ID:

rno-mir-19a

Coordinate:

chr15:100180162-100180243 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.1 -35.0 -34.7

Sense Strand Reads

TCATCCAACCCGAGGCAAGCAAGCGTGTAGGGGTCTCAATAGTTCTGTTTGCAGCCCTCTGTTCGTTTTGCATAGTTGCACTACAAGAAGAATGTAGTTGTGCAAATCTATGCAAAACTGATGGTGGCCTGCTATTTACTTCAAGTGTTGTTGTGGTTTGTTTTTAAACTAATTGTGTATTT
***********************************************...((((.((.(((((.(((((((((((((((((((((.......))))...))))))..))))))))))).))))).)).))))....**********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..................................................................................................TGTGCAAATCTATGCAAAACTGA............................................................. 23 0 1 8574.00 8574 6720 1830 24
.................................................................................................TTGTGCAAATCTATGCAAAACTGA............................................................. 24 0 1 1276.00 1276 1180 87 9
..................................................................................................TGTGCAAATCTATGCAAAACTGAT............................................................ 24 0 1 841.00 841 770 70 1
..................................................................................................TGTGCAAATCTATGCAAAACTG.............................................................. 22 0 1 635.00 635 620 15 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAA............................................................ 24 1 1 535.00 535 359 175 1
...................................................................................................GTGCAAATCTATGCAAAACTGA............................................................. 22 0 1 533.00 533 478 53 2
..................................................................................................TGTGCAAATCTATGCAAAACTGT............................................................. 23 1 1 400.00 400 391 8 1
.................................................................................................TTGTGCAAATCTATGCAAAACTG.............................................................. 23 0 1 378.00 378 374 3 1
..................................................................................................TGTGCAAATCTATGCAAAACT............................................................... 21 0 1 261.00 261 233 28 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAAA........................................................... 25 2 1 190.00 190 72 118 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGT............................................................. 24 1 1 163.00 163 158 4 1
.................................................................................................ATGTGCAAATCTATGCAAAACTGA............................................................. 24 1 1 143.00 143 91 52 0
.................................................................................................TTGTGCAAATCTATGCAAAACT............................................................... 22 0 1 87.00 87 71 16 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATT........................................................... 25 1 2 75.00 150 140 10 0
..................................................................................................TGTGCAAATCTATGCAAAAC................................................................ 20 0 1 71.00 71 59 12 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAT............................................................ 25 0 1 69.00 69 65 3 1
.................................................................................................TTGTGCAAATCTATGCAAAACTGAA............................................................ 25 1 1 58.00 58 52 6 0
...................................................................................................GTGCAAATCTATGCAAAACTGAT............................................................ 23 0 1 55.00 55 45 10 0
..................................................................................................TGTGCAAATCTATGCAAACCTGA............................................................. 23 1 1 49.00 49 49 0 0
..................................................................................................TGTGCAAATCTCTGCAAAACTGA............................................................. 23 1 1 41.00 41 40 1 0
..................................................................................................TGTGCAAATCTATGCACAACTGA............................................................. 23 1 1 40.00 40 40 0 0
..................................................................................................TGTGCAAATCAATGCAAAACTGA............................................................. 23 1 3 34.00 102 87 15 0
..................................................................................................TGTGCAAATCTATGCAAAA................................................................. 19 0 1 32.00 32 22 10 0
..................................................................................................TGCGCAAATCTATGCAAAACTGA............................................................. 23 1 1 24.00 24 16 8 0
...................................................................................................GTGCAAATCTATGCAAAACTG.............................................................. 21 0 1 23.00 23 23 0 0
..................................................................................................TGTGCAAATCGATGCAAAACTGA............................................................. 23 1 3 22.67 68 25 43 0
...................................................................................................GTGCAAATCTATGCAAAACTGAA............................................................ 23 1 1 22.00 22 17 5 0
...................................................................................................GTGCAAATCTATGCAAAACTGT............................................................. 22 1 1 22.00 22 22 0 0
..................................................................................................TGTGCAAATCTATGAAAAACTGA............................................................. 23 1 1 22.00 22 17 5 0
.................................................................................................ATGTGCAAATCTATGCAAAACTGAT............................................................ 25 1 1 21.00 21 17 4 0
..................................................................................................TGTGCAAATCTATGCAAAACTAA............................................................. 23 1 1 21.00 21 21 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATA........................................................... 25 1 1 21.00 21 20 1 0
..................................................................................................TGTGCAAATCTATGCAAAACTCA............................................................. 23 1 1 19.00 19 14 3 2
.................................................................................................ATGTGCAAATCTATGCAAAACTGAA............................................................ 25 2 1 19.00 19 12 7 0
..................................................................................................TGTGCAAATCTATGCAAAACTGTT............................................................ 24 1 1 18.00 18 18 0 0
..................................................................................................TGGGCAAATCTATGCAAAACTGA............................................................. 23 1 1 18.00 18 7 11 0
..................................................................................................TGTGCAAATCTATACAAAACTGA............................................................. 23 1 1 17.00 17 17 0 0
..............................................................TCGTTTTGCATAGTTGCACTAC.................................................................................................. 22 0 1 17.00 17 15 2 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAAT........................................................... 25 2 4 15.75 63 60 3 0
.................................................................................................ATGTGCAAATCTATGCAAAACTG.............................................................. 23 1 1 14.00 14 13 1 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAG............................................................ 24 1 1 12.00 12 12 0 0
..................................................................................................TGAGCAAATCTATGCAAAACTGA............................................................. 23 1 1 12.00 12 8 4 0
..................................................................................................TGTACAAATCTATGCAAAACTGA............................................................. 23 1 1 11.00 11 9 2 0
..................................................................................................TGTGCAAATCTATTCAAAACTGA............................................................. 23 1 1 11.00 11 7 4 0
................................................................................................ATTGTGCAAATCTATGCAAAACTG.............................................................. 24 1 1 11.00 11 9 2 0
..............................................................TCGTTTTGCATAGTTGCACTACA................................................................................................. 23 0 1 11.00 11 11 0 0
.................................................................................................TTGTGCAAATCTATGCAAAA................................................................. 20 0 1 11.00 11 7 4 0
.................................................................................................TTGTGCAAATCTATGCAAAAC................................................................ 21 0 1 11.00 11 9 2 0
.................................................................................................TTGTGCAAATCTATGCAACACTGA............................................................. 24 1 1 11.00 11 11 0 0
..................................................................................................TGTGCAAATCCATGCAAAACTGAAG........................................................... 25 2 3 10.67 32 25 7 0
..................................................................................................TGTGCAAATCTATCCAAAACTGA............................................................. 23 1 1 10.00 10 8 2 0
...................................................................................................GTGCAAATCTATGCAAAACT............................................................... 20 0 1 10.00 10 8 2 0
..................................................................................................TGTGCAAATCTATGCAAAACTGC............................................................. 23 1 1 9.00 9 8 1 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGC............................................................. 24 1 1 9.00 9 9 0 0
..................................................................................................TGTGCAAATCTATGTAAAACTGA............................................................. 23 1 1 9.00 9 2 7 0
..................................................................................................TGTGCAAATCTATGCAAAACTTA............................................................. 23 1 1 9.00 9 7 2 0
................................................................................................ATTGTGCAAATCTATGCAAAACTGA............................................................. 25 1 1 9.00 9 5 4 0
...................................................................................................GTGCAAATCTATGCAAAACTGC............................................................. 22 1 1 8.00 8 7 0 1
..................................................................................................TTTGCAAATCTATGCAAAACTGA............................................................. 23 1 1 8.00 8 1 7 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAAAA.......................................................... 26 3 2 8.00 16 1 15 0
..................................................................................................TGTGCAAATCTATGCAAACCTGAT............................................................ 24 1 1 8.00 8 8 0 0
..................................................................................................TGTGCAAATCTCTGAAAAACTGA............................................................. 23 2 1 8.00 8 8 0 0
.................................................................................................TTGTGCAACTCTATGCAAAACTGA............................................................. 24 1 1 8.00 8 8 0 0
..................................................................................................TCTGCAAATCTATGCAAAACTGA............................................................. 23 1 1 7.00 7 1 6 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAAA........................................................... 26 2 1 7.00 7 4 3 0
....................................................................................................TGCAAATCTATGCAAAACTGA............................................................. 21 0 1 7.00 7 2 5 0
..................................................................................................CGTGCAAATCTATGCAAAACTGA............................................................. 23 1 1 7.00 7 6 1 0
...................................................................................................GTGCAAATCTATGCCAAACTGA............................................................. 22 1 1 7.00 7 7 0 0
..................................................................................................TGTGCAAATCTTTGCAAAACTGA............................................................. 23 1 1 6.00 6 6 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGTA............................................................ 24 2 1 6.00 6 5 1 0
...................................................................................................GTGCAAATCTATGAAAAACTGA............................................................. 22 1 1 6.00 6 6 0 0
..................................................................................................TGTGCAACTCTATGCAAAACTGA............................................................. 23 1 1 6.00 6 5 1 0
................................................................................................AATGTGCAAATCTATGCAAAACTGA............................................................. 25 2 1 6.00 6 4 2 0
..................................................................................................TGTGCAAATCTATGCAAACCTG.............................................................. 22 1 1 6.00 6 6 0 0
..................................................................................................TGTGCAAATCAATGCAAAACTGAT............................................................ 24 1 2 5.00 10 9 1 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATTT.......................................................... 26 2 2 5.00 10 10 0 0
..................................................................................................TGTGCAAATATATGCAAAACTGA............................................................. 23 1 1 5.00 5 4 1 0
...............................................................................................AAATGTGCAAATCTATGCAAAACTGA............................................................. 26 2 1 5.00 5 5 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTCAT............................................................ 24 1 1 5.00 5 5 0 0
...................................................................................................GTGCAAATCTATGCAAAAC................................................................ 19 0 1 5.00 5 5 0 0
.........................................................................................................ATCTATGCAAAACTGA............................................................. 16 0 2 5.00 10 0 10 0
..................................................................................................TGTGCAAATCTATGGAAAACTGA............................................................. 23 1 1 5.00 5 1 4 0
..................................................................................................TGTGCAAATCTATGCACAACTGAT............................................................ 24 1 1 5.00 5 5 0 0
...............................................................................................TGATGTGCAAATCTATGCAAAAC................................................................ 23 2 2 5.00 10 7 3 0
..................................................................................................TGTGCGAATCTATGCAAAACTGA............................................................. 23 1 1 5.00 5 5 0 0
..................................................................................................TGTTCAAATCTATGCAAAACTGA............................................................. 23 1 1 5.00 5 3 2 0
..................................................................................................TATGCAAATCTATGCAAAACTGA............................................................. 23 1 1 5.00 5 4 1 0
..................................................................................................TGTGCAAATCTATGCAAACCTGAA............................................................ 24 2 1 5.00 5 5 0 0
..................................................................................................TGTCCAAATCTATGCAAAACTGA............................................................. 23 1 1 4.00 4 3 1 0
.................................................................................................TTGTGCAAATCTATGCAAA.................................................................. 19 0 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATGT.......................................................... 26 1 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATCTGTGCAAAACTGA............................................................. 23 1 1 4.00 4 4 0 0
.................................................................................................TTGTGCAAATCTAAGCAAAACTGA............................................................. 24 1 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGG............................................................. 23 1 1 4.00 4 4 0 0
................................................................................................TGTGTGCAAATCTATGCAAAAC................................................................ 22 2 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATTTATGCAAAACTGA............................................................. 23 1 1 4.00 4 3 1 0
..............................................................................................TGATTGTGCAAATCTATGCAAAAC................................................................ 24 2 1 4.00 4 4 0 0
.................................................................................................ATGTGCAAATCTATGCAAAAC................................................................ 21 1 1 4.00 4 1 3 0
..................................................................................................TGTGCAAATCTACGCAAAACTGA............................................................. 23 1 1 4.00 4 3 1 0
..................................................................................................TGTGCAAATCTATGCACAACT............................................................... 21 1 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTA.............................................................. 22 1 1 4.00 4 4 0 0
..................................................................................................TGTGCAAATCTCTGCAAAACTGAT............................................................ 24 1 1 4.00 4 4 0 0
...................................................................................................GTGCAAATCTATGCAAAACTGATT........................................................... 24 1 2 3.50 7 7 0 0
..................................................................................................TGTGCAAATCTATGCACAACGGA............................................................. 23 2 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCTATGCAAACCTGT............................................................. 23 2 1 3.00 3 3 0 0
..................................................................................................TGTGCAGATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................GGTGCAAATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 1 2 0
..................................................................................................TGTGCAAATCTATGCAACACTGA............................................................. 23 1 1 3.00 3 3 0 0
...................................................................................................GCGCAAATCTATGCAAAACTGA............................................................. 22 1 1 3.00 3 1 2 0
..................................................................................................TGTGAAAATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAACACTGT............................................................. 24 2 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGG............................................................. 24 1 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAC............................................................ 24 1 2 3.00 6 6 0 0
...................................................................................................GAGCAAATCTATGCAAAACTGA............................................................. 22 1 1 3.00 3 2 0 1
.................................................................................................TTGTGCAACTCTATGCAAAACTG.............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCTATGCACAACAGA............................................................. 23 2 1 3.00 3 3 0 0
..................................................................................................TGTGCACATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 2 1 0
.......................................................................................................AAATCTATGCAAAACTGA............................................................. 18 0 1 3.00 3 2 1 0
.................................................................................................TTGAGCAAATCTATGCAAAACTGA............................................................. 24 1 1 3.00 3 3 0 0
..............................................................TCGTTTTGCATAGTTGCACTACAA................................................................................................ 24 0 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAACACTG.............................................................. 23 1 1 3.00 3 3 0 0
.................................................................................................TTGCGCAAATCTATGCAAAACTGA............................................................. 24 1 1 3.00 3 3 0 0
.................................................................................................ATGTGCAAATCTATGCAAAACTGGT............................................................ 25 2 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGATT........................................................... 26 1 1 3.00 3 1 2 0
..................................................................................................TGTGCAAATCTATGCAAAACTAAT............................................................ 24 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAG............................................................ 25 1 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCTATGCATAACTGA............................................................. 23 1 1 3.00 3 3 0 0
...............................................................CGTTTTGCATAGTTGCACTACA................................................................................................. 22 0 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCAATGCAAAACTG.............................................................. 22 1 4 3.00 12 12 0 0
..................................................................................................TGTGCATATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATATATGCAAAACTGA............................................................. 24 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCCAAACTGA............................................................. 24 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTACGCAAAACTG.............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................TGTGCAAATCTATGCAAAACCGA............................................................. 23 1 1 3.00 3 2 1 0
..................................................................................................AGTGCAAATCTATGCAAAACTGA............................................................. 23 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCTATACAAAACTGA............................................................. 24 1 1 3.00 3 3 0 0
.................................................................................................TTGTGCAAATCCATGCAAAACTGA............................................................. 24 1 3 2.67 8 7 1 0
.................................................................................................ATGTGCAAATCTATGCAAAACTGT............................................................. 24 2 3 2.67 8 8 0 0
..................................................................................................TGTGCAAATCGATGCAAAACTGAT............................................................ 24 1 2 2.50 5 2 3 0
..................................................................................................TGTGCAAATCTATGCAAAACTGTTT........................................................... 25 2 2 2.50 5 5 0 0
.................................................................................................ATGTGCAAATCTATGCAAAACTGAAA........................................................... 26 3 2 2.50 5 1 4 0
..................................................................................................TGTGCAAATCAATGCAAAACTGAA............................................................ 24 2 4 2.25 9 8 1 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAAAA.......................................................... 27 3 1 2.00 2 0 2 0
..................................................................................................TGTGCAAATCTATGCAAAACTGAGA........................................................... 25 2 1 2.00 2 2 0 0
..................................................................................................TGCGCAAATCTATGCAAAACTGAT............................................................ 24 1 1 2.00 2 1 1 0
..................................................................................................TGTGCAAATCTATGCACAAC................................................................ 20 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTC.............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTATGCAAATCTATGCAAAACTG.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................AGTGCAAATCTATGCAAAACTG.............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAACTCTATGCAAAACTGAT............................................................ 24 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTC.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTACGCAAAACTGAT............................................................ 24 1 1 2.00 2 2 0 0
...................................................................................................GTCCAAATCTATGCAAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGCGCAAATCTATGCAAAACTGAA............................................................ 24 2 1 2.00 2 2 0 0
.................................................................................................TTGTGCACATCTATGCAAAACTGA............................................................. 24 1 1 2.00 2 1 1 0
..................................................................................................TGTGCAAATCTATGCAAACCT............................................................... 21 1 2 2.00 4 4 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTTAT............................................................ 24 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTACGCAAAACTGA............................................................. 24 1 1 2.00 2 2 0 0
..............................................................TCGTTTTGCATAGTTGCACTAT.................................................................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAACTCTATGCAAAACT............................................................... 22 1 1 2.00 2 2 0 0
..................................................................................................TGAGCAAATCTATGCAAAACTGAT............................................................ 24 1 1 2.00 2 1 1 0
..............................................................TCGTTTTGCATAGTTGCACT.................................................................................................... 20 0 1 2.00 2 2 0 0
..................................................................................................TGTGTAAATCTATGCAAAACTGA............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATAT.......................................................... 26 2 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGATG........................................................... 26 0 1 2.00 2 2 0 0
...................................................................................................GTGCAAATCTATGCAAAACTGAAA........................................................... 24 2 1 2.00 2 1 1 0
..................................................................................................TGTGCACATCTATGCAAACCTGA............................................................. 23 2 1 2.00 2 1 1 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGTT............................................................ 25 1 1 2.00 2 2 0 0
..................................................................................................TGGGCAAATCTATGCAAAACTGAT............................................................ 24 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTA.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAAA................................................................ 20 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTCTGCAAAACTGAA............................................................ 24 2 1 2.00 2 2 0 0
.................................................................................................ATGTGCAAATCTATGCAAAACT............................................................... 22 1 1 2.00 2 2 0 0
...................................................................................................GTACAAATCTATGCAAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
..............................................................TCGTTTTGCATAGTTGCACTAA.................................................................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCGATGCAAAACTGAA............................................................ 24 2 3 2.00 6 0 6 0
.................................................................................................TTGAGCAACTCTATGCAAAACTGA............................................................. 24 2 1 2.00 2 2 0 0
..................................................................................................TGTGCAAAACTATGCAAAACTGA............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAGAACTGA............................................................. 23 1 1 2.00 2 2 0 0
...................................................................................................GTGCAAATCTATGCAACACTGC............................................................. 22 2 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTT.............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACCG.............................................................. 23 1 1 2.00 2 2 0 0
................................................................................................AATGTGCAAATCTATGCAAAACTGAT............................................................ 26 2 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCGATGCAAAACTG.............................................................. 22 1 3 2.00 6 5 0 1
..................................................................................................TGCGCAAATCTATGCAAAACTG.............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTTTGCAAATCTATGCAAAACTGA............................................................. 24 1 1 2.00 2 1 0 1
..................................................................................................TGTACAAATCTATGCACAACTGA............................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTCAA............................................................ 24 2 1 2.00 2 2 0 0
..................................................................................................TATGCAAATCTATGCAAAACTGAA............................................................ 24 2 1 2.00 2 0 2 0
...................................................................................................GTGCAAATCTCTGCAAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTGGGCAAATCTATGCAAAACTGA............................................................. 24 1 1 2.00 2 2 0 0
................................................................................................ATTGTGCAAATCTATGCAAAACT............................................................... 23 1 1 2.00 2 1 1 0
........................................................................................................AATCTATGCAAAACTGA............................................................. 17 0 2 2.00 4 2 2 0
.................................................................................................TTATGCAAATCTATGCAAAACTGA............................................................. 24 1 1 2.00 2 1 1 0
..............................................................................................TCAATGTGCAAATCTATGCAAAACTGA............................................................. 27 3 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCCAAACTGA............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATGG.......................................................... 26 0 1 2.00 2 2 0 0
...................................................................................................GTGCAAATCTACGCAAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAAG........................................................... 26 1 1 2.00 2 0 2 0
..............................................................................................TAGTTGTGCAAATCTATGCAAAACTGA............................................................. 27 0 1 2.00 2 2 0 0
..................................................................................................TGTGCTAATCTATGCAAAACTGA............................................................. 23 1 1 2.00 2 2 0 0
...................................................................................................GTGCAAATCTATGTAAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATCCAAAACTGAT............................................................ 24 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAAGCTATGCAAAACTGA............................................................. 23 1 1 2.00 2 2 0 0
...................................................................................................GTGCAAATCTATGCAAAACTGTA............................................................ 23 2 2 2.00 4 4 0 0
...................................................................................................GTGCAAATCTATGCGAAACTGA............................................................. 22 1 1 2.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACCGA............................................................. 24 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCACAACTG.............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATCCAAAACTG.............................................................. 22 1 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCACAACTGT............................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................TGTGCAAATCTATGCACAACTGATT........................................................... 25 2 2 1.50 3 3 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTTT............................................................. 23 2 2 1.50 3 3 0 0
....................................................................................................TGCAAATCCATGCAAAACTGATG........................................................... 23 1 2 1.50 3 3 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGAAT........................................................... 26 2 2 1.50 3 3 0 0
..................................................................................................TGTGCAAATCTATCCAAATCTGA............................................................. 23 2 2 1.50 3 3 0 0
...............................................................................................AAATGTGCAAATCCATGCAAAACTGA............................................................. 26 3 3 1.33 4 4 0 0
.................................................................................................TTGTGCAAATCCATGCAAAAC................................................................ 21 1 4 1.25 5 5 0 0
..................................................................................................TGTGCAAATCAATGCAAAACT............................................................... 21 1 4 1.25 5 5 0 0
.................................................................................................TTGTGCAAATCTGTGCAAAACTGT............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGAAAAACTG.............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGTACAAATCTATGCAAAACTGAA............................................................ 24 2 1 1.00 1 1 0 0
...................................................................................................GTGCAAATCTCTGCAAAACTGCT............................................................ 23 2 1 1.00 1 1 0 0
.................................................................................................TTGGGCAAATCTATGCAAAACTG.............................................................. 23 1 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATATATGCAAAACTG.............................................................. 23 1 1 1.00 1 1 0 0
...............................................................CGTTTTGCATAGTTGCACTAT.................................................................................................. 21 1 1 1.00 1 1 0 0
..................................................................................................TCTGCAAATCTATGCAAAACTGAA............................................................ 24 2 1 1.00 1 0 1 0
..................................................................................................TGATCAAATCTATGCAAAACTGA............................................................. 23 2 1 1.00 1 0 1 0
...............................................................................................AAATGTGCAAATCCATGCAAAACTGAT............................................................ 27 3 2 1.00 2 2 0 0
....................................................................................................TGCAAATCTATGCAAAACTGATG........................................................... 23 0 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATTTTA........................................................ 28 3 2 1.00 2 2 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTTT............................................................. 24 2 1 1.00 1 1 0 0
...................................................................................................GGGCAAATCTATGCAAAACTGA............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................AGTGCACATCTATGCAAAACTGA............................................................. 23 2 1 1.00 1 0 1 0
.................................................................................................ATGTGCAAATCTATGCAAAACTGC............................................................. 24 2 1 1.00 1 1 0 0
..............................................................................................TAGTTGTGCAAATCTATGCAA................................................................... 21 0 1 1.00 1 1 0 0
..............................................................................................AAATTGTGCAAATCTATGCAAAACTGA............................................................. 27 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCCATGCAAAACTGATGGA......................................................... 27 2 2 1.00 2 0 2 0
...................................................................................................GTGCAAATCTATGCAAAACTGCT............................................................ 23 1 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATTCAAAACTGAAA........................................................... 26 3 1 1.00 1 0 1 0
...................................................................................................GTGCAAATCTATGCAACACTGA............................................................. 22 1 1 1.00 1 1 0 0
.................................................................................................ATGCGCAAATCTATGCAAAACTGAT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATCCAAACCTGA............................................................. 23 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTAAGCAAAACTGC............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAACCTATGCAAAACTGA............................................................. 23 1 1 1.00 1 0 1 0
..................................................................................................TGTTCAAATCTGTGCAAAACTGAT............................................................ 24 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGCAACACCG.............................................................. 23 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTACGCAAAACTGAA............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAGTCTATGCAAAACTGA............................................................. 23 1 1 1.00 1 1 0 0
................................................................................................ATTGGGCAAATCTATGCAAAACTGT............................................................. 25 3 1 1.00 1 1 0 0
..................................................................................................TGTGAAAATCTATGCACAACTCAT............................................................ 24 3 1 1.00 1 1 0 0
..................................................................................................TGAGCAAATCTCTGCAAAACTGA............................................................. 23 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGCGAAACCGA............................................................. 24 2 1 1.00 1 1 0 0
.................................................................................................ATGCGCAAATCTATGCAAAACTGA............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCAAGACTGA............................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................GAGCAAATCTATGCAAAACTGAA............................................................ 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATCCAAAACTGAA............................................................ 24 2 1 1.00 1 1 0 0
.......................................................................................................AAATCTATGCAAAACTGATTGTGC....................................................... 24 2 2 1.00 2 2 0 0
.................................................................................................TTGTTCAAATCTATGCAAAACTGA............................................................. 24 1 1 1.00 1 1 0 0
.....................................................................................................GCAAATCTATGCAACACTGA............................................................. 20 1 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAACCTATGCAAAACT............................................................... 22 1 1 1.00 1 0 1 0
.................................................................................................ATGGGCAAATCTATGCAAAACTGAT............................................................ 25 2 1 1.00 1 1 0 0
.................................................................................................ATGTGCAAATCTATGCCAAACTG.............................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................GTGCAAATCTATGCAAAACTGG............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCACAACTAATGG.......................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGTGGAAATCTATGCAAAACTGA............................................................. 23 1 1 1.00 1 0 1 0
..................................................................................................TGTGCAAATCTATGCAAAGCTGAA............................................................ 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAACTCTATGCAAAACTCA............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCCATGCAAAACTGAAGA.......................................................... 26 3 4 1.00 4 1 3 0
...............................................................................................AACTGTGCAAATCTATGCAAAACTGA............................................................. 26 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTGATTT.......................................................... 27 2 1 1.00 1 0 1 0
............................................................................................TCAAATTGTGCAAATCTATGCAAAACTGA............................................................. 29 3 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGAAAAACTGT............................................................. 24 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGCAAAACTAAA............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCGATGCAAAACTGAAA........................................................... 25 3 6 1.00 6 1 5 0
..................................................................................................TGTGCAAATCTATGCAGAACTG.............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGTGCACATCTATGCAAAACTGATT........................................................... 25 2 2 1.00 2 2 0 0
..................................................................................................TGTGTAAATCTATGCAAAACTGT............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCAAACCTCAT............................................................ 24 2 1 1.00 1 1 0 0
.....................................................................................................GCAAATCTATGCAAAACTG.............................................................. 19 0 1 1.00 1 0 1 0
................................................................................................ATTGTGCAAATCTATGCACAACTG.............................................................. 24 2 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTACGCAAAACTGAT............................................................ 25 1 1 1.00 1 1 0 0
...............................................................CGTTTTGCATAGTTGCACTA................................................................................................... 20 0 1 1.00 1 1 0 0
..................................................................................................TGTCCAAATCTATGCAAAAC................................................................ 20 1 1 1.00 1 1 0 0
..................................................................................................TTTGCAAATCTATGCAAAACTGAT............................................................ 24 1 1 1.00 1 0 1 0
..................................................................................................TGTGCAAATCTATGCAAACCTTAT............................................................ 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAAACTATGCAAAACTG.............................................................. 22 1 1 1.00 1 1 0 0
.................................................................................................TTGTGCAAATCTATGCAAAATTGA............................................................. 24 1 1 1.00 1 1 0 0
..................................................................................................TGTACAAATCTCTGCAAAACTGAT............................................................ 24 2 1 1.00 1 1 0 0
..............................................................TCGTTTTGCATAGTTGCACTACG................................................................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGTGCCAATCTATGCAAAACTGT............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAACTCTATGCAAAACTGT............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCAAAAATGA............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTAAGCAAAACTGA............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGTACAAATCTCTGCAAAACTGA............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCACAACTAAT............................................................ 24 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTCTGCAAAACTAA............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGTAAAAATGA............................................................. 23 2 1 1.00 1 0 1 0
...................................................................................................GTACAAATCTATGCAAAACTGAT............................................................ 23 1 1 1.00 1 1 0 0
..................................................................................................TGTGCAAATCTATGCAAAACTGATAA.......................................................... 26 2 1 1.00 1 1 0 0
.................................................................................................ATGCGCAACTCTATGCAAAACTGAT............................................................ 25 3 1 1.00 1 1 0 0
................................................................................................AATGTGCAAATCTATGCAAAACTG.............................................................. 24 2 1 1.00 1 1 0 0

Anti-sense strand reads

AGTAGGTTGGGCTCCGTTCGTTCGCACATCCCCAGAGTTATCAAGACAAACGTCGGGAGACAAGCAAAACGTATCAACGTGATGTTCTTCTTACATCAACACGTTTAGATACGTTTTGACTACCACCGGACGATAAATGAAGTTCACAACAACACCAAACAAAAATTTGATTAACACATAAA
**********************************************...((((.((.(((((.(((((((((((((((((((((.......))))...))))))..))))))))))).))))).)).))))....***********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM