ID:rno-mir-187 |
Coordinate:chr18:16390507-16390610 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -40.4 | -40.4 | -40.1 |
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GCAGAAGCCAGCAGCCCACCTAAGGAGGAGCCATGCAAGACAGGCTGCCTGGGCTCACAGGACACAATGCGGATCCTCAGGCTACAACACAGGACCCGGGCGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGCAGGTCTGCAGCAGAGCCTGCCTGGTGGCCCCTGAGAGATTTGACATAGGGCAAAGCACT
*****************************************************************..((((..(((((.((((.(((((((((((.((((..............)))).))))))))))).)))).))))).)))).......*************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTT................................................................. | 24 | 2 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGT.................................................................. | 23 | 1 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCGT..................................................................................................... | 23 | 1 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTAT................................................................ | 25 | 3 | 1 | 7.00 | 7 | 6 | 1 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTTT................................................................ | 25 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGA.................................................................. | 23 | 0 | 1 | 7.00 | 7 | 6 | 0 | 1 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTA................................................................. | 24 | 2 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGTAA................................................................ | 24 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTAA................................................................. | 24 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGT................................................................... | 22 | 1 | 1 | 6.00 | 6 | 5 | 0 | 1 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGG................................................................... | 22 | 0 | 1 | 6.00 | 6 | 1 | 3 | 2 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTAT................................................................. | 24 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGA................................................................... | 22 | 1 | 1 | 4.00 | 4 | 3 | 0 | 1 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGAA................................................................. | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..................................................................................................................ATCGTGTCTTGTGTTGCAGCCGGTCG................................................................ | 26 | 3 | 1 | 4.00 | 4 | 0 | 4 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAA................................................................. | 24 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGTAT................................................................ | 24 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGG................................................................... | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGTA................................................................. | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTA.................................................................. | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAAA................................................................ | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAT................................................................. | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGAAA................................................................. | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCGA..................................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCGTT.................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGTTT................................................................ | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCG...................................................................................................... | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGTAA..................................................................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGT.................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGTAGA............................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGA.................................................................. | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAAT................................................................ | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTTT................................................................. | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................................CTCGTGTCTTGTGTTGCAGCCGCTT................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGTA...................................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTAA................................................................ | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTTG................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCGAAA................................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGAC................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGG......................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTAAA................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGAT................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GCTACAACACAGGACCCGGGCAA..................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGAGTTGCAGCCGG................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGAGA................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACCGGACCCGGGA....................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTAG................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGAA...................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGAT...................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCG.................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGTT.................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................................CTCGTGTCTTGTGTTGCAGCCGTAG................................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGCCTTGTGTTGCAGCCGGTT................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGGGT................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGA....................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................................CTCGTGTCTTGTGTTGCAGCCGGT.................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTGT................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAC................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTTA................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCCTGTCTTGTGTTGCAGCCGGT.................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGTAAG............................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................................CTCGTGTCTTGTGTTGCAGCCGTAT................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGAAA..................................................................................................... | 25 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ................................................................................GCTCCAACACAGGACCCGGGCGT..................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGCTT................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGGTTAT.................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................TCGTGTCTTGTGTTGCAGCCGGAGA................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGTTA................................................................. | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ....................................................................................................................CGTGTCTTGTGTTGCAGCCGAGA................................................................. | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................AGGCTACAACACAGGACCCGGAAA...................................................................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
|
CGTCTTCGGTCGTCGGGTGGATTCCTCCTCGGTACGTTCTGTCCGACGGACCCGAGTGTCCTGTGTTACGCCTAGGAGTCCGATGTTGTGTCCTGGGCCCGCGACGAGACTGGGGAGCACAGAACACAACGTCGGCCTCCCTGCGTCCAGACGTCGTCTCGGACGGACCACCGGGGACTCTCTAAACTGTATCCCGTTTCGTGA
***************************************************..((((..(((((.((((.(((((((((((.((((..............)))).))))))))))).)))).))))).)))).......***************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
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Generated: 04/30/2015 at 05:38 PM