ID:

rno-mir-199a

 Coordinate:

chr13:80125487-80125596 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.9 -39.9 -39.9
mature
star
  1. chr13:80125556-80125577 +
  2. chr3:11348248-11348269 +

Sense Strand Reads

CGGGAAGACAGGCTCTCCCCAGTCCCGGGACAGGATTTTCCACACACGGATGGAAGCTTCTGGAGATCCTGCTCCGTCGCCCCAGTGTTCAGACTACCTGTTCAGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTTAGACTGGGCAAGGGCCAGCAACGCCATGGACGGCTGGGGACAAAATGTGCTGTTTCCAAGGAGAGGACAG
*****************************************************************.((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).))))..****************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
................................................................................CCCAGTGTTCAGACTACCTGTTC........................................................................................................... 23 0 1 6632.00 6632 6562 38 32
.......................................................................................................................ACAGTAGTCTGCACATTGGTTA..................................................................... 22 0 2 3821.50 7643 7523 113 7
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAA.................................................................... 23 1 2 3294.50 6589 6519 69 1
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAT.................................................................... 23 1 2 2432.50 4865 4855 9 1
................................................................................CCCAGTGTTCAGACTACCTGTTCT.......................................................................................................... 24 1 1 2025.00 2025 2021 2 2
................................................................................CCCAGTGTTCAGACTACCTGTT............................................................................................................ 22 0 1 2013.00 2013 1940 35 38
.......................................................................................................................ACAGTAGTCTGCACATTGGTT...................................................................... 21 0 2 1681.00 3362 3230 98 34
................................................................................CCCAGTGTTCAGACTACCTGTTCA.......................................................................................................... 24 0 1 908.00 908 892 16 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAA................................................................... 24 1 1 735.00 735 728 7 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTA..................................................................... 23 0 2 655.00 1310 1305 5 0
................................................................................CCCAGTGTTCAGACTACCTGTTT........................................................................................................... 23 1 1 650.00 650 647 2 1
................................................................................CCCAGTGTTCAGACTACCTGTTA........................................................................................................... 23 1 1 537.00 537 536 1 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTT..................................................................... 23 1 2 490.00 980 967 13 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTT..................................................................... 22 1 2 440.00 880 865 9 6
......................................................................................................................TACAGTAGTCTGCACATTGGTTAT.................................................................... 24 1 2 430.00 860 860 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTT...................................................................... 22 0 2 372.50 745 727 15 3
........................................................................................................................CAGTAGTCTGCACATTGGTTA..................................................................... 21 0 2 305.50 611 597 14 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAA.................................................................... 24 1 2 257.50 515 513 2 0
.................................................................................CCAGTGTTCAGACTACCTGTTC........................................................................................................... 22 0 1 231.00 231 231 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAGA................................................................... 24 0 1 226.00 226 225 0 1
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAG.................................................................... 23 0 2 188.50 377 376 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTAA.......................................................................................................... 24 1 1 177.00 177 176 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTAT.......................................................................................................... 24 2 1 176.00 176 176 0 0
................................................................................CCCAGTGTTCAGACTACCTGT............................................................................................................. 21 0 1 152.00 152 150 0 2
........................................................................................................................CAGTAGTCTGCACATTGGTTAA.................................................................... 22 1 2 150.00 300 300 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAT................................................................... 24 2 2 145.00 290 282 8 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATA................................................................... 24 1 1 138.00 138 138 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATT................................................................... 24 2 2 131.00 262 255 7 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAT.................................................................... 22 1 2 128.00 256 255 1 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTT.................................................................... 23 2 2 127.00 254 254 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTT...................................................................... 20 0 2 106.50 213 203 7 3
.......................................................................................................................ACAGTAGTCTGCACATTGGT....................................................................... 20 0 2 106.00 212 204 1 7
......................................................................................................................TACAGTAGTCTGCACATTGGTTTT.................................................................... 24 2 2 94.00 188 187 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTTT.......................................................................................................... 24 2 1 79.00 79 79 0 0
.................................................................................CCAGTGTTCAGACTACCTGTT............................................................................................................ 21 0 1 78.00 78 78 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAAA................................................................... 23 1 1 76.00 76 76 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAA.................................................................. 25 2 1 71.00 71 71 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCAA......................................................................................................... 25 1 1 64.00 64 64 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTCT.......................................................................................................... 23 1 1 62.00 62 62 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAAA................................................................... 25 1 1 62.00 62 62 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTA.................................................................... 23 2 3 60.33 181 181 0 0
................................................................................CCCCGTGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 60.00 60 59 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTCTT......................................................................................................... 25 2 2 56.50 113 113 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTC..................................................................... 22 1 2 49.00 98 98 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAGT................................................................... 24 1 2 47.00 94 94 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTGA.................................................................... 23 2 2 44.00 88 86 2 0
.........................................................................................................................AGTAGTCTGCACATTGGTTA..................................................................... 20 0 2 41.50 83 82 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTCAT......................................................................................................... 25 1 1 40.00 40 40 0 0
...............................................................................ACCCAGTGTTCAGACTACCTGTTC........................................................................................................... 24 1 2 38.50 77 59 0 18
.......................................................................................................................ACAGTAGTCTGCACCTTGGTTA..................................................................... 22 1 2 38.00 76 75 1 0
.......................................................................................................................ACAGTAGTCTGCACCTTGGTTAA.................................................................... 23 2 2 37.50 75 73 2 0
................................................................................CCCAGTGTTCAGACTACCTGTTTA.......................................................................................................... 24 1 1 37.00 37 37 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTA.................................................................... 24 2 3 34.67 104 104 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTCA.................................................................... 23 2 2 34.00 68 66 2 0
......................................................................................................................TACAGTAGTCTGCACATTGGT....................................................................... 21 0 2 33.00 66 65 0 1
......................................................................................................................AACAGTAGTCTGCACATTGGTTA..................................................................... 23 1 2 33.00 66 66 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCTA......................................................................................................... 25 2 1 33.00 33 33 0 0
................................................................................CCCAGTGTTCAGAATACCTGTTC........................................................................................................... 23 1 1 32.00 32 31 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTCG.......................................................................................................... 24 1 1 32.00 32 31 1 0
................................................................................CCCAGTGTTCAGACTACCTGTTCTAT........................................................................................................ 26 3 1 32.00 32 32 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTAA................................................................... 25 2 2 31.50 63 63 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTAA..................................................................... 22 1 2 31.00 62 62 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTG..................................................................... 22 1 2 31.00 62 61 0 1
................................................................................CCCAGTGTTCAGACTACCTGTTG........................................................................................................... 23 1 1 30.00 30 30 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTTAA.................................................................... 21 1 2 29.50 59 59 0 0
.......................................................................................................................ACAGTAGTCTGCACCTTGGTTAT.................................................................... 23 2 2 29.50 59 58 1 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTA...................................................................... 21 1 2 29.00 58 56 0 2
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAT.................................................................. 25 2 1 29.00 29 29 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTCT.................................................................... 23 2 2 28.00 56 56 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTTA................................................................... 24 2 1 27.00 27 27 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTAA................................................................... 24 2 2 26.50 53 52 1 0
................................................................................CCCAGTGTTCCGACTACCTGTTC........................................................................................................... 23 1 1 26.00 26 26 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTT........................................................................................................... 22 1 1 25.00 25 24 0 1
.......................................................................................................................ACAGTAGTCTGCAAATTGGTTA..................................................................... 22 1 2 25.00 50 49 1 0
........................................................................................................................CAGTAGTCTGCACATTGGTTT..................................................................... 21 1 2 23.50 47 42 4 1
.................................................................................CCAGTGTTCAGACTACCTGTTA........................................................................................................... 22 1 1 23.00 23 23 0 0
................................................................................CCCAGTGTTCAGACTACCTGTCC........................................................................................................... 23 1 1 23.00 23 23 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTATT................................................................... 25 2 2 23.00 46 46 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTT...................................................................... 19 0 2 22.50 45 45 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATAT.................................................................. 25 2 1 21.00 21 21 0 0
..................................................................................CAGTGTTCAGACTACCTGTTC........................................................................................................... 21 0 1 21.00 21 21 0 0
................................................................................CCCCGTGTTCAGACTACCTGTTCT.......................................................................................................... 24 2 1 21.00 21 21 0 0
.......................................................................................................................ACAGTAGTCTGCACCTTGGTT...................................................................... 21 1 2 20.00 40 38 2 0
................................................................................CCCAGTGTTCAGACTACCTGTTAAA......................................................................................................... 25 2 1 20.00 20 20 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTAA..................................................................... 23 1 2 19.50 39 39 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATAA.................................................................. 25 2 1 19.00 19 19 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGG........................................................................ 19 0 2 19.00 38 37 0 1
................................................................................CCCAGTGTTCAGACTACCTG.............................................................................................................. 20 0 1 18.00 18 18 0 0
.......................................................................................................................ACAGTAGTCTGAACATTGGTTA..................................................................... 22 1 2 18.00 36 36 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTATA................................................................... 23 1 1 17.00 17 17 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTGT.................................................................... 23 2 2 17.00 34 34 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCAAA........................................................................................................ 26 2 1 17.00 17 17 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTTA................................................................... 25 2 1 17.00 17 17 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAAT................................................................... 25 2 2 16.50 33 33 0 0
................................................................................CCCAGTGTTCAGATTACCTGTTC........................................................................................................... 23 1 1 16.00 16 16 0 0
.......................................................................................................................ACAGTAGTCTGCAAATTGGTTAT.................................................................... 23 2 2 15.00 30 30 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTTAT......................................................................................................... 25 2 1 15.00 15 15 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTCA.......................................................................................................... 23 0 1 15.00 15 15 0 0
................................................................................CCCAGTGTTCAGACTACCTGTAC........................................................................................................... 23 1 1 15.00 15 15 0 0
.......................................................................................................................ACAGTAGTCTGCAAATTGGTTAA.................................................................... 23 2 3 15.00 45 44 1 0
......................................................................................................................AACAGTAGTCTGCACATTGGTT...................................................................... 22 1 2 14.50 29 27 1 1
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAG.................................................................. 25 2 1 14.00 14 14 0 0
................................................................................CCACGTGTTCAGACTACCTGTTC........................................................................................................... 23 2 1 14.00 14 13 1 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTATA................................................................... 25 1 1 14.00 14 14 0 0
.......................................................................................................................ACAGTAGTCTGCATATTGGTTA..................................................................... 22 1 3 13.67 41 31 10 0
.......................................................................................................................ACAGTAGTCTGAACATTGGTTAA.................................................................... 23 2 2 13.50 27 27 0 0
......................................................................................................................AACAGTAGTCTGCACATTGGTTAT.................................................................... 24 2 2 13.00 26 26 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTTAT.................................................................... 21 1 2 13.00 26 26 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTTAA......................................................................................................... 25 2 1 13.00 13 13 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCTTT........................................................................................................ 26 3 2 13.00 26 26 0 0
................................................................................CCCAGTGTTCAGAATACCTGTT............................................................................................................ 22 1 1 13.00 13 12 1 0
........................................................................................................................CAGTAGTCTGCACATTGGTTTT.................................................................... 22 2 3 12.67 38 34 4 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTAT................................................................... 24 3 5 12.60 63 63 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTATT................................................................... 23 2 2 12.50 25 25 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAAT................................................................... 23 2 2 12.50 25 25 0 0
.......................................................................................................................ACAGTAGTCTGAACATTGGTTAT.................................................................... 23 2 2 12.50 25 25 0 0
................................................................................CCCCGTGTTCAGACTACCTGTT............................................................................................................ 22 1 1 12.00 12 11 1 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAC.................................................................. 25 1 1 12.00 12 12 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAG.................................................................... 22 0 2 12.00 24 24 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTTAAAC.................................................................. 23 1 1 12.00 12 12 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTAG.......................................................................................................... 24 2 1 12.00 12 12 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTAA.......................................................................................................... 23 1 1 12.00 12 12 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTAT................................................................... 25 3 4 11.25 45 45 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCGA......................................................................................................... 25 2 1 11.00 11 11 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTAAA.................................................................. 25 3 2 11.00 22 22 0 0
................................................................................CCCAGTGTTCAGAATACCTGTTCT.......................................................................................................... 24 2 1 11.00 11 11 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAG.................................................................... 24 0 2 11.00 22 22 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAGA................................................................... 25 0 1 11.00 11 4 7 0
...............................................................................ACCCAGTGTTCAGACTACCTGTTCT.......................................................................................................... 25 2 2 10.50 21 21 0 0
..................................................................................CAGTGTTCAGACTACCTGTT............................................................................................................ 20 0 1 10.00 10 9 0 1
......................................................................................................................TACAGTAGTCTGCACATTGGTTAAAA.................................................................. 26 2 1 10.00 10 10 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCAG......................................................................................................... 25 0 1 10.00 10 10 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAAA................................................................. 26 3 1 10.00 10 10 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAC................................................................... 24 2 3 9.67 29 28 1 0
.......................................................................................................................CCAGTAGTCTGCACATTGGTTAA.................................................................... 23 2 2 9.50 19 19 0 0
.......................................................................................................................ACAGTAGTCTGCAAATTGGTT...................................................................... 21 1 2 9.50 19 15 4 0
..........................................................................................................................GTAGTCTGCACATTGGTTA..................................................................... 19 0 2 9.50 19 18 0 1
.......................................................................................................................ACAGTAGTCTGCACATTGGTTACA................................................................... 24 1 1 9.00 9 9 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTGT.......................................................................................................... 24 2 1 9.00 9 9 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCAAT........................................................................................................ 26 2 1 9.00 9 9 0 0
......................................................................................................................AACAGTAGTCTGCACATTGGTTAA.................................................................... 24 2 3 9.00 27 27 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTTAG.................................................................... 21 0 2 9.00 18 18 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTTAA.................................................................. 25 3 1 9.00 9 9 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTCAA................................................................... 24 2 1 9.00 9 9 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTAAAA........................................................................................................ 26 3 1 9.00 9 9 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTTT................................................................... 24 3 3 8.33 25 25 0 0
................................................................................CCCAGTGTTCCGACTACCTGTT............................................................................................................ 22 1 1 8.00 8 8 0 0
................................................................................CCGCGTGTTCAGACTACCTGTTC........................................................................................................... 23 2 1 8.00 8 8 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTAT..................................................................... 23 2 4 8.00 32 32 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTTA.......................................................................................................... 23 1 1 8.00 8 8 0 0
................................................................................CCCCGTGTTCAGACTACCTGTTA........................................................................................................... 23 2 1 8.00 8 8 0 0
...................................................................................AGTGTTCAGACTACCTGTTC........................................................................................................... 20 0 1 8.00 8 8 0 0
.......................................................................................................................ACAGTAGTCTGCAAATTGGTTAAA................................................................... 24 2 1 8.00 8 8 0 0
................................................................................CCCAGTGTTCCGACTACCTGTTCT.......................................................................................................... 24 2 1 8.00 8 8 0 0
..................................................................................CAGTGTTCAGACTACCTGTTCT.......................................................................................................... 22 1 1 8.00 8 8 0 0
................................................................................CCCAGTGTTCAGACTACCTGTAA........................................................................................................... 23 2 1 8.00 8 8 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCTAA........................................................................................................ 26 3 2 7.50 15 15 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTGA.......................................................................................................... 24 1 1 7.00 7 7 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAAAA.................................................................. 24 2 1 7.00 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTCGT......................................................................................................... 25 2 1 7.00 7 7 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAGA................................................................... 23 0 1 7.00 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTA............................................................................................................ 22 1 1 7.00 7 7 0 0
................................................................................CCCAGTGTTCGGACTACCTGTTC........................................................................................................... 23 1 1 7.00 7 7 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTA...................................................................... 22 1 2 7.00 14 14 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTTA.................................................................... 22 2 3 7.00 21 21 0 0
................................................................................CCCAGTGTTCAGACTAACTGTTC........................................................................................................... 23 1 1 7.00 7 7 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTTT................................................................... 25 3 3 7.00 21 21 0 0
.......................................................................................................................ACAGTAGTCTCCACATTGGTTA..................................................................... 22 1 2 7.00 14 14 0 0
.......................................................................................................................ACAGTAGTCTGCACCTTGGTTAAA................................................................... 24 2 1 7.00 7 7 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTATAA.................................................................. 24 2 1 7.00 7 7 0 0
.......................................................................................................................ACAGTAGTCTACACATTGGTTA..................................................................... 22 1 2 7.00 14 13 1 0
................................................................................CCTCGTGTTCAGACTACCTGTTC........................................................................................................... 23 2 1 7.00 7 7 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTTTAA.................................................................. 26 3 1 7.00 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTAGA......................................................................................................... 25 3 1 7.00 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTC............................................................................................................ 22 1 1 7.00 7 6 1 0
.......................................................................................................................ACCGTAGTCTGCACATTGGTTAA.................................................................... 23 2 2 6.50 13 13 0 0
.......................................................................................................................ACAGTAGTCTCCACATTGGTTAT.................................................................... 23 2 2 6.50 13 13 0 0
.....................................................................................................................ATACAGTAGTCTGCACATTGGTTA..................................................................... 24 1 2 6.50 13 13 0 0
.....................................................................................................................ATACAGTAGTCTGCACATTGGTTT..................................................................... 24 2 2 6.50 13 13 0 0
.......................................................................................................................ACAGTAGTCTGTACATTGGTTA..................................................................... 22 1 2 6.50 13 13 0 0
................................................................................CCCAGTGTTCAGACAACCTGTTC........................................................................................................... 23 1 1 6.00 6 6 0 0
......................................................................................................................AACAGTAGTCTGCACATTGGTTAG.................................................................... 24 1 2 6.00 12 6 6 0
................................................................................CCCAGTGCTCAGACTACCTGTTC........................................................................................................... 23 1 1 6.00 6 6 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTGA................................................................... 24 1 1 6.00 6 6 0 0
................................................................................CCCAGTGTTCAGATTACCTGTT............................................................................................................ 22 1 1 6.00 6 6 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAGAA.................................................................. 25 1 1 6.00 6 6 0 0
........................................................................................................................CAGTAGTCTGCACATTGGT....................................................................... 19 0 2 6.00 12 12 0 0
................................................................................CCCAGCGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 6.00 6 6 0 0
................................................................................CCCAGTGTTCAAACTACCTGTTC........................................................................................................... 23 1 1 6.00 6 5 1 0
................................................................................CCCAGTGTTCCGACTACCTGTTT........................................................................................................... 23 2 1 6.00 6 6 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTG..................................................................... 23 1 2 6.00 12 12 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTTTA................................................................... 23 2 2 6.00 12 12 0 0
................................................................................CCCTGTGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 6.00 6 6 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAAAT.................................................................. 26 2 1 6.00 6 6 0 0
................................................................................CCCAGTGTTCGGACTACCTGTT............................................................................................................ 22 1 1 6.00 6 6 0 0
.......................................................................................................................ACAGTAGTCTCCACATTGGTT...................................................................... 21 1 2 6.00 12 11 1 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTGA.................................................................... 24 2 2 6.00 12 12 0 0
................................................................................CCCAGTGTTCAGACTACCT............................................................................................................... 19 0 1 6.00 6 6 0 0
................................................................................ACCCGTGTTCAGACTACCTGTTC........................................................................................................... 23 2 1 6.00 6 6 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATTT.................................................................. 25 3 3 5.67 17 17 0 0
.......................................................................................................................ACAGTAGTATGCACATTGGTTAT.................................................................... 23 2 2 5.50 11 11 0 0
.......................................................................................................................ACCGTAGTCTGCACATTGGTTA..................................................................... 22 1 2 5.50 11 11 0 0
.....................................................................................................................ATACAGTAGTCTGCACATTGGTT...................................................................... 23 1 2 5.50 11 11 0 0
.......................................................................................................................ACAATAGTCTGCACATTGGTTA..................................................................... 22 1 2 5.50 11 9 2 0
........................................................................................................................CAGTAGACTGCACATTGGTTA..................................................................... 21 1 3 5.33 16 16 0 0
...............................................................................ACCCAGTGTTCAGACTACCTGTTT........................................................................................................... 24 2 2 5.00 10 10 0 0
................................................................................CCTAGTGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................................CCCAGCGTTCAGACTACCTGTT............................................................................................................ 22 1 1 5.00 5 5 0 0
...............................................................................TCCCAGTGTTCAGACTACCTGTTC........................................................................................................... 24 1 1 5.00 5 5 0 0
................................................................................CCCTGTGTTCAGACTACCTGTT............................................................................................................ 22 1 1 5.00 5 5 0 0
................................................................................ACCAGTGTTCAGACTACCTGTTCGGA........................................................................................................ 26 3 1 5.00 5 5 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTG.................................................................... 23 1 2 5.00 10 10 0 0
................................................................................CCCAGTGTTCAGACTACCTTTT............................................................................................................ 22 1 1 5.00 5 0 5 0
................................................................................CCCAGAGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 5.00 5 5 0 0
......................................................................................................................TACCGTAGTCTGCACATTGGTTAT.................................................................... 24 2 2 5.00 10 10 0 0
................................................................................CCCCGTGTTCAGACTACCTGTTCA.......................................................................................................... 24 1 1 5.00 5 5 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTATAT.................................................................. 26 2 1 5.00 5 5 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTAAT......................................................................................................... 25 2 1 5.00 5 5 0 0
........................................................................................................................CAGTAGTCTGCGCATTGGTTA..................................................................... 21 1 2 5.00 10 1 9 0
................................................................................CCCAGTGTTCAGAGTACCTGTTC........................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................................CCCAGTGTTCAGACTACATGTTC........................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................................CCCAGTGTTCAGACAACCTGTT............................................................................................................ 22 1 1 5.00 5 5 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTCC.......................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................................CCCAGTGTTCAAACTACCTGTT............................................................................................................ 22 1 1 5.00 5 4 1 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAAAAT................................................................. 26 2 1 5.00 5 5 0 0
.......................................................................................................................CCAGTAGTCTGCACATTGGTTA..................................................................... 22 1 2 4.50 9 9 0 0
.......................................................................................................................TCAGTAGTCTGCACATTGGTTA..................................................................... 22 1 2 4.50 9 8 1 0
.......................................................................................................................ACCGTAGTCTGCACATTGGTTAT.................................................................... 23 2 2 4.50 9 9 0 0
.......................................................................................................................ACGGTAGTCTGCACATTGGTTA..................................................................... 22 1 2 4.50 9 9 0 0
.......................................................................................................................ACAGTAGTCTGTACATTGGTTAT.................................................................... 23 2 2 4.50 9 9 0 0
.......................................................................................................................TCAGTAGTCTGCACATTGGTTAA.................................................................... 23 2 2 4.50 9 9 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTAAT.................................................................... 24 2 2 4.50 9 9 0 0
......................................................................................................................TACAGTAGTCTGCCCATTGGTTA..................................................................... 23 1 2 4.50 9 9 0 0
......................................................................................................................TACCGTAGTCTGCACATTGGTTA..................................................................... 23 1 2 4.50 9 9 0 0
......................................................................................................................TACCGTAGTCTGCACATTGGTTT..................................................................... 23 2 2 4.50 9 9 0 0
......................................................................................................................TACAGTAGTCTGCCCATTGGTTAT.................................................................... 24 2 2 4.50 9 9 0 0
...........................................................................................................................TAGTCTGCACATTGGTTA..................................................................... 18 0 2 4.50 9 8 1 0
.......................................................................................................................ACAGTAGGCTGCACATTGGTTA..................................................................... 22 1 2 4.50 9 9 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAGT................................................................... 25 1 2 4.50 9 9 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTGT.................................................................... 24 2 2 4.50 9 9 0 0
.......................................................................................................................ACAGTAGTCTGCACTTTGGTTAT.................................................................... 23 2 2 4.00 8 8 0 0
......................................................................................................................AACAGTAGTCTGCACATTGGTTAGA................................................................... 25 1 1 4.00 4 4 0 0
................................................................................CCCAGTGCTCAGACTACCTGTTCT.......................................................................................................... 24 2 1 4.00 4 4 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATC................................................................... 24 2 2 4.00 8 8 0 0
.......................................................................................................................ACAGTAGCCTGCACATTGGTTAA.................................................................... 23 2 2 4.00 8 8 0 0
................................................................................CCCAGTGTTCAGACTACTTGTTC........................................................................................................... 23 1 1 4.00 4 4 0 0
.......................................................................................................................ACAGTAGTCTGCATATTGGTTAT.................................................................... 23 2 4 4.00 16 16 0 0
.................................................................................CCAGTGTTCAGACTACCTGT............................................................................................................. 20 0 1 4.00 4 4 0 0
......................................................................................................................TACAGTAGTCTGCCCATTGGTT...................................................................... 22 1 2 4.00 8 8 0 0
.......................................................................................................................ACAGTAGTCTGCACCTTGGTTATA................................................................... 24 2 1 4.00 4 4 0 0
................................................................................CCAAGTGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 4.00 4 3 1 0
.......................................................................................................................ACGGTAGTCTGCACATTGGTTAA.................................................................... 23 2 2 4.00 8 8 0 0
................................................................................CCCAGTGTCCAGACTACCTGTTC........................................................................................................... 23 1 1 4.00 4 4 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTAAAAT................................................................. 27 2 1 4.00 4 4 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTCAT......................................................................................................... 24 1 1 4.00 4 4 0 0
.......................................................................................................................ACAGTAGTCTGAACATTGGTT...................................................................... 21 1 2 4.00 8 8 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTATAT.................................................................. 24 2 1 4.00 4 4 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAGAAT................................................................. 26 1 1 4.00 4 4 0 0
................................................................................CCCAGTGTTCAGAATACCTGTTCA.......................................................................................................... 24 1 1 4.00 4 4 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTCG.......................................................................................................... 23 1 1 4.00 4 0 4 0
................................................................................CCCAGTGTTCAGACTACCAGTTCT.......................................................................................................... 24 2 1 4.00 4 4 0 0
.................................................................................CCAGTGTTCAGACTACCTGTTTT.......................................................................................................... 23 2 2 4.00 8 8 0 0
.......................................................................................................................ACAGTAGCCTGCACATTGGTT...................................................................... 21 1 2 4.00 8 6 1 1
................................................................................CCCAGTGTTCAGACTACCTGTTAGT......................................................................................................... 25 3 1 4.00 4 4 0 0
.......................................................................................................................ACAGTAGTATGCACATTGGTTA..................................................................... 22 1 2 4.00 8 7 1 0
................................................................................CCCAGTGTCCAGACTACCTGTTCT.......................................................................................................... 24 2 1 4.00 4 4 0 0
.........................................................................................................................AGTAGTCTGCACATTGGTTAAA................................................................... 22 1 1 4.00 4 4 0 0
...............................................................................ACCCAGTGTTCAGACTACCTGTTA........................................................................................................... 24 2 2 4.00 8 8 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTAC.................................................................... 23 1 2 3.50 7 7 0 0
.......................................................................................................................ACAGCAGTCTGCACATTGGTTA..................................................................... 22 1 2 3.50 7 7 0 0
.......................................................................................................................ACAGTAGTCTGCACATAGGTTAA.................................................................... 23 2 2 3.50 7 7 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTCG.................................................................... 23 1 2 3.50 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTCCT.......................................................................................................... 24 2 2 3.50 7 7 0 0
.......................................................................................................................ACAGTAGTCTACACATTGGTTAA.................................................................... 23 2 2 3.50 7 7 0 0
.......................................................................................................................ACCGTAGTCTGCACATTGGTT...................................................................... 21 1 2 3.50 7 7 0 0
..........................................................................................................................GTAGTCTGCACATTGGTTAT.................................................................... 20 1 2 3.50 7 7 0 0
......................................................................................................................TACAGTAGTCTGCACATTGGTTC..................................................................... 23 1 2 3.50 7 7 0 0
................................................................................CCCAGTGTTCAGACTACCTGTTTTT......................................................................................................... 25 3 2 3.50 7 7 0 0
.......................................................................................................................ACACTAGTCTGCACATTGGTTA..................................................................... 22 1 2 3.50 7 6 1 0
.......................................................................................................................ACAGTAGACTGCACATTGGTTA..................................................................... 22 1 2 3.50 7 7 0 0
......................................................................................................................TACAGTAGTCTGCCCATTGGTTT..................................................................... 23 2 2 3.50 7 6 1 0
........................................................................................................................CAGTAGTCTGCACCTTGGTTA..................................................................... 21 1 2 3.50 7 7 0 0
.......................................................................................................................ACAGTAGTCTGGACATTGGTTA..................................................................... 22 1 2 3.50 7 6 1 0
.........................................................................................................................AGTAGTCTGCACATTGGTTT..................................................................... 20 1 2 3.50 7 7 0 0
.......................................................................................................................ACAGGAGTCTGCACATTGGTTAT.................................................................... 23 2 2 3.50 7 7 0 0
.......................................................................................................................ACAGTAGTCTGGACATTGGTTAA.................................................................... 23 2 3 3.33 10 10 0 0
.......................................................................................................................ACAGTAGTCTCCACATTGGTTAA.................................................................... 23 2 3 3.33 10 10 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTAT..................................................................... 22 2 4 3.25 13 13 0 0
................................................................................CCCAGTGTTCAGACTACCTTTTC........................................................................................................... 23 1 1 3.00 3 3 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTATATT................................................................. 26 2 1 3.00 3 3 0 0
.......................................................................................................................CCAGTAGTCTGCACATTGGTTAT.................................................................... 23 2 2 3.00 6 6 0 0
.......................................................................................................................TCAGTAGTCTGCACATTGGTTATA................................................................... 24 2 1 3.00 3 3 0 0
.......................................................................................................................ACAGTAGTCTGCACATTGGTTTGT................................................................... 24 2 2 3.00 6 6 0 0
.......................................................................................................................ACAGTAGTCTGCAAATTGGTTAGA................................................................... 24 1 1 3.00 3 3 0 0
................................................................................CCCAGGGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 3.00 3 3 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAC.................................................................... 22 1 2 3.00 6 6 0 0
........................................................................................................................CAGTAGTCTGCACATTGGTTAAAT.................................................................. 24 2 1 3.00 3 3 0 0
.....................................................................................................................AAACAGTAGTCTGCACATTGGTT...................................................................... 23 2 2 3.00 6 6 0 0
................................................................................CCCGGTGTTCAGACTACCTGTTC........................................................................................................... 23 1 1 3.00 3 3 0 0
................................................................................CCCAGTGTTCAGACTGCCTGTTC........................................................................................................... 23 1 1 3.00 3 3 0 0
.......................................................................................................................ACAGTAGTCTTCACATTGGTTA..................................................................... 22 1 2 3.00 6 6 0 0

Anti-sense strand reads

GCCCTTCTGTCCGAGAGGGGTCAGGGCCCTGTCCTAAAAGGTGTGTGCCTACCTTCGAAGACCTCTAGGACGAGGCAGCGGGGTCACAAGTCTGATGGACAAGTCCTGTTACGGCAACATGTCATCAGACGTGTAACCAATCTGACCCGTTCCCGGTCGTTGCGGTACCTGCCGACCCCTGTTTTACACGACAAAGGTTCCTCTCCTGTC
******************************************************.((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).))))..***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:35 PM