ID:

rno-mir-190a-2

 Coordinate:

chr8:80928165-80928249 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-30.6 -30.3 -30.3
mature
  1. chr8:73030095-73030117 -
  2. chr8:80928179-80928201 +
star
  1. chr8:73030060-73030081 -
  2. chr8:80928215-80928236 +

Sense Strand Reads

CTTCGGTACTGTAACTATTCTCAAGCTCACTCAAACCTGGATGCCTTTTCTGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAGCATATTCCTACAGTGTCTTGCCCTGTCTCCGGGGGTCCTAACAAAGTTTAGAAGGCAACAAGAAAGAATATG
*************************************************..(((((...(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..)))))...)))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
................................................................TGATATGTTTGATATATTAGGTT.................................................................................................. 23 0 2 568.50 1137 1112 5 20
................................................................TGATATGTTTGATATATTAGGTTG................................................................................................. 24 0 2 202.50 405 344 12 49
................................................................TGATATGTTTGATATATTAGGTCG................................................................................................. 24 1 2 147.50 295 1 294 0
................................................................TGATATGTTTGATATATTAGGTTT................................................................................................. 24 1 2 109.50 219 216 3 0
................................................................TGATATGTTTGATATATTAGGT................................................................................................... 22 0 2 94.00 188 181 0 7
................................................................TGATATGTTTGATATATTAGGTTA................................................................................................. 24 1 2 91.00 182 182 0 0
................................................................TGATATGTTTGATATATTAGGTTCG................................................................................................ 25 2 2 75.50 151 0 151 0
................................................................TGATATGTTTGATATATTAGGTTGT................................................................................................ 25 0 2 66.00 132 132 0 0
................................................................TGATATGTTTGATATATTAGGTA.................................................................................................. 23 1 2 41.50 83 83 0 0
....................................................................................................ACTATATATCAAGCATATTCCT............................................................... 22 0 2 38.50 77 77 0 0
................................................................TGATATGTTTGATATATTAGGTAA................................................................................................. 24 2 2 35.00 70 70 0 0
................................................................TGATATGTTTGATATATTAGGTTGA................................................................................................ 25 1 2 20.00 40 37 0 3
................................................................TGATATGTTTGATATATTAGG.................................................................................................... 21 0 2 14.50 29 27 0 2
....................................................................................................ACTATATATCAAGCATATTCCTA.............................................................. 23 0 2 13.00 26 26 0 0
................................................................TGATATGTTTGATATATTAGGTTAA................................................................................................ 25 2 2 11.50 23 23 0 0
.................................................................GATATGTTTGATATATTAGGTT.................................................................................................. 22 0 2 10.00 20 20 0 0
.................................................................GATATGTTTGATATATTAGGTCG................................................................................................. 23 1 2 5.00 10 0 10 0
................................................................TGATATGTTTGATATATTAGGA................................................................................................... 22 1 3 5.00 15 13 0 2
................................................................TGATATGTTTGATCTATTAGGTT.................................................................................................. 23 1 2 4.50 9 9 0 0
................................................................TGATATGTTTGATATATTAGGTAT................................................................................................. 24 2 2 4.50 9 9 0 0
...............................................................ATGATATGTTTGATATATTAGGTT.................................................................................................. 24 1 2 4.00 8 8 0 0
................................................................TGATATGTTTGATATATTAGGCT.................................................................................................. 23 1 2 4.00 8 8 0 0
................................................................TGATATGTTTGATATATTAGGTG.................................................................................................. 23 1 2 3.50 7 7 0 0
................................................................TGATATGTTTGAGATATTAGGTCG................................................................................................. 24 2 2 3.50 7 0 7 0
....................................................................................................ACTATATATCAAGCATATTCCTAT............................................................. 24 1 2 3.50 7 7 0 0
................................................................TGATATGTTTGATATATTAGGTTAT................................................................................................ 25 1 2 3.50 7 7 0 0
................................................................TGATATGTTTGATATATTCGGTT.................................................................................................. 23 1 2 3.50 7 7 0 0
................................................................TGATATGTTTGATATATTAGGTTTT................................................................................................ 25 1 2 3.50 7 7 0 0
................................................................TGATATGTTTGCTATATTAGGTT.................................................................................................. 23 1 2 3.00 6 6 0 0
....................................................................................................ACTATATATCAAGCATATTCC................................................................ 21 0 2 3.00 6 6 0 0
................................................................TGATATGTTTGATCTATTAGGTTCG................................................................................................ 25 3 2 2.50 5 0 5 0
.................................................................GATATGTTTGATATATTAGGTTA................................................................................................. 23 1 2 2.50 5 5 0 0
................................................................TGATATGTTTGATATATTAGGTTTCG............................................................................................... 26 3 2 2.50 5 0 5 0
.....................................................................................................CTATATATCAAGCATATTCCT............................................................... 21 0 2 2.50 5 5 0 0
................................................................TGCTATGTTTGATCTATTAGGTCG................................................................................................. 24 3 2 2.50 5 0 5 0
................................................................TGATATGTTTGATATATTAGGACG................................................................................................. 24 2 2 2.00 4 0 4 0
................................................................TGATATGTTTGATTTATTAGGTCG................................................................................................. 24 2 2 2.00 4 0 4 0
................................................................TGATATGTTTGATCTATTAGGTTGT................................................................................................ 25 1 2 2.00 4 4 0 0
................................................................TGATATGTTTGATATATTAGGAT.................................................................................................. 23 1 2 2.00 4 3 1 0
................................................................TGATATGTTTGATCTATTAGGTCG................................................................................................. 24 2 2 2.00 4 0 4 0
................................................................TGATATGTTTGATATATTAGGTTGCG............................................................................................... 26 2 2 2.00 4 0 4 0
................................................................TGATATGTTTGCTATATTAGGTCG................................................................................................. 24 2 2 2.00 4 0 4 0
...............................................................TTGATATGTTTGATATATTAGGT................................................................................................... 23 1 2 2.00 4 4 0 0
.................................................................GATATGTTTGATATATTAGGTTG................................................................................................. 23 0 2 2.00 4 1 0 3
................................................................TGATATGTTTGATATATTAG..................................................................................................... 20 0 2 2.00 4 3 0 1
.....................................................................................................CTATATATCAAGCATATTCCTAT............................................................. 23 1 2 2.00 4 4 0 0
................................................................TGATATGTTTGATATATTAGGTTTA................................................................................................ 25 2 3 1.67 5 5 0 0
................................................................TGATATGTTTGATTTATTAGGTT.................................................................................................. 23 1 2 1.50 3 3 0 0
.................................................................GATATGTTTGATATATTAGGTTT................................................................................................. 23 1 2 1.50 3 3 0 0
................................................................TGATATGTTTGCTATATTAGGTTA................................................................................................. 24 2 2 1.50 3 3 0 0
...................................................................................................AACTATATATCAAGCATATTCCT............................................................... 23 0 2 1.50 3 3 0 0
....................................................................................................ACTATATATCAAGCATATTC................................................................. 20 0 2 1.50 3 3 0 0
................................................................TGATCTGTTTGATATATTAGGTCG................................................................................................. 24 2 2 1.50 3 0 3 0
...................................................................................................AACTATATATCAAGCATATTCCTA.............................................................. 24 0 2 1.50 3 3 0 0
................................................................TGATATGTTTGATATATTCGGTTCG................................................................................................ 25 3 2 1.50 3 0 3 0
....................................................................................................ACTATATATCAAGCATATTCGT............................................................... 22 1 2 1.50 3 3 0 0
................................................................TGATATGTTTGATATATTAGGTTGC................................................................................................ 25 1 2 1.50 3 3 0 0
................................................................TGATATGTTTGATATATTAGGTTAG................................................................................................ 25 2 2 1.50 3 3 0 0
................................................................TGATATGTTTGATCTATTAGGTTG................................................................................................. 24 1 2 1.50 3 3 0 0
................................................................TGATATGTTTGCTATATTAGGTTGA................................................................................................ 25 2 3 1.33 4 4 0 0
................................................................TGATATGTTTGATATATTAGGTAC................................................................................................. 24 2 3 1.33 4 4 0 0
................................................................TGATATGTTTGGTATATTAGGTT.................................................................................................. 23 1 2 1.00 2 2 0 0
................................................................TGATATGTTCGATATATTAGGTT.................................................................................................. 23 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTA...................................................................................................... 19 0 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTTAAA............................................................................................... 26 3 3 1.00 3 3 0 0
................................................................TGATATGTTTGATGTATTAGGTT.................................................................................................. 23 1 2 1.00 2 2 0 0
.....................................................................................................CTATATATCAAGCATATTCCTAAA............................................................ 24 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTAGA................................................................................................ 25 2 2 1.00 2 2 0 0
.................................................................GATATGTTTGATATATTAGGTA.................................................................................................. 22 1 2 1.00 2 2 0 0
...............................................................ATGATATGTTTGATATATTAGGTTTT................................................................................................ 26 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGCTATATTAGGTTT................................................................................................. 24 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGATGTATTAGGTCG................................................................................................. 24 2 2 1.00 2 0 2 0
................................................................TGCTATGTTTGATCTATTAGGTT.................................................................................................. 23 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGATCTATTAGGT................................................................................................... 22 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGCTATATTAGGTTG................................................................................................. 24 1 2 1.00 2 2 0 0
...............................................................ATGATATGTTTGATATATTAGGTTG................................................................................................. 25 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGCCG................................................................................................. 24 2 2 1.00 2 0 2 0
................................................................TGATATGTTTGATCTATTAGGTTT................................................................................................. 24 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGT.................................................................................................... 21 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTTGCA............................................................................................... 26 2 2 1.00 2 2 0 0
.................................................................GATATGTTTGATATATTAGGT................................................................................................... 21 0 2 1.00 2 2 0 0
................................................................TGATCTGTTTGATATATTAGGTT.................................................................................................. 23 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTCGGTTG................................................................................................. 24 1 2 1.00 2 2 0 0
................................................................TGATATGTTTCATATATTAGGTTCG................................................................................................ 25 3 2 1.00 2 0 2 0
................................................................TGATTTGTTTGATATATTAGGTT.................................................................................................. 23 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTTGTT............................................................................................... 26 0 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGC................................................................................................... 22 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTCGGTTT................................................................................................. 24 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTGA................................................................................................. 24 2 2 1.00 2 2 0 0
................................................................CGATATGTTTGATATATTAGGTTG................................................................................................. 24 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTTTAT............................................................................................... 26 2 2 1.00 2 2 0 0
..............................................................AATGATATGTTTGATATATTAGGTTGT................................................................................................ 27 2 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGCTG................................................................................................. 24 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTCGGTA.................................................................................................. 23 2 2 1.00 2 2 0 0
.................................................................GATATGTTTGATATATTAGGTTGT................................................................................................ 24 0 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGGT.................................................................................................. 23 1 2 1.00 2 2 0 0
................................................................TGATATGTTTGATATATTAGGATCG................................................................................................ 25 3 3 0.67 2 0 2 0
................................................................TGATATGTTTGATATATTAGGTTAAG............................................................................................... 26 3 3 0.67 2 2 0 0
................................................................TGATATGTTTGATATATTAGGTTAGA............................................................................................... 26 3 3 0.67 2 2 0 0
.................................................................GAGATGTTTGATATATTAGGTTGT................................................................................................ 24 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTTTT............................................................................................... 26 1 2 0.50 1 1 0 0
...............................................................ATGATATGTTTGATATATTAGGTTA................................................................................................. 25 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGCTA................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTCATATATTAGGTTGT................................................................................................ 25 1 2 0.50 1 1 0 0
...............................................................ATGATATGTTTGATATATTAGGTA.................................................................................................. 24 2 4 0.50 2 2 0 0
................................................................TGATATGTTTTATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATTTGTTTGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATCTATTAGGTTC................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGCTATGTTTGATATATTAGGTTCG................................................................................................ 25 3 2 0.50 1 0 1 0
.............................................................GTTTGATATGTTTGATATATTAG..................................................................................................... 23 1 2 0.50 1 1 0 0
....................................................................................................ACTCTATATCAAGCATATTCCTAT............................................................. 24 2 2 0.50 1 1 0 0
.....................................................................................................CTATATATCAAGCATATTCCTACT............................................................ 24 1 2 0.50 1 1 0 0
.................................................................GATATGTTTGATATATTAGGCCG................................................................................................. 23 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATATTAGGTTGAGT.............................................................................................. 27 3 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTAG................................................................................................. 24 1 2 0.50 1 1 0 0
................................................................TGATACGTTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
....................................................................ATGTTTGATATATTAGGTTGT................................................................................................ 21 0 2 0.50 1 1 0 0
................................................................TGATATGTTTGGTATATTAGGTA.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGTTTAATATATTAGGTTGT................................................................................................ 25 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTA.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTATGTTA................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATCTTTGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
....................................................................................................ACTCTATATCAAGCATCTTCCTA.............................................................. 23 2 2 0.50 1 1 0 0
.................................................................GATATGTTTGATATATTAGGTAA................................................................................................. 23 2 2 0.50 1 1 0 0
.................................................................GATATGTTTGGTATATTAGGTCG................................................................................................. 23 2 2 0.50 1 0 1 0
................................................................TTATATGTTTGATATATTAGG.................................................................................................... 21 1 2 0.50 1 0 0 1
................................................................GGATATGTTTGCTATATTAGGTAG................................................................................................. 24 3 2 0.50 1 0 1 0
................................................................TGATATGTTTGATAAATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTCGGAT.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGCT................................................................................................... 22 1 2 0.50 1 0 0 1
................................................................TGATATGTTTGATATATTTGGTTT................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGGTATATTAGGTTT................................................................................................. 24 2 2 0.50 1 1 0 0
........................................................................................................TATATCAAGCATATTCCT............................................................... 18 0 2 0.50 1 0 0 1
................................................................TGATATGTTTGATGTATTAGGTTA................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATT....................................................................................................... 18 0 2 0.50 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTTCG................................................................................................ 25 3 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATATTAGGTTGTAT.............................................................................................. 27 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGAGCTATTAGGTCG................................................................................................. 24 3 2 0.50 1 0 1 0
................................................................AGATATGTTTGATATATTAGGTAG................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTG.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTGG................................................................................................. 24 1 2 0.50 1 0 1 0
....................................................................................................ACTATATATCAAGCAGATTCCT............................................................... 22 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGTTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATAATAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATGTATTTGGTTG................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATTTATTAGGTA.................................................................................................. 23 2 2 0.50 1 1 0 0
.....................................................................................................CTATATATCAAGCATATTCCTATA............................................................ 24 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTTTT................................................................................................ 25 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGTTATATTAGGTTA................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGTCA.............................................................................................. 27 1 2 0.50 1 1 0 0
................................................................TGCTATGTTTGATATATTAGGTTG................................................................................................. 24 1 2 0.50 1 0 1 0
................................................................TGGTATGTTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGAT............................................................................................... 26 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGTTATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
.........................................................................................................ATATCAAGCATATTCCT............................................................... 17 0 2 0.50 1 0 0 1
................................................................TGATATGTTTGATGTATTAGGT................................................................................................... 22 1 2 0.50 1 1 0 0
................................................................TGTTATGTTTGATCTATTAGGTTG................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................CGATATGTTTGATATATTAGGTAG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTATGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATCTATTAGGAT.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATTTTTGATATATTAGGTTG................................................................................................. 24 1 2 0.50 1 0 0 1
...................................................................................................AACTATATATCAAGCATATTCATA.............................................................. 24 1 2 0.50 1 1 0 0
................................................................TGATATGGTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGAA............................................................................................... 26 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATTTATTAGGTTT................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATTTATTAGG.................................................................................................... 21 1 2 0.50 1 1 0 0
.......................................................................................................ATATATCAAGCATATTCCT............................................................... 19 0 2 0.50 1 0 0 1
....................................................................................................ACTATATATCGAGCATATTCCT............................................................... 22 1 2 0.50 1 1 0 0
...............................................................ATGATATGTTTGATATATTAGGTTAA................................................................................................ 26 3 4 0.50 2 2 0 0
................................................................TGATATGTATGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATATTAGGTAAT................................................................................................ 25 2 2 0.50 1 1 0 0
.....................................................................................................CTATATATCAAGCATATTCCTA.............................................................. 22 0 2 0.50 1 1 0 0
................................................................TGATATGTTTGATCTATTAGGTTGA................................................................................................ 25 2 2 0.50 1 1 0 0
.....................................................................................................CTATATATCAAGCATATTCCTAA............................................................. 23 1 2 0.50 1 1 0 0
................................................................TGACATGTTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATACATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
....................................................................................................ACTATATATCAAGCATACTCCTA.............................................................. 23 1 2 0.50 1 1 0 0
................................................................TAATATGTTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGGTT................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGTTT.............................................................................................. 27 1 2 0.50 1 1 0 0
.....................................................................................................CTATATATCAAGCATATTCCTAGA............................................................ 24 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGCTCG................................................................................................ 25 3 2 0.50 1 0 1 0
....................................................................................................ACTATATATCAAGCGTATTCCT............................................................... 22 1 2 0.50 1 1 0 0
................................................................TAATATGTTTGATATATTAGGTTG................................................................................................. 24 1 2 0.50 1 0 0 1
................................................................TGATATGATTGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATATTCGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
.................................................................GATATGTTTGATATATTAGGTGG................................................................................................. 23 1 2 0.50 1 0 1 0
................................................................AGAAATGTTTGATATATTAGGTT.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGATG................................................................................................. 24 1 2 0.50 1 1 0 0
................................................................TGATATGTGTGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATATTAGGTGT................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGATATGGTTGATATATTAGGTTCG................................................................................................ 25 3 2 0.50 1 0 1 0
................................................................TGATATGTTAGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTAATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
....................................................................ACGTTTGATATATTAGGTTGT................................................................................................ 21 1 2 0.50 1 1 0 0
.................................................................GAGATGTTTGATATATTAGGTTG................................................................................................. 23 1 2 0.50 1 0 0 1
................................................................TGATATGTTTGATATATTAGCTTCG................................................................................................ 25 3 2 0.50 1 0 1 0
....................................................................................................ACTATATATCAAGCATATTCCTAA............................................................. 24 1 2 0.50 1 1 0 0
...............................................................ATGATATGTTTGATATATTAGGTTAT................................................................................................ 26 2 2 0.50 1 1 0 0
................................................................TGATATGTTTGATCTATTAGGTA.................................................................................................. 23 2 2 0.50 1 1 0 0
................................................................TGATATGATTGATATATTAGGCCG................................................................................................. 24 3 2 0.50 1 0 1 0
................................................................TGGTATGTTTGATATATTAGGTTG................................................................................................. 24 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGTA............................................................................................... 26 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTAGGGCG................................................................................................. 24 2 2 0.50 1 0 1 0
....................................................................................................ACTATATATCAAGTATATTCCTA.............................................................. 23 1 2 0.50 1 1 0 0
....................................................................................................ACTATATATCAAGCATATTCCC............................................................... 22 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATGTATTAGG.................................................................................................... 21 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGAGATATTAGGTTG................................................................................................. 24 1 2 0.50 1 0 1 0
................................................................TGATCTGTTTGATATATTAGGT................................................................................................... 22 1 2 0.50 1 1 0 0
................................................................AGATATGTTTGATATATTAGGTT.................................................................................................. 23 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTCGGT................................................................................................... 22 1 2 0.50 1 1 0 0
.................................................................GATATGTTTGATACATTAGGTCG................................................................................................. 23 2 2 0.50 1 0 1 0
................................................................TGATCTGTTTGATATATTAGGTTCG................................................................................................ 25 3 2 0.50 1 0 1 0
.....................................................................................................CTATATATCAAGCATATTCC................................................................ 20 0 2 0.50 1 1 0 0
................................................................TGCTATGTTTGATATATTAGGTCG................................................................................................. 24 2 2 0.50 1 0 1 0
................................................................TGATATGTTTGATATCTTAGGTT.................................................................................................. 23 1 2 0.50 1 0 0 1
................................................................TGATATGTTTGATTTATTAGGTTGT................................................................................................ 25 1 2 0.50 1 1 0 0
................................................................TGATATGTTTGATATATTCGGTTA................................................................................................. 24 2 2 0.50 1 1 0 0
................................................................TGTTATGTTTGATCTATTAGGTT.................................................................................................. 23 2 3 0.33 1 1 0 0
................................................................TGAAATGTTTGATATATTAGGT................................................................................................... 22 1 3 0.33 1 1 0 0
................................................................TGATATGTTTCATATATTAGGTCG................................................................................................. 24 2 3 0.33 1 0 1 0
................................................................TGATATGTTTGATATATTAGGCA.................................................................................................. 23 2 3 0.33 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTGAAT.............................................................................................. 27 3 3 0.33 1 1 0 0
................................................................TGATATGTTTCATATATTAGGT................................................................................................... 22 1 3 0.33 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTAA................................................................................................. 24 3 3 0.33 1 1 0 0
.................................................................GATGTGTTTGATATATTAGGTTA................................................................................................. 23 2 3 0.33 1 1 0 0
................................................................TGATATGTTTGATATATTATGATG................................................................................................. 24 2 3 0.33 1 1 0 0
................................................................TGATATGTTTGATATATCAGGTCG................................................................................................. 24 2 3 0.33 1 0 1 0
....................................................................................................ACTATATATCAAGCATCTTCCTAA............................................................. 24 2 3 0.33 1 1 0 0
................................................................CGATATGTTTGCTATAATAGGTT.................................................................................................. 23 3 3 0.33 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGCCG................................................................................................. 24 3 3 0.33 1 0 1 0
................................................................TGATATGTTTGCTAAATTAGGTTA................................................................................................. 24 3 3 0.33 1 1 0 0
...............................................................ATGATATGTTTGATATATTAGGTTT................................................................................................. 25 2 3 0.33 1 1 0 0
................................................................TGATATGTTTGATCTATTAGGTAT................................................................................................. 24 3 3 0.33 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTTTGA............................................................................................... 26 3 3 0.33 1 1 0 0
................................................................TGATATGTTTGATATATTAGGTAAA................................................................................................ 25 3 7 0.29 2 2 0 0
.........................................................................................................ATATCAAGCATATTCC................................................................ 16 0 4 0.25 1 0 0 1
................................................................TGATATGTTTGATCTATTAGGTTAA................................................................................................ 25 3 4 0.25 1 1 0 0
................................................................TGATATGTTTGCTATATTAGGTTAAT............................................................................................... 26 3 4 0.25 1 1 0 0
................................................................GGATATGTTTGCTATATTAGGTC.................................................................................................. 23 3 5 0.20 1 1 0 0
..............................................................GTTGATATGTTTGATATATTAG..................................................................................................... 22 2 5 0.20 1 1 0 0
..........................................................................................................TATCAAGCATATTCCTA.............................................................. 17 0 5 0.20 1 0 0 1
................................................................TGATATGTTTGATATATTCGGGTT................................................................................................. 24 3 5 0.20 1 1 0 0
................................................................TGACATGTATGATATATTAGGTT.................................................................................................. 23 2 6 0.17 1 1 0 0
..................................................................TGATGTTTGATATATTAGGTT.................................................................................................. 21 2 6 0.17 1 0 0 1
................................................................TGATATGTTTGATATATTAGGCAT................................................................................................. 24 3 8 0.13 1 1 0 0
................................................................TGGTATGTTTGATCTATTAGGTTC................................................................................................. 24 3 8 0.13 1 1 0 0
................................................................TGTTATGTTTGCTATATTAGGTTT................................................................................................. 24 3 10 0.10 1 1 0 0
................................................................TGATATGTTTGTTATATTAGGTGT................................................................................................. 24 3 12 0.08 1 1 0 0
...............................................................TTTAGATGTTTGATATATTAGGTT.................................................................................................. 24 3 13 0.08 1 0 0 1
...........................................................................................................ATCAAGCATATTCCT............................................................... 15 0 14 0.07 1 0 0 1
...............................................................ATGATATGTTTGATATATT....................................................................................................... 19 1 20 0.05 1 1 0 0

Anti-sense strand reads

GAAGCCATGACATTGATAAGAGTTCGAGTGAGTTTGGACCTACGGAAAAGACGTCCGGAGACACACTATACAAACTATATAATCCAACAATAAATTAGGTTGATATATAGTTCGTATAAGGATGTCACAGAACGGGACAGAGGCCCCCAGGATTGTTTCAAATCTTCCGTTGTTCTTTCTTATAC
************************************************..(((((...(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..)))))...)))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:51 PM