ID:

rno-mir-184

Coordinate:

chr8:97175657-97175733 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.2 -47.0 -47.0

Sense Strand Reads

AGCTTTCATCTGTCCGGGAAAGCATCCTCACAAGTTTTCTGTCTGCCGACCACTTTCCCTTATCAGTTTTCCAGCCAGCTTTGTGACTGTAAATGTTGGACGGAGAACTGATAAGGGTAAGTGACTGGCGCTCACTGCCTTCAGAAGCCCTCGGCTCACCTGCACCTTCTTGTTGGA
***********************************....((..(((((..(((((.((((((((((((((((..(((((((((......)))).)))))..)))))))))))))))).)))))..)))))..))........***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
................................................................................................TGGACGGAGAACTGATAAGGGCCG......................................................... 24 3 1 12.00 12 6 0 6
................................................................................................TGGACGGAGAACTGATAAGGGTT.......................................................... 23 1 1 6.00 6 6 0 0
................................................................................................TGGACGGAGAACTGATAAGGGTTT......................................................... 24 2 1 4.00 4 4 0 0
.................................................................................................GGACGGAGAACTGATAAGGGCCG......................................................... 23 3 2 3.00 6 6 0 0
................................................................................................TGGACGGAGAACTGATAAGGGTAT......................................................... 24 1 1 3.00 3 2 1 0
...............................................................................................TTGGACGGAGAACTGATAAGGGT........................................................... 23 0 1 3.00 3 3 0 0
................................................................................................TGGACGGAGAACTGATAAGGG............................................................ 21 0 1 2.00 2 0 2 0
................................................................................................TGGACGGAGAACTGATAAGGGTA.......................................................... 23 0 1 2.00 2 1 1 0
................................................................................................TGGACGGAGAACTGATAAGTGTAG......................................................... 24 2 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGATAAGGGAG.......................................................... 23 2 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAAATGATAAGGGCG.......................................................... 23 3 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGATAAGGGAA.......................................................... 23 1 1 1.00 1 0 1 0
................................................................................................TGGACGGAGAACTGATAAGGGCG.......................................................... 23 2 1 1.00 1 0 0 1
......................................................................................................GAGAACTGATAAGGGT........................................................... 16 0 1 1.00 1 1 0 0
................................................................................................TCGACGGAGAACTGATAAGGGA........................................................... 22 2 1 1.00 1 0 1 0
................................................................................................TGGACGGAGAACTGATAAGGGA........................................................... 22 1 1 1.00 1 0 1 0
..............................................................................................AATGGACGGAGAACTGATAAGGGTA.......................................................... 25 2 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGATAAGGGTAA......................................................... 24 0 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGATAAGGGT........................................................... 22 0 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGCTAAGGGTAT......................................................... 24 2 1 1.00 1 1 0 0
................................................................................................TGGACGGAGAACTGATAAGGGTTAA........................................................ 25 2 1 1.00 1 1 0 0

Anti-sense strand reads

TCGAAAGTAGACAGGCCCTTTCGTAGGAGTGTTCAAAAGACAGACGGCTGGTGAAAGGGAATAGTCAAAAGGTCGGTCGAAACACTGACATTTACAACCTGCCTCTTGACTATTCCCATTCACTGACCGCGAGTGACGGAAGTCTTCGGGAGCCGAGTGGACGTGGAAGAACAACCT
***********************************....((..(((((..(((((.((((((((((((((((..(((((((((......)))).)))))..)))))))))))))))).)))))..)))))..))........***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:49 PM