ID:

rno-mir-1949

Coordinate:

chr18:28353149-28353245 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.1 -38.0 -37.9
mature
  1. chr18:28353212-28353236 +
  2. chr2:2478683-2478707 -
  3. chr3:142141787-142141811 +
star

Sense Strand Reads

TGTAGGCAGCTACCTAGGTTTCCTTGTACCTAGGCAAGTGTTACACGGCTGGGAGAAAAGCAGCCAATAGCTGGTTGGCATTCTGGGCCTGGTTCATGCCAACTCTGTTGTTAACTATACCAGGATGTCAGCATAGTTGCTTACCCATGAAGAGTAAGTTCTGCAGGAAGAAACCTAAACTCCTACATGGAGGTTAG
***********************************...........(((((.........)))))..(((((((((((((((((((...(((((.....((((...))))..)))))..))))))))))))).))))))(((((.........)))))....***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528817
Adult_testes
.................................................................................................................ACTATACCAGGATGTCAGCATAGTT........................................................... 25 0 3 0.33 1 1
...................................................................TAGCTGGTTAGCACTCTGG............................................................................................................... 19 2 20 0.05 1 1

Anti-sense strand reads

ACATCCGTCGATGGATCCAAAGGAACATGGATCCGTTCACAATGTGCCGACCCTCTTTTCGTCGGTTATCGACCAACCGTAAGACCCGGACCAAGTACGGTTGAGACAACAATTGATATGGTCCTACAGTCGTATCAACGAATGGGTACTTCTCATTCAAGACGTCCTTCTTTGGATTTGAGGATGTACCTCCAATC
***********************************...........(((((.........)))))..(((((((((((((((((((...(((((.....((((...))))..)))))..))))))))))))).))))))(((((.........)))))....***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:39 PM