ID:

rno-mir-18a

Coordinate:

chr15:100180015-100180110 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-28.7 -28.6 -28.6

Sense Strand Reads

CTGCCTCGAGAGGGGCTGGGCTGGGCGCCGTGGGGAGGGCCTGCTGGCGCTGCGTGCTTTTTGTTCTAAGGTGCATCTAGTGCAGATAGTGAAGTAGACTAGCATCTACTGCCCTAAGTGCTCCTTCTGGCATAAGAAGTTATGTCCTCATCCAACCCGAGGCAAGCAAGCGTGTAGGGGTCTCAATAGTTCTGTT
***************************************************(((((((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).)))))))).)))))***************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..................................................................TAAGGTGCATCTAGTGCAGATAG........................................................................................................... 23 0 1 2485.00 2485 2453 29 3
..................................................................TAAGGTGCATCTAGTGCAGAT............................................................................................................. 21 0 1 704.00 704 676 28 0
..................................................................TAAGGTGCATCTAGTGCAGATA............................................................................................................ 22 0 1 655.00 655 648 6 1
..................................................................TAAGGTGCATCTAGTGCAGATAGT.......................................................................................................... 24 0 1 446.00 446 410 36 0
..................................................................TAAGGTGCATCTAGTGCAGATAGA.......................................................................................................... 24 1 1 315.00 315 300 14 1
..................................................................TAAGGTGCATCTAGTGCAGATAA........................................................................................................... 23 1 1 227.00 227 222 5 0
..................................................................TAAGGTGCATCTAGTGCAGATAT........................................................................................................... 23 1 1 197.00 197 194 2 1
...................................................................AAGGTGCATCTAGTGCAGATAG........................................................................................................... 22 0 1 83.00 83 80 3 0
..................................................................TAAGGTGCATCTAGTGCAGA.............................................................................................................. 20 0 1 73.00 73 70 3 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGT.................................................................. 23 1 1 72.00 72 71 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAAA.......................................................................................................... 24 2 1 54.00 54 53 1 0
...................................................................AAGGTGCATCTAGTGCAGAT............................................................................................................. 20 0 1 40.00 40 38 2 0
..................................................................TAAGGTGCATCTAGTGCAGATT............................................................................................................ 22 1 1 37.00 37 33 4 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGG.................................................................. 23 0 1 36.00 36 34 2 0
...................................................................AAGGTGCATCTAGTGCAGATAGT.......................................................................................................... 23 0 1 35.00 35 33 2 0
.................................................................ATAAGGTGCATCTAGTGCAGATAG........................................................................................................... 24 1 1 30.00 30 26 4 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGT................................................................. 24 1 1 30.00 30 30 0 0
..................................................................TAAGGTGCATCTAGTGCAG............................................................................................................... 19 0 1 29.00 29 28 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAGAA......................................................................................................... 25 2 1 27.00 27 26 1 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGA.................................................................. 23 1 1 24.00 24 24 0 0
...................................................................AAGGTGCATCTAGTGCAGATA............................................................................................................ 21 0 1 22.00 22 21 0 1
..................................................................TAAGGTGCATCTAGTGCAGATCG........................................................................................................... 23 1 1 19.00 19 14 0 5
..................................................................TAAGGGGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 19.00 19 18 0 1
..................................................................TAAGGTGCATCTAGTGCAGATAAT.......................................................................................................... 24 1 1 15.00 15 13 2 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTT......................................................................................................... 25 1 1 15.00 15 15 0 0
.................................................................ATAAGGTGCATCTAGTGCAGATA............................................................................................................ 23 1 1 14.00 14 13 1 0
...................................................................AAGGTGCATCTAGTGCAGATAGA.......................................................................................................... 23 1 1 14.00 14 14 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTT................................................................. 24 2 1 14.00 14 13 1 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGAA................................................................ 25 1 1 14.00 14 14 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATAG........................................................................................................... 23 1 1 13.00 13 13 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCT.................................................................... 21 0 1 13.00 13 13 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGAAA........................................................................................................ 26 2 1 11.00 11 8 3 0
..................................................................TAAGGTGCATCTAGTGCAGAAA............................................................................................................ 22 1 1 11.00 11 9 2 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTG................................................................... 22 0 1 11.00 11 11 0 0
.................................................................ATAAGGTGCATCTAGTGCAGAT............................................................................................................. 22 1 1 11.00 11 5 6 0
..................................................................TAAGGTGCATCTAGTGCAGATTA........................................................................................................... 23 2 1 10.00 10 10 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTAA................................................................ 25 2 1 9.00 9 9 0 0
...................................................................AAGGTGCATCTAGTGCAGATAT........................................................................................................... 22 1 1 9.00 9 9 0 0
..................................................................TAAGGTGCATCTAGTGCAGAA............................................................................................................. 21 1 2 9.00 18 18 0 0
..................................................................TAAGGCGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 9.00 9 9 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTGAAG...................................................................................................... 28 0 1 9.00 9 8 1 0
..................................................................TACGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 8.00 8 8 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTGA........................................................................................................ 26 0 1 7.00 7 6 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAAAT......................................................................................................... 25 3 1 7.00 7 7 0 0
..................................................................TAAGGTGCATCTAGTGCAGATTT........................................................................................................... 23 2 1 7.00 7 7 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGA................................................................. 24 1 1 7.00 7 7 0 0
....................................................................AGGTGCATCTAGTGCAGATAG........................................................................................................... 21 0 1 6.00 6 5 1 0
..................................................................TAAGGTGCATATAGTGCAGATAG........................................................................................................... 23 1 1 6.00 6 6 0 0
..................................................................TAAGGTGCATCCAGTGCAGATAG........................................................................................................... 23 1 1 6.00 6 6 0 0
..................................................................TAAGGTGCATCTAGTGCAA............................................................................................................... 19 1 1 6.00 6 6 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTTT................................................................ 25 3 1 6.00 6 6 0 0
...................................................................AAGGTGCATCTAGTGCAGATAA........................................................................................................... 22 1 1 6.00 6 6 0 0
...................................................................AAGGTGCATCTAGTGCAGATT............................................................................................................ 21 1 1 5.00 5 5 0 0
..................................................................TAAGGTGAATCTAGTGCAGATAG........................................................................................................... 23 1 1 5.00 5 5 0 0
..................................................................TAAGGGGCATCTAGTGCAGAT............................................................................................................. 21 1 1 5.00 5 5 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGTA................................................................ 25 1 1 5.00 5 5 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCA................................................................ 25 0 1 5.00 5 4 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAAAA......................................................................................................... 25 3 2 5.00 10 10 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGTT................................................................ 25 2 1 5.00 5 4 1 0
..................................................................TAAGGTGCCTCTAGTGCAGATA............................................................................................................ 22 1 1 5.00 5 5 0 0
..................................................................TAAGGAGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 5.00 5 5 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTA................................................................. 24 2 1 5.00 5 5 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTAA........................................................................................................ 26 1 1 5.00 5 5 0 0
..................................................................TAAGGTGCCTCTAGTGCAGAT............................................................................................................. 21 1 1 5.00 5 5 0 0
..................................................................TAAGGTGCATCTAGTGCAGATTG........................................................................................................... 23 1 1 4.00 4 4 0 0
..................................................................TAAGGGGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 4.00 4 4 0 0
..................................................................TAAGGTGCATCTAGCGCAGATAG........................................................................................................... 23 1 1 4.00 4 4 0 0
..................................................................TAAGGTGCATGTAGTGCAGATAG........................................................................................................... 23 1 1 4.00 4 4 0 0
..................................................................TAAGGTGCATCTAGGGCAGATAG........................................................................................................... 23 1 1 4.00 4 4 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGAA................................................................. 24 2 1 4.00 4 4 0 0
..................................................................TAAGGTGCATCTAATGCAGATAG........................................................................................................... 23 1 1 4.00 4 4 0 0
.................................................................ATAAGGTGCATCTAGTGCAGATAGT.......................................................................................................... 25 1 1 4.00 4 1 3 0
..................................................................TAAGGTGCATCTAGTGCAGATTAA.......................................................................................................... 24 3 1 4.00 4 4 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAAG.......................................................................................................... 24 2 1 4.00 4 4 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGAG......................................................................................................... 25 1 1 4.00 4 4 0 0
..................................................................TGAGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 4.00 4 3 1 0
..................................................................TCAGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 3.00 3 3 0 0
..................................................................TAAGGTGCATCTACTGCAGATAG........................................................................................................... 23 1 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGAG................................................................. 24 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATTG........................................................................................................... 23 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCATCTAGTGCAAATAG........................................................................................................... 23 1 1 3.00 3 3 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATAA........................................................................................................... 23 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCATCTAGTGCAGATCGA.......................................................................................................... 24 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCATCTAGTGCAGATATA.......................................................................................................... 24 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCATCTAGAGCAGATAG........................................................................................................... 23 1 1 3.00 3 3 0 0
..................................................................TAAGGAGCATCTAGTGCAGAT............................................................................................................. 21 1 1 3.00 3 3 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATAGA.......................................................................................................... 24 2 1 3.00 3 3 0 0
....................................................................AGGTGCATCTAGTGCAGATAGT.......................................................................................................... 22 0 1 3.00 3 2 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTGAA....................................................................................................... 27 0 1 3.00 3 2 1 0
..................................................................TAAGGTGCATCTAGTGCA................................................................................................................ 18 0 1 3.00 3 2 1 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGTAT............................................................... 26 1 1 3.00 3 3 0 0
.....................................................................GGTGCATCTAGTGCAGATAG........................................................................................................... 20 0 1 3.00 3 2 1 0
..................................................................TAAGGTGCATCTAGTGCAGAAAA........................................................................................................... 23 2 1 3.00 3 3 0 0
..................................................................AAAGGTGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTAAG................................................................. 24 3 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTC..................................................................... 20 0 1 3.00 3 3 0 0
..................................................................TAGGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 3.00 3 3 0 0
..................................................................TAAGGTGCATATAGTGCAGAT............................................................................................................. 21 1 1 3.00 3 3 0 0
......................................................................GTGCATCTAGTGCAGAT............................................................................................................. 17 0 1 3.00 3 3 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGAT......................................................................................................... 24 2 1 3.00 3 3 0 0
..................................................................TAAGGAGCATCTAGTGCAGATA............................................................................................................ 22 1 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTAGA................................................................. 24 2 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTTAA............................................................... 26 3 1 3.00 3 3 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGAAA................................................................ 25 2 1 3.00 3 3 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATGG........................................................................................................... 23 2 1 3.00 3 3 0 0
..............................................................GTCGTAAGGTGCATCTAGTGCAGATAG........................................................................................................... 27 2 1 2.00 2 2 0 0
..................................................................TACGGTGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTGA........................................................................................................ 25 0 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGA.............................................................................................................. 19 0 1 2.00 2 1 1 0
..................................................................TAAGGTGCATCTAGCGCAGA.............................................................................................................. 20 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATATT.......................................................................................................... 24 1 1 2.00 2 1 0 1
..................................................................TAAGGGGCATCTAGTGCAGATAT........................................................................................................... 23 2 1 2.00 2 2 0 0
..................................................................TAATGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGCTA............................................................................................................ 21 1 1 2.00 2 2 0 0
......................................................................GTGCATCTAGTGCAGATAG........................................................................................................... 19 0 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGATAAA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................AATAAGGTGCATCTAGTGCAGAT............................................................................................................. 23 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATGATT......................................................................................................... 25 3 1 2.00 2 2 0 0
..................................................................AAAGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCACATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGATAAT.......................................................................................................... 23 1 1 2.00 2 2 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTAT................................................................ 25 3 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTTT........................................................................................................ 26 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATGGA.......................................................................................................... 24 2 1 2.00 2 2 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGTAA............................................................... 26 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGAAGAT............................................................................................................. 21 1 1 2.00 2 2 0 0
.......................................................................TGCATCTAGTGCAGATAGTCG........................................................................................................ 21 2 1 2.00 2 0 0 2
..................................................................TAAGTTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
..................................................................TAAGGCGCATCTAGTGCAGATAGA.......................................................................................................... 24 2 1 2.00 2 2 0 0
..................................................................TACGGTGCATCTAGTGCAGATA............................................................................................................ 22 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATTTA.......................................................................................................... 24 3 1 2.00 2 2 0 0
..........................................................................................................TACTGCCCTAAGTGCTCCTTCT.................................................................... 22 0 1 2.00 2 2 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTAAA................................................................. 24 3 1 2.00 2 2 0 0
...................................................................ATGGTGCATCTAGTGCAGATAG........................................................................................................... 22 1 1 2.00 2 2 0 0
.................................................................ATAAGGTGCATCTAGTGCAGATAT........................................................................................................... 24 2 1 2.00 2 2 0 0
..................................................................TAAGGCGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGCGCAGAT............................................................................................................. 21 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGC.......................................................................................................... 24 1 1 2.00 2 2 0 0
.................................................................ATAAGGTGCATCTAGTGCAGATAAT.......................................................................................................... 25 2 1 2.00 2 2 0 0
..................................................................TATGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 1 1 0
..................................................................TAAGGTGCATATAGTGCAGATAT........................................................................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................................TACTGCCCTAAGTGCTCCTTCTGA.................................................................. 24 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGGA......................................................................................................... 25 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGCGCAGATAGA.......................................................................................................... 24 2 1 2.00 2 2 0 0
..................................................................TAAGGTCCATCTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGCTAG........................................................................................................... 22 1 1 2.00 2 2 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGAT................................................................. 24 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCCGATAGT.......................................................................................................... 24 1 1 2.00 2 1 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAAGT......................................................................................................... 25 3 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTTA........................................................................................................ 26 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGAAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
.......................................................................TGCATCTAGTGCAGATAG........................................................................................................... 18 0 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGAGCAGAT............................................................................................................. 21 1 1 2.00 2 1 1 0
..................................................................TAAGGAGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATTTAGTGCAGATAG........................................................................................................... 23 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGATGG........................................................................................................... 23 1 1 2.00 2 2 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTA......................................................................................................... 24 1 1 2.00 2 2 0 0
..................................................................TAAGGTGCATATAGTGCAGATA............................................................................................................ 22 1 1 2.00 2 2 0 0
....................................................................AGGTGCATCTAGTGCAGAT............................................................................................................. 19 0 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGAGCAGATA............................................................................................................ 22 1 1 2.00 2 2 0 0
.................................................................ATAAGGTGCATCTAGTGCAGATAGA.......................................................................................................... 25 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATCG........................................................................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................................AACTGCCCTAAGTGCTCCTTCTGT.................................................................. 24 2 1 2.00 2 2 0 0
..................................................................TAAGGTGCATCTAGTGCAGAAAT........................................................................................................... 23 2 2 1.50 3 3 0 0
..........................................................................ATCTAGTGCAGATAG........................................................................................................... 15 0 2 1.50 3 0 3 0
..................................................................TAAGGTGCATCTACTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCAA............................................................... 26 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGAAAT....................................................................................................... 27 3 1 1.00 1 1 0 0
.................................................................TTACGGTGCATCTAGTGCAGATA............................................................................................................ 23 2 1 1.00 1 1 0 0
..................................................................TAACGTGCATCTAGTGCAGAT............................................................................................................. 21 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGAAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCACCTTCTGT.................................................................. 23 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGCGCTCCTTCT.................................................................... 21 1 1 1.00 1 1 0 0
..................................................................TAGGGTGCATCTAGTGCAGAT............................................................................................................. 21 1 1 1.00 1 0 1 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTG......................................................................................................... 25 0 1 1.00 1 1 0 0
..................................................................TAAGGTGCACCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGTTA................................................................ 25 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCTTCTAGTGCAGAT............................................................................................................. 21 1 1 1.00 1 1 0 0
............................................................................................................CTGCCCTAAGTGCTCCTTCTGGAA................................................................ 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGAAAGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTGAAG...................................................................................................... 27 0 1 1.00 1 1 0 0
..........................................................................................................TACTGCCCTAAGTGCTCCTA...................................................................... 20 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTGGCAT............................................................... 26 0 1 1.00 1 0 1 0
..................................................................GAAGGTGCATCTAGTGCAGATAAA.......................................................................................................... 24 3 1 1.00 1 1 0 0
...................................................................AAGGAGCATCTAGTGCAGATAG........................................................................................................... 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCAAGAGCAGATA............................................................................................................ 22 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTCCAGATAGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
...................................................................CAGGTGCATCTAGTGCAGATAG........................................................................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................................TACTGCCCTAAGTGCTCCTTCTG................................................................... 23 0 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAC........................................................................................................... 23 1 1 1.00 1 1 0 0
.........................................................................................................GAACTGCCCTAAGTGCTCCTTCTGG.................................................................. 25 2 1 1.00 1 1 0 0
.................................................................TTAAGGTGCATCTAGTGCAGATAG........................................................................................................... 24 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTTAA................................................................. 24 3 1 1.00 1 1 0 0
..................................................................TAAGGTACATCTAGTGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAGGGTGCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTAT........................................................................................................ 26 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATTTAGTGCAGATAGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
.................................................................ATAAGGTTCATCTAGTGCAGAT............................................................................................................. 22 2 1 1.00 1 0 1 0
..................................................................TGAGGTGCATCTAGTGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGAGCTCCTTCTGG.................................................................. 23 1 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTGAAGT..................................................................................................... 28 0 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATGGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATT............................................................................................................ 22 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGAAGATGG........................................................................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGCGCTCCTTCTGGT................................................................. 24 2 1 1.00 1 1 0 0
..................................................................TAGGGTGCATCTAGTGCAG............................................................................................................... 19 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATTTAGTGCAGATAT........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATCG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAATGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
............................................................................................................CTGCCCTAAGTGCTCCTTCTGGTA................................................................ 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAATGCAGAT............................................................................................................. 21 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGAGTT....................................................................................................... 27 3 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGA.............................................................................................................. 20 1 1 1.00 1 0 1 0
..................................................................TAAGGTGCATCTAGTCCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATATTT......................................................................................................... 25 2 1 1.00 1 1 0 0
.................................................................ATAAGGTGCATCTCGTGCAGATAG........................................................................................................... 24 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGAAG............................................................................................................... 19 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATAT........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGCCC........................................................................................................ 26 3 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGCGCTCCTTCTGT.................................................................. 23 2 1 1.00 1 1 0 0
..................................................................CAAGGTGCCTCTAGTGCAGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGG.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGATGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCCTCTAGTGCAGATAGAAA........................................................................................................ 26 3 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCATATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTCCATCTAGTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAAGTGCATCTAGTGCAGATTG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTACAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................AAAGGTGCATCTAGTGCAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTACATCTAGTGCAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTACTGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGTAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTGTATCTAGTGCCGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTACTGCAGA.............................................................................................................. 20 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCAGA.................................................................. 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTACTGCAAATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGCGCATCTAGAGCAGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TACGGTGCATCTAGTGCAG............................................................................................................... 19 1 1 1.00 1 0 1 0
.................................................................ATAAGGTGCATCTAGCGCAGATAG........................................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCACCTTCTGG.................................................................. 23 1 1 1.00 1 1 0 0
..................................................................CAAGGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTCCTGGT................................................................. 24 2 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTACTGCAGATAG........................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGAA......................................................................................................... 24 2 1 1.00 1 0 1 0
................................................................AATAAGGTGCATCTAGTGCAGATAT........................................................................................................... 25 3 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTTG........................................................................................................ 26 2 1 1.00 1 1 0 0
.................................................................ATAAGGTGCATCTAGTGCAGAAAG........................................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTAAGTGCTCCTTCTCGTA................................................................ 25 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCAAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCAAGTGCAGATAGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATAGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
....................................................................AGGTGCATCTAGTGCAGA.............................................................................................................. 18 0 1 1.00 1 1 0 0
...............................................................AAATAAGGTGCATCTAGTGCAGATA............................................................................................................ 25 3 1 1.00 1 1 0 0
................................................................AGTAAGGTGCATCTAGTGCAGATAGT.......................................................................................................... 26 2 1 1.00 1 1 0 0
....................................................................AGGTGCATCTAGTGCAGATAGTA......................................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................ATAAGGTGCATCTAGCGCAGATA............................................................................................................ 23 2 1 1.00 1 1 0 0
............................................................................................................CTGCCCTAAGTGCTCCTTCTGG.................................................................. 22 0 1 1.00 1 1 0 0
..................................................................TAAGGAGCATCTAGTGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGCTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAACGTGCATCTAGTGCAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAAA.............................................................................................................. 20 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCCTCAGTGCTCCTTCTGGCA................................................................ 25 1 1 1.00 1 1 0 0
.................................................................TTACGGTGCATCTCGTGCAGATAG........................................................................................................... 24 3 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGTAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAAC.......................................................................................................... 24 2 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGTAGAT............................................................................................................. 21 2 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTG......................................................................................................... 24 0 1 1.00 1 1 0 0
...................................................................GAGGTGCATCTAGTGCAGAT............................................................................................................. 20 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCCTCTAGTGCAGA.............................................................................................................. 20 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAAGA......................................................................................................... 25 3 2 1.00 2 2 0 0
......................................................................GTGCATCTAGTGCAGATA............................................................................................................ 18 0 1 1.00 1 0 1 0
..................................................................TAACGTGCATCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATC............................................................................................................ 22 2 1 1.00 1 1 0 0
..................................................................TAAGTTGCATCTAGTGCAGAT............................................................................................................. 21 1 1 1.00 1 0 1 0
..........................................................................................................TACTGCCCTAAGTGCTCCTTCTGT.................................................................. 24 1 1 1.00 1 1 0 0
...................................................................AAGGTACATCTAGTGCAGATA............................................................................................................ 21 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCTTCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTGAAGTAG................................................................................................... 31 0 1 1.00 1 1 0 0
..................................................................AAAGGTGCCTCTAGTGCAGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTTTA....................................................................................................... 27 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATTGA.......................................................................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................................................ATAAGAAGTTATGTCCTCATCCAACCC...................................... 27 0 1 1.00 1 1 0 0
....................................................................AGGTGCATCTAGTGCAGATA............................................................................................................ 20 0 1 1.00 1 1 0 0
..................................................................TAAGGTTCATCTAGTGCAGATAGA.......................................................................................................... 24 2 1 1.00 1 0 1 0
..................................................................TAAGGTGCATCAAGTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCGTCTAGTGCAGATAG........................................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................TATGGTGCATCTAGTGCAGATA............................................................................................................ 22 1 1 1.00 1 1 0 0
...........................................................................................................ACTGCCATAAGTGCTCCTTCT.................................................................... 21 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCCAGTGCAGATACT.......................................................................................................... 24 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGCGCAGATAA........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATGT........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAACGTGCCTCTAGTGCAGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCTTCTAGTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATTGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATTT........................................................................................................... 22 2 1 1.00 1 1 0 0
..................................................................TAAGGTGCATATAGTGCAGATAGT.......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGGGCATCTAGTGCAGATAGTAAA....................................................................................................... 27 2 1 1.00 1 0 1 0
..................................................................TAAGGTGCATTTAGTTCAGATAG........................................................................................................... 23 2 1 1.00 1 1 0 0
...................................................................AAGGTGCATCTAGTGCAGATAGTT......................................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................TAAGGTGCATCTAGTGCAGATAGTGAAGAA.................................................................................................... 30 1 1 1.00 1 1 0 0

Anti-sense strand reads

GACGGAGCTCTCCCCGACCCGACCCGCGGCACCCCTCCCGGACGACCGCGACGCACGAAAAACAAGATTCCACGTAGATCACGTCTATCACTTCATCTGATCGTAGATGACGGGATTCACGAGGAAGACCGTATTCTTCAATACAGGAGTAGGTTGGGCTCCGTTCGTTCGCACATCCCCAGAGTTATCAAGACAA
***************************************************(((((((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).)))))))).)))))***************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM