ID:rno-mir-188 |
Coordinate:chrX:16110270-16110349 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -35.4 | -35.3 | -35.3 |
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CCATAGAAAGCACCTACCTGTTGTGCCAAGAGAGTGAACCCTTCCCTGCTCCCTCTCTCACATCCCTTGCATGGTGGAGGGCGAGCTCTCTGAAAACTCCTCCCACATGCAGGGTTTGCAGGATGGTGAGCTTCAGCTTTCCTTGCTCTCTTGTGCATGGTGGACATATGCATAGATACA
*********************************************..((((((..(((..((..(((((((((..((((((................))))))..)))))))))..))..))).)).))))....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ............................................................CATCCCTTGCATGGTGGAGGGCAT................................................................................................ | 24 | 2 | 1 | 48.00 | 48 | 47 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAA................................................................................................ | 24 | 1 | 1 | 26.00 | 26 | 26 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCA................................................................................................. | 23 | 1 | 1 | 25.00 | 25 | 25 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCT................................................................................................. | 23 | 1 | 1 | 22.00 | 22 | 21 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAT............................................................................................... | 25 | 2 | 1 | 22.00 | 22 | 22 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAT............................................................................................... | 25 | 2 | 1 | 16.00 | 16 | 16 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAA............................................................................................... | 25 | 2 | 1 | 15.00 | 15 | 15 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAAA................................................................................................ | 24 | 2 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGT................................................................................................ | 24 | 1 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTAT................................................................................................ | 24 | 3 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTTT............................................................................................... | 25 | 3 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTAA................................................................................................ | 24 | 2 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGC.................................................................................................. | 22 | 0 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTT................................................................................................ | 24 | 2 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAA................................................................................................. | 23 | 2 | 2 | 11.00 | 22 | 20 | 0 | 2 |
| ............................................................CATCCCTTGCATGGTGGAGGGTT................................................................................................. | 23 | 2 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAA............................................................................................... | 25 | 2 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCG................................................................................................. | 23 | 0 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTA................................................................................................. | 23 | 2 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCT................................................................................................. | 22 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTA................................................................................................ | 24 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGA................................................................................................ | 24 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCATT............................................................................................... | 25 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAAT................................................................................................ | 24 | 3 | 2 | 6.50 | 13 | 12 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCCG................................................................................................ | 24 | 2 | 1 | 6.00 | 6 | 0 | 6 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCA............................................................ | 21 | 0 | 1 | 6.00 | 6 | 5 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCATA............................................................................................... | 25 | 3 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAAT.............................................................................................. | 26 | 3 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAATT.............................................................................................. | 26 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCTAT............................................................................................... | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCA................................................................................................. | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTGCA............................................................ | 22 | 0 | 1 | 4.00 | 4 | 3 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTATAT............................................................................................. | 27 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAAA.............................................................................................. | 26 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTTT................................................................................................ | 24 | 3 | 3 | 3.33 | 10 | 10 | 0 | 0 |
| ....................................................................................................TCCCACATGCAGGGTTTGCA............................................................ | 20 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTATT.............................................................................................. | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................ACATCCCTTGCATGGTGGAGGGAAAT............................................................................................... | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAAA.............................................................................................. | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCAT........................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGATCG............................................................................................... | 25 | 3 | 3 | 3.00 | 9 | 0 | 9 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAAT.............................................................................................. | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTTAA............................................................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCAT................................................................................................ | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGGAA................................................................................................ | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAT................................................................................................. | 23 | 2 | 2 | 2.50 | 5 | 5 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGA.................................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGT.................................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGTAAA............................................................................................... | 25 | 3 | 2 | 2.00 | 4 | 4 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGGA................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTGC............................................................. | 21 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAATA.............................................................................................. | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGC............................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCAA........................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTTAT............................................................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCAA................................................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAAAA............................................................................................... | 25 | 3 | 3 | 2.00 | 6 | 6 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAG................................................................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCATT.......................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCAGA.......................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTCCCACATGCAGGGTTTGCAAA.......................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAGT.............................................................................................. | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAAGT............................................................................................. | 27 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTTA............................................................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGGTTT............................................................................................. | 27 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGTTA.............................................................................................. | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................ACATCCCTTGCATGGTGGAGGGTT................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGATA................................................................................................ | 24 | 2 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAGA............................................................................................... | 25 | 3 | 3 | 1.33 | 4 | 4 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTAGAA............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTTC............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTAGCATGGTGGAGGGCG................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGTAGA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTGCAA........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGAA............................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTGA................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAAAT............................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTAAT............................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGAT............................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTGCAT........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................CTCATCCCTTGCATGGTGGAGGGCT................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGG................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAC............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCTCTTGCATGGTGGAGGGCTA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGATAA............................................................................................... | 25 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCTTA............................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAGAT............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGG.................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGTTT.............................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGTA............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAAGA.............................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGATT.............................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGACCG............................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTTCG............................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGTAG................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCTAA............................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTTGA.............................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGCTT................................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTCG............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..............................................................TCCCTTGCATGGTGGAGGGCAAA............................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTCCCACATGCAGGGTTTGCT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................AATCCCTTGCATGGAGGAGGGCGA................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGAGC.............................................................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCAATAT............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCTTACT............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGATAA............................................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGCGTT............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAG..................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGAGA................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGCAGGGC.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGT.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGATAA................................................................................................ | 24 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ....................................................................................................TCCCACATGCAGGGTTTGCTT........................................................... | 21 | 2 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ............................................................AATCCCTTGCATGGTGGAGGGCTA................................................................................................ | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGA................................................................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ....................................................................................................TCCCACATGCAGGGTTTGCAA........................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGGTAC................................................................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGTGGGCAT................................................................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTTCATGGTGGAGGGAAA................................................................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTAGAGGGAAA................................................................................................ | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGTA.................................................................................................. | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCACGGTGGAGGGTA................................................................................................. | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................TCCCTTGCATGGTGGAGGGTAA................................................................................................ | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGTTA................................................................................................. | 23 | 3 | 7 | 0.29 | 2 | 2 | 0 | 0 |
| .................................................................CTTGCATGGTGGAGGGCAA................................................................................................ | 19 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .............................................................ATCCCTTGCATGGTGGAGGGATCG............................................................................................... | 24 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 |
| .................................................................CTTGCATGGTGGAGGGCAAGA.............................................................................................. | 21 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGCTGGAGGGTA................................................................................................. | 23 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGGTAA................................................................................................. | 23 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 |
| ............................................................CATCCCTTGCATGGTGGAGTAT.................................................................................................. | 22 | 3 | 20 | 0.10 | 2 | 2 | 0 | 0 |
|
GGTATCTTTCGTGGATGGACAACACGGTTCTCTCACTTGGGAAGGGACGAGGGAGAGAGTGTAGGGAACGTACCACCTCCCGCTCGAGAGACTTTTGAGGAGGGTGTACGTCCCAAACGTCCTACCACTCGAAGTCGAAAGGAACGAGAGAACACGTACCACCTGTATACGTATCTATGT
*********************************************..((((((..(((..((..(((((((((..((((((................))))))..)))))))))..))..))).)).))))....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:51 PM