9.00 18 17 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAAT.......................................................... 26 3 2 9.00 18 15 3 0
.......................................................................................................TGTGCAAATACATGCAAAACTGA............................................................. 23 1 2 9.00 18 15 3 0
.......................................................................................................TGTACAAATCCATGCACAACTGA............................................................. 23 2 2 8.50 17 16 0 1
.......................................................................................................TGTGCAAATCCATGCAAACCTG.............................................................. 22 1 2 8.50 17 17 0 0
.......................................................................................................TGTGCAAAACCATGCAAAACTGA............................................................. 23 1 2 8.50 17 15 2 0
.......................................................................................................TGTGCAAATCCATGCAAACCTGAA............................................................ 24 2 2 8.50 17 17 0 0
.......................................................................................................TGTGCAAATCCCTGCAAAACTG.............................................................. 22 1 2 8.00 16 15 0 1
........................................................................................................GTGCAAATCCACGCAAAACTGA............................................................. 22 1 2 8.00 16 16 0 0
.......................................................................................................TGTGCAAATCCATGGAAAACTGA............................................................. 23 1 2 8.00 16 4 11 1
.................................................................AGTTTTGCAGGTTTGCATCCAGCAT................................................................................................. 25 2 1 8.00 8 8 0 0
.....................................................................................................AATGTGCAAATCCATGCAAAACTGA............................................................. 25 2 2 7.50 15 12 3 0
............................................................................................................AAATCCATGCAAAACTGA............................................................. 18 0 3 7.33 22 6 16 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGG............................................................. 23 1 2 7.00 14 13 1 0
......................................................................................................CTGTGCAAATCCATGCAAAACTGA............................................................. 24 0 2 7.00 14 12 2 0
.......................................................................................................TGTGCAAATCCATGCAGAACTGA............................................................. 23 1 2 7.00 14 13 1 0
.................................................................AGTTTTGCAGGTTTGCATCCAAA................................................................................................... 23 2 2 7.00 14 14 0 0
.............................................................................................................AATCCATGCAAAACTGA............................................................. 17 0 4 6.75 27 0 27 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGTAA........................................................... 25 3 2 6.50 13 13 0 0
.......................................................................................................TGTGCAAATCCATGCACAACTG.............................................................. 22 1 2 6.50 13 12 0 1
.......................................................................................................TGTGTAAATCCATGCAAAACTGA............................................................. 23 1 2 6.50 13 10 3 0
.......................................................................................................TGTGCAAATCCATGCAAAACTT.............................................................. 22 1 2 6.00 12 10 2 0
.......................................................................................................TGTGCAAATCCATGCACAACTGT............................................................. 23 2 2 6.00 12 12 0 0
........................................................................................................GTGCAAATCCATGCAACACTGA............................................................. 22 1 3 6.00 18 17 1 0
...................................................................................................CTGATGTGCAAATCCATGCAAAA................................................................. 23 1 1 6.00 6 5 1 0
.......................................................................................................TGTGCAAATCCCTGCAAAACTGAA............................................................ 24 2 2 6.00 12 11 0 1
.......................................................................................................GGTGCAAATCCATGCAAAACTGA............................................................. 23 1 2 6.00 12 8 4 0
........................................................................................................GAGCAAATCCATGCAAAACTGA............................................................. 22 1 2 6.00 12 11 1 0
.................................................................AGTTTTGCAGGTTTGCATCCAGCTT................................................................................................. 25 1 1 6.00 6 6 0 0
.......................................................................................................TGTGCAAATCCATGCAAAAA................................................................ 20 1 3 5.67 17 13 4 0
.......................................................................................................TGTGCAAATCCATGCAAACCTCA............................................................. 23 2 2 5.50 11 11 0 0
.......................................................................................................TGTGCAAATCCCTGGAAAACTGA............................................................. 23 2 2 5.50 11 11 0 0
........................................................................................................GTGCAAATCCATGCAAAA................................................................. 18 0 2 5.50 11 6 5 0
.......................................................................................................TGTGCAAATCCCTGCAAAACT............................................................... 21 1 2 5.50 11 11 0 0
........................................................................................................GTGCAAATCCATGTAAAACTGA............................................................. 22 1 2 5.50 11 11 0 0
.....................................................................................................GATGTGCAAATCCATGCAAAACT............................................................... 23 1 2 5.50 11 8 3 0
........................................................................................................GGGCAAATCCATGCAAAACTGA............................................................. 22 1 2 5.50 11 6 5 0
..............................................................................................................ATCCATGCAAAACTGA............................................................. 16 0 5 5.20 26 0 26 0
.......................................................................................................TGTGCAAATCCATGCCAAACTGA............................................................. 23 1 2 5.00 10 6 4 0
.......................................................................................................TGTGCAAATCCATGCAAAACTAT............................................................. 23 2 2 5.00 10 10 0 0
.......................................................................................................TGTGCAAATTCATGCAAAACTGA............................................................. 23 1 2 5.00 10 6 4 0
.......................................................................................................TGTGCAAATCCCTGCAAAACTGG............................................................. 23 2 2 5.00 10 10 0 0
....................................................................................................TGATGTGCAAATCTATGCAAAAC................................................................ 23 2 2 5.00 10 7 3 0
......................................................................................................CAGTGCAAATCCATGCAAAACTGA............................................................. 24 1 2 5.00 10 10 0 0
........................................................................................................GTGCAAATCCATGCAAAACTGAAT........................................................... 24 1 2 5.00 10 10 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAT.................................................................................................... 22 1 1 5.00 5 5 0 0
.......................................................................................................TGTGCGAATCCATGCAAAACTGA............................................................. 23 1 2 5.00 10 8 2 0
.................................................................AGTTTTGCAGGTTTGCATCCAGTA.................................................................................................. 24 2 1 5.00 5 5 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAA.................................................................................................... 22 1 1 5.00 5 5 0 0
.......................................................................................................TGTGCAAATCCCTGCAAAACTGT............................................................. 23 2 4 4.75 19 17 0 2
.......................................................................................................TGTGCAAATCCATGCAAACCTGT............................................................. 23 2 3 4.67 14 14 0 0
.......................................................................................................TGCGCAAATCCATGCAAAACTG.............................................................. 22 1 2 4.50 9 9 0 0
.......................................................................................................TGTGCAAATCCATACAAAACTG.............................................................. 22 1 2 4.50 9 7 2 0
.......................................................................................................TGTGCAAATCCATGCAAATCTGA............................................................. 23 1 2 4.50 9 9 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTTAA............................................................ 24 2 2 4.50 9 6 3 0
.......................................................................................................TGTGCAAATCCATGCAAAACTCAA............................................................ 24 2 2 4.50 9 8 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTC.............................................................. 22 1 2 4.50 9 8 1 0
.....................................................................................................TGTGTGCAAATCCATGCAAAAC................................................................ 22 2 3 4.33 13 11 2 0
.......................................................................................................TGTGCAAATCCATGCATAACTGA............................................................. 23 1 2 4.00 8 8 0 0
........................................................................................................GTCCAAATCCATGCAAAACTGA............................................................. 22 1 2 4.00 8 7 1 0
.................................................................AGTTTTGCAGGTTTGCATCCAGG................................................................................................... 23 1 1 4.00 4 4 0 0
......................................................................................................ATGTGCAAATCCATGCAACACTGA............................................................. 24 2 2 4.00 8 8 0 0
.......................................................................................................TGTGCAAATCCATGAAAAACTG.............................................................. 22 1 2 4.00 8 7 0 1
.......................................................................................................TGTGCAAATCCATGCACAACTCA............................................................. 23 2 2 4.00 8 8 0 0
.......................................................................................................TGTGCAAATCCATGAAAAACTGAA............................................................ 24 2 2 4.00 8 5 2 1
.......................................................................................................TGTGCAAATCCATGCAAACCT............................................................... 21 1 2 4.00 8 8 0 0
.......................................................................................................TGTGCAAGTCCATGCAAAACTGA............................................................. 23 1 2 4.00 8 8 0 0
..................................................................GTTTTGCAGGTTTGCATCCAGT................................................................................................... 22 1 1 4.00 4 4 0 0
........................................................................................................GTGCAAATCCATGCAAAACTGG............................................................. 22 1 2 4.00 8 8 0 0
......................................................................................................ATGTGCAAATCCATGCAAAA................................................................. 20 1 2 4.00 8 3 5 0
.......................................................................................................TGTGCAAATCCAAGCAAAACTGA............................................................. 23 1 2 4.00 8 7 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTCT............................................................. 23 2 2 4.00 8 6 1 1
.......................................................................................................TGTGCAAATCCATGCACAACTAA............................................................. 23 2 2 3.50 7 7 0 0
.......................................................................................................TGTGCAGATCCATGCAAAACTGA............................................................. 23 1 2 3.50 7 6 1 0
........................................................................................................GTGAAAATCCATGCAAAACTGA............................................................. 22 1 2 3.50 7 6 1 0
.......................................................................................................TGTGCAAATCCCTGTAAAACTGA............................................................. 23 2 2 3.50 7 7 0 0
.....................................................................................................AATGTGCAAATCCATGCAAAACT............................................................... 23 2 2 3.50 7 5 1 1
.......................................................................................................TGTGGAAATCCATGCAAAACTGA............................................................. 23 1 2 3.50 7 6 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAACG.......................................................... 26 2 2 3.50 7 0 0 7
.......................................................................................................TGTGCAAATCCATGCAAAACTGAAC........................................................... 25 2 2 3.50 7 2 5 0
.........................................................................................................TGCAAATCCATGCAAAACTGA............................................................. 21 0 2 3.50 7 1 6 0
.......................................................................................................TGTACAAATCCATGCAAAACTG.............................................................. 22 1 2 3.50 7 6 1 0
.......................................................................................................TGTGCATATCCATGCAAAACTGA............................................................. 23 1 2 3.50 7 5 1 1
.......................................................................................................TGTGCAAATCCCTGCAAAACTGC............................................................. 23 2 2 3.50 7 7 0 0
.....................................................................................................AATGTGCAAATCCATGCAAAACTG.............................................................. 24 2 2 3.50 7 6 1 0
.......................................................................................................TGTGCAAATCCATCCAAAACTGAA............................................................ 24 2 2 3.00 6 4 2 0
........................................................................................................GTGCAAATCCAAGCAAAACTGA............................................................. 22 1 3 3.00 9 9 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTAAA............................................................ 24 2 2 3.00 6 5 1 0
..................................................................GTTTTGCAGGTTTGCATCCAG.................................................................................................... 21 0 1 3.00 3 3 0 0
.......................................................................................................TGGGCAAATCCATGCAAAACT............................................................... 21 1 2 3.00 6 4 2 0
.................................................................AGTTTTGCAGGTTTGCATCC...................................................................................................... 20 0 1 3.00 3 3 0 0
.......................................................................................................TGTGCAAATCAATGCAAAACTG.............................................................. 22 1 4 3.00 12 12 0 0
...................................................................................................CTGATGTGCAAATCCATGCAAA.................................................................. 22 1 1 3.00 3 3 0 0
.......................................................................................................TGTGCAAATCCATGCAAAGCTGA............................................................. 23 1 2 3.00 6 4 2 0
.......................................................................................................TGCGCAAATCCATGCAAAACT............................................................... 21 1 2 3.00 6 5 1 0
........................................................................................................GCGCAAATCCATGCAAAACTGA............................................................. 22 1 2 3.00 6 6 0 0
....................................................................................................TGTTGTGCAAATCCATGCAAAAC................................................................ 23 1 1 3.00 3 1 2 0
.......................................................................................................TGTGCAAATCTATGCAAAACTGAC............................................................ 24 1 2 3.00 6 6 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACAGA............................................................. 23 1 2 3.00 6 5 1 0
.......................................................................................................TGGGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 3.00 6 0 6 0
.................................................................AGTTTTGCAGGTTTGCATCCAGAA.................................................................................................. 24 2 1 3.00 3 3 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAGTAA................................................................................................. 25 3 1 3.00 3 3 0 0
...........................................................................................................CAAATCCATGCAAAACTGA............................................................. 19 0 2 3.00 6 2 4 0
......................................................................................................TTGTGCAAATCCATGCAAAACTGA............................................................. 24 1 3 2.67 8 7 1 0
.......................................................................................................TGTGCAAATCCATGTAAAACTG.............................................................. 22 1 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATCCATGCAAAATTGA............................................................. 23 1 2 2.50 5 4 1 0
.......................................................................................................TGTGCAAATCCATGCAAACCTTA............................................................. 23 2 2 2.50 5 5 0 0
........................................................................................................GTGCAAACCCATGCAAAACTGA............................................................. 22 1 2 2.50 5 4 1 0
.......................................................................................................TGTGCAAATCCATGCGAAACTGA............................................................. 23 1 2 2.50 5 3 2 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGAGT........................................................... 25 1 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATGCATGCAAAACTGA............................................................. 23 1 2 2.50 5 2 3 0
........................................................................................................GTGCAAATCCGTGCAAAACTGA............................................................. 22 1 2 2.50 5 4 1 0
.......................................................................................................TGTGCAAATTCATGCAAAACTGAA............................................................ 24 2 2 2.50 5 1 4 0
.......................................................................................................TGTGCTAATCCATGCAAAACTGA............................................................. 23 1 2 2.50 5 2 3 0
.......................................................................................................TGAGCAAATCCATGCAAAACTG.............................................................. 22 1 2 2.50 5 5 0 0
........................................................................................................GTGCAAATCCATGCAAAACTGAAAA.......................................................... 25 3 2 2.50 5 0 5 0
.......................................................................................................TGTGCAAAACCATGCAAAACTG.............................................................. 22 1 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATCCATGCACAACGGA............................................................. 23 2 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATCCATTCAAAACTGAA............................................................ 24 2 2 2.50 5 3 2 0
........................................................................................................GTGCCAATCCATGCAAAACTGA............................................................. 22 1 2 2.50 5 5 0 0
.......................................................................................................TGCGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 2.50 5 4 1 0
.......................................................................................................TGTGCAAATCCATCCAAAACTG.............................................................. 22 1 2 2.50 5 5 0 0
......................................................................................................GTGTGCAAATCCATGCAAAACT............................................................... 22 1 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGTAT........................................................... 25 2 2 2.50 5 5 0 0
........................................................................................................GTGCAAATCCATGCAAAACTGAG............................................................ 23 1 2 2.50 5 5 0 0
.......................................................................................................CGTGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 2.50 5 3 1 1
......................................................................................................CTGTGCAAATCCATGCAAAACTG.............................................................. 23 0 2 2.50 5 5 0 0
.......................................................................................................TGTGCAAATCCATGCACAACAGA............................................................. 23 2 4 2.50 10 10 0 0
.......................................................................................................TGTGCAAATCAATGCAAAACTGAA............................................................ 24 2 4 2.25 9 8 1 0
.......................................................................................................TGTGCAATTCCATGCAACACTGA............................................................. 23 2 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATGCAAACCTAA............................................................. 23 2 3 2.00 6 6 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAGCTG................................................................................................. 25 0 1 2.00 2 2 0 0
.......................................................................................................TGGGCAAATCCATGCAAAACTGAAA........................................................... 25 3 2 2.00 4 0 4 0
.......................................................................................................TGCGCAAATCCATACAAAACTGA............................................................. 23 2 2 2.00 4 4 0 0
........................................................................................................GTGCAAATCCATGCGAAACTGA............................................................. 22 1 2 2.00 4 2 2 0
........................................................................................................TTGCAAATCCATGCAAAACTGA............................................................. 22 1 2 2.00 4 4 0 0
.................................................................AGTTTTGCCGGTTTGCATCCAGC................................................................................................... 23 1 1 2.00 2 2 0 0
.......................................................................................................TGTGCAAATCCTTGCAAAACTG.............................................................. 22 1 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATGAAAAACT............................................................... 21 1 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCGATGCAAAACTGAA............................................................ 24 2 3 2.00 6 0 6 0
.......................................................................................................TGTGCAACTCCATGCAAAACTG.............................................................. 22 1 2 2.00 4 4 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAGCTTTT............................................................................................... 27 2 1 2.00 2 2 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAGCTGTAT.............................................................................................. 28 0 1 2.00 2 2 0 0
.......................................................................................................TGCGCAAATCCATGCAAAACTGT............................................................. 23 2 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATTCAAAACTG.............................................................. 22 1 2 2.00 4 3 0 1
.......................................................................................................TGTGCAAATCCATGCAAAACTGACA........................................................... 25 1 1 2.00 2 1 1 0
.......................................................................................................CGTGCAAATCCATGCAAAACTGT............................................................. 23 2 2 2.00 4 4 0 0
.......................................................................................................TGTCCAAATCCATGCAAAACTGAA............................................................ 24 2 2 2.00 4 2 2 0
.......................................................................................................TTTGCAAATCCATGCAAAACTG.............................................................. 22 1 2 2.00 4 3 1 0
......................................................................................................ATGTGCAAATCCATGCCAAACTGA............................................................. 24 2 2 2.00 4 4 0 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGACA........................................................... 26 2 1 2.00 2 2 0 0
...................................................................................................CAAATGTGCAAATCCATGCAAAACTGA............................................................. 27 3 1 2.00 2 2 0 0
..........................................................................................................GCAAATCCATGCAAAACTGA............................................................. 20 0 2 2.00 4 3 1 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGACT........................................................... 25 0 1 2.00 2 2 0 0
.......................................................................................................TGCGCAAATCCATGCAAAACTGAAA........................................................... 25 3 2 2.00 4 2 2 0
.......................................................................................................TGTGCAAATCGATGCAAAACTG.............................................................. 22 1 3 2.00 6 5 0 1
......................................................................................................ATGTGCAAATCCATGCAAAACCGA............................................................. 24 2 2 2.00 4 4 0 0
.......................................................................................................TTTGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 2.00 4 2 2 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGACTTT......................................................... 27 1 1 2.00 2 2 0 0
.................................................................AGTTTTGCAGGTTTGCATCCAGTT.................................................................................................. 24 1 1 2.00 2 2 0 0
...................................................................TTTTGCAGGTTTGCATCCAGCT.................................................................................................. 22 0 1 2.00 2 2 0 0
.......................................................................................................TGTTCAAATCCATGCAAAACTG.............................................................. 22 1 2 2.00 4 3 1 0
........................................................................................................GTGCAAATCCATGCAAAACTGTA............................................................ 23 2 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATACAAAACT............................................................... 21 1 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTGCA............................................................ 24 2 2 2.00 4 4 0 0
.......................................................................................................TGTGCAAATCCATGAAAAACTGAAA........................................................... 25 3 3 1.67 5 2 3 0
...............................................................................................................TCCATGCAAAACTGA............................................................. 15 0 10 1.60 16 0 16 0
......................................................................................................ATGTGCAAATCCATCCAAAACTGA............................................................. 24 2 2 1.50 3 0 3 0
.......................................................................................................CGTGCAAATCCATGCAAAACTGAAA........................................................... 25 3 2 1.50 3 0 3 0
.......................................................................................................TGTGCAAATCCATGCAGAACAGA............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................GGTGCAAATCCATGCAAAACTGC............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATACATGCAAAACTGAA............................................................ 24 2 2 1.50 3 3 0 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGAG............................................................ 25 2 2 1.50 3 3 0 0
.......................................................................................................TGCGCAAATCCTTGCAAAACTGA............................................................. 23 2 2 1.50 3 3 0 0
..........................................................................................................GCAAATCCATGCAAAACTGAATGT......................................................... 24 1 2 1.50 3 3 0 0
......................................................................................................ATGTGCAAATACATGCAAAACTG.............................................................. 23 2 2 1.50 3 2 1 0
.......................................................................................................TGTGCCAATCCATGCAAAACTGAA............................................................ 24 2 2 1.50 3 2 1 0
.......................................................................................................TGTGCAAAGCCATGCAAAACTGA............................................................. 23 1 2 1.50 3 2 1 0
.......................................................................................................TATGCAAATCCATGCAAAACTG.............................................................. 22 1 2 1.50 3 3 0 0
.....................................................................................................ACTGTGCAAATCCATGCAAAACTGAAA........................................................... 27 3 2 1.50 3 3 0 0
......................................................................................................ATGTGCAAATCCATGCAAAACTGAAT........................................................... 26 2 2 1.50 3 2 1 0
.......................................................................................................TGTGCAATTCCATGCAAAACTGA............................................................. 23 1 2 1.50 3 3 0 0
.......................................................................................................TGTCCAAATCCATGCAAAACTGT............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATGTAAAACTGAA............................................................ 24 2 2 1.50 3 0 3 0
......................................................................................................ATGTGCAAATCCATACAAAACTGA............................................................. 24 2 2 1.50 3 1 2 0
.......................................................................................................TGTGCACATCCATGCAAAACTG.............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATGCAAAACTTT............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATGCACAACT............................................................... 21 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCAACTCCATGCAAAACT............................................................... 21 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATGCAACACTG.............................................................. 22 1 2 1.50 3 2 1 0
........................................................................................................GTGCAAATCCATGCAAAAATGA............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................TGAGCAAATCCGTGCAAAACTGA............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................TGTGCAACTCCATGCAAAACTGT............................................................. 23 2 2 1.50 3 3 0 0
........................................................................................................GTGCGAATCCATGCAAAACTGA............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................GGTGCAAATCCCTGCAAAACTGG............................................................. 23 3 2 1.50 3 3 0 0
.......................................................................................................TGCGCAAATCCCTGCAAAACTGA............................................................. 23 2 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATGCAAAAATGAA............................................................ 24 2 2 1.50 3 1 2 0
.......................................................................................................GGTGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 1.50 3 2 1 0
........................................................................................................GTGCAAATACATGCAAAACTGA............................................................. 22 1 2 1.50 3 3 0 0
........................................................................................................GTGCAACTCCATGCAAAACTGA............................................................. 22 1 2 1.50 3 3 0 0
........................................................................................................GTGCAAATCCATGGAAAACTGA............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCGAATCCATGCAAAACTGT............................................................. 23 2 2 1.50 3 3 0 0
........................................................................................................GTGCAAATCCATGCAAAACCGA............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................TATGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 1.50 3 1 2 0
.......................................................................................................TGTGCAAATCCAGGCAAAACTGA............................................................. 23 1 2 1.50 3 3 0 0
........................................................................................................GTACAAATCCATGCAAAACTGA............................................................. 22 1 2 1.50 3 2 1 0
.......................................................................................................TGAGCAAATCCATGCAAAACTGAA............................................................ 24 2 2 1.50 3 1 2 0
.......................................................................................................TGTGCAAACCCATGCAAAACTG.............................................................. 22 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCATCCAAAACT............................................................... 21 1 2 1.50 3 3 0 0
.......................................................................................................TGTGCAAATCCCTGAAAAACTG.............................................................. 22 2 3 1.33 4 4 0 0
.......................................................................................................TGTACAAATCCATGCAAAACTGT............................................................. 23 2 3 1.33 4 2 1 1
.......................................................................................................AGTGCAAATCCATGCAAAACTGT............................................................. 23 2 3 1.33 4 4 0 0
....................................................................................................AAATGTGCAAATCCATGCAAAACTGA............................................................. 26 3 3 1.33 4 4 0 0
.......................................................................................................TGAGCAAATCCATGCAAAACTGT............................................................. 23 2 3 1.33 4 4 0 0
......................................................................................................ATGTGCAAATCCAAGCAAAACTGA............................................................. 24 2 3 1.33 4 4 0 0
.......................................................................................................TGTGCAAATCCATGCAAACCTGAAA........................................................... 25 3 7 1.29 9 8 1 0
......................................................................................................TTGTGCAAATCCATGCAAAAC................................................................ 21 1 4 1.25 5 5 0 0
.......................................................................................................TGTGCAAATCCATGCAA................................................................... 17 0 4 1.25 5 2 3 0

Anti-sense strand reads

TCGACATTCGAGGTCGGAGCCGGGCAGCGGCAGGCTGACAGGCATGACTCGTGACCAGATACCAATCAAAACGTCCAAACGTAGGTCGACATATTATAAGACGACACGTTTAGGTACGTTTTGACTGACACCACCACTTTTCAGACATCTCTGCATTCCCTTTTAGTTTGGGGAAAGATGTGTCCAA
**********************************************((((...(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))).))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM