ID:

rno-mir-181b-2

 Coordinate:

chr3:23151455-23151542 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.3 -34.3 -34.3 -34.3

Sense Strand Reads

AAGACCCAGGAGATGGAAAAGACCAAGACAATTTCACCAGACGGAAACATTGATGGCTGCACTCAACATTCATTGCTGTCGGTGGGTTTGAATGTCAACCAACTCACTGGTCAATGAATGCAAACTGCGGGCCAAAAAATGCAAGGAAACAAAGCACTCCCAAAAAGTCACCAGAGTGTGGAAGTACT
***********************************..............(((.((((((((.....(((((((((...((((((((.(((.........))))))))))).))))))))).....))))).)))...............))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
................................................................AACATTCATTGCTGTCGGTGGGTTT................................................................................................... 25 0 1 18053.00 18053 18026 20 7
................................................................AACATTCATTGCTGTCGGTGGGTT.................................................................................................... 24 0 2 11230.00 22460 22348 106 6
................................................................AACATTCATTGTTGTCGGTGGGTTT................................................................................................... 25 1 2 5275.00 10550 10481 61 8
................................................................AACATTCATTGCTGTCGGTGGGTTTT.................................................................................................. 26 1 1 5260.00 5260 5237 22 1
................................................................AACATTCATTGCTGTCGGTGGGTAT................................................................................................... 25 1 1 5220.00 5220 5209 10 1
................................................................AACATTCATTGCTGTCGGTGGGT..................................................................................................... 23 0 2 4426.50 8853 8825 20 8
................................................................AACATTCATTGCTGTCGGTGGGTTAT.................................................................................................. 26 2 3 1712.33 5137 5120 17 0
................................................................AACATTCATTGTTGTCGGTGGGTAT................................................................................................... 25 2 2 1552.00 3104 3094 5 5
................................................................AACATTCATTGCTGTCGGTGGGTTA................................................................................................... 25 1 2 1551.00 3102 3093 8 1
................................................................AACATTCATTGCTGTCGGTGGGTAA................................................................................................... 25 2 2 1134.00 2268 2265 3 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTT................................................................................................. 27 2 1 1042.00 1042 1036 6 0
................................................................AACATTCATTGCTGTCGGTGGGA..................................................................................................... 23 1 2 926.00 1852 1848 0 4
................................................................AACATTCATTGCTGTCGGTGGGTA.................................................................................................... 24 1 2 738.00 1476 1475 1 0
.................................................................ACATTCATTGCTGTCGGTGGGTTT................................................................................................... 24 0 1 655.00 655 654 1 0
................................................................AACATTCATTGCTGTCGGTGGGAT.................................................................................................... 24 1 2 605.00 1210 1210 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTA.................................................................................................. 26 1 2 509.50 1019 1015 4 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAT................................................................................................. 27 2 2 429.00 858 855 3 0
................................................................AACATTCATTGCTGTCGGTGGGAA.................................................................................................... 24 2 2 407.50 815 815 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTT.................................................................................................... 23 0 2 376.00 752 752 0 0
................................................................AACATTCATTGCTGTCGGTGGGAAT................................................................................................... 25 2 1 365.00 365 365 0 0
................................................................AACATTCATTGCTGTCGGTGGG...................................................................................................... 22 0 2 345.00 690 683 0 7
................................................................AACATTCATTGCTGTCGGTGGGTTTTA................................................................................................. 27 1 1 242.00 242 242 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTAT................................................................................................ 28 2 1 237.00 237 237 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTTT................................................................................................ 28 3 1 234.00 234 234 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTA.................................................................................................. 26 2 3 206.33 619 613 6 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTT.................................................................................................. 25 1 1 173.00 173 173 0 0
................................................................AACATTCATTGCTGTCGGTGGGATT................................................................................................... 25 1 1 162.00 162 161 1 0
................................................................AACCTTCATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 156.00 156 156 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAA................................................................................................. 27 1 2 155.00 310 310 0 0
.................................................................ACATTCATTGTTGTCGGTGGGTTT................................................................................................... 24 1 2 152.00 304 304 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTAT................................................................................................. 27 3 3 150.33 451 450 1 0
.................................................................ACATTCATTGCTGTCGGTGGGT..................................................................................................... 22 0 2 147.00 294 293 0 1
.................................................................ACATTCATTGCTGTCGGTGGGTAT................................................................................................... 24 1 1 146.00 146 144 1 1
................................................................AACATTCATTGCTGTCGGTGGGTATT.................................................................................................. 26 2 1 142.00 142 142 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGTTT................................................................................................... 26 1 1 142.00 142 142 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTAA................................................................................................. 27 2 2 121.00 242 242 0 0
................................................................AACATTCATTGCTGTCGGTGGGAAA................................................................................................... 25 3 2 120.50 241 241 0 0
................................................................AACATTCATTGCTGTCGGTG........................................................................................................ 20 0 2 119.00 238 222 1 15
..................................................................CATTCATTGCTGTCGGTGGGTTT................................................................................................... 23 0 1 118.00 118 118 0 0
................................................................AACATTCATTGCTGTCGGTGGGGTT................................................................................................... 25 1 1 117.00 117 116 1 0
...................................................................ATTCATTGCTGTCGGTGGGTTT................................................................................................... 22 0 1 96.00 96 95 0 1
................................................................AACATTCATTGTTGTCGGTGGGAAT................................................................................................... 25 3 2 85.00 170 170 0 0
................................................................AACCTTCATTGCTGTCGGTGGGTT.................................................................................................... 24 1 2 83.50 167 165 2 0
...............................................................AAACATTCATTGCTGTCGGTGGGTT.................................................................................................... 25 1 2 80.50 161 161 0 0
................................................................AACATTCATTGATGTCGGTGGGTTT................................................................................................... 25 1 1 72.00 72 72 0 0
................................................................AACATTCATTGCTGTCGGT......................................................................................................... 19 0 2 71.50 143 141 0 2
................................................................AACATTCATTGCTGTCGGTGGGATTT.................................................................................................. 26 2 1 69.00 69 69 0 0
................................................................AACATTCATTGCTGTCGGTGGGGAT................................................................................................... 25 2 1 68.00 68 66 2 0
................................................................AACATTCATTGCTGTCGGTGG....................................................................................................... 21 0 2 64.50 129 128 0 1
................................................................AACATTCATTGCTGTCGGTGGGTAAT.................................................................................................. 26 3 3 64.33 193 193 0 0
................................................................AACATTCATTGCTGTCGGGGGGTTT................................................................................................... 25 1 1 62.00 62 62 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTA................................................................................................... 24 1 2 61.50 123 123 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTAT.................................................................................................. 25 2 3 61.33 184 184 0 0
................................................................AACCTTCATTGCTGTCGGTGGGTTTT.................................................................................................. 26 2 1 57.00 57 57 0 0
................................................................AACATTCATTGCTGTCGGTGGGGT.................................................................................................... 24 1 2 55.50 111 111 0 0
................................................................AACATTCATTGCTGTCGGTGGATTT................................................................................................... 25 1 1 55.00 55 55 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTTA................................................................................................. 27 2 2 55.00 110 110 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTAG.................................................................................................. 26 1 1 54.00 54 54 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTATT................................................................................................. 27 3 3 53.33 160 160 0 0
..................................................................CATTCATTGCTGTCGGTGGGTT.................................................................................................... 22 0 2 53.00 106 106 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTAA................................................................................................ 28 1 1 47.00 47 47 0 0
................................................................AACATTCATTGCTGTCGGTGGGCTT................................................................................................... 25 1 1 46.00 46 46 0 0
................................................................AACATTCATTGCTGTCGGTGGGTATTT................................................................................................. 27 3 1 45.00 45 45 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGT..................................................................................................... 24 1 2 45.00 90 90 0 0
................................................................AACATTCATTGCTGTCGGTGAGTTT................................................................................................... 25 1 1 43.00 43 43 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAAA................................................................................................ 28 1 1 43.00 43 43 0 0
...............................................................AAACATTCATTGTTGTCGGTGGGTTT................................................................................................... 26 2 2 42.50 85 85 0 0
................................................................AACCTTCATTGTTGTCGGTGGGTTT................................................................................................... 25 2 2 42.00 84 84 0 0
................................................................AACATTCATTGCTGTCGGGGGGTT.................................................................................................... 24 1 2 42.00 84 83 0 1
...............................................................AAACATTCATTGCTGTCGGTGGGTAT................................................................................................... 26 2 1 40.00 40 40 0 0
.................................................................ACATTCATTGTTGTCGGTGGGTAT................................................................................................... 24 2 2 40.00 80 80 0 0
................................................................AACATTCATTGCTGTCGGAGGGTTT................................................................................................... 25 1 1 40.00 40 40 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAAT................................................................................................ 28 2 2 39.50 79 79 0 0
...................................................................ATTCATTGCTGTCGGTGGGTTTT.................................................................................................. 23 1 1 39.00 39 39 0 0
...................................................................ATTCATTGCTGTCGGTGGGTT.................................................................................................... 21 0 2 39.00 78 75 0 3
................................................................AACATTCATTGCTGTCGGTGGATT.................................................................................................... 24 1 2 38.50 77 77 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTC.................................................................................................. 26 1 1 38.00 38 38 0 0
................................................................AACCTTCATTGCTGTCGGTGGGT..................................................................................................... 23 1 2 38.00 76 76 0 0
................................................................AACCTTCATTGCTGTCGGTGGGTAT................................................................................................... 25 2 1 38.00 38 38 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTTAT................................................................................................ 28 3 3 37.67 113 113 0 0
................................................................AACATTCATTGCTGTCGGTGGCTTT................................................................................................... 25 1 1 37.00 37 37 0 0
..................................................................CATTCATTGCTGTCGGTGGGTAT................................................................................................... 23 1 1 37.00 37 37 0 0
................................................................AACATTCATTGCTGTCGGTGGCTT.................................................................................................... 24 1 2 36.50 73 73 0 0
................................................................AACATTCATTGCTATCGGTGGGTTT................................................................................................... 25 1 1 36.00 36 36 0 0
................................................................AACATTCATTGATGTCGGTGGGTT.................................................................................................... 24 1 3 35.67 107 99 8 0
.................................................................ACATTCATTGCTGTCGGTGGGTAA................................................................................................... 24 2 2 35.00 70 70 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTTT................................................................................................. 26 2 1 35.00 35 35 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGTTTT.................................................................................................. 27 2 1 33.00 33 33 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTAAA................................................................................................ 28 2 1 33.00 33 33 0 0
................................................................AACATTCATTGCTGTCGGTGGTTTT................................................................................................... 25 1 1 31.00 31 31 0 0
................................................................AACATTCATTGCTGTCGGTGGA...................................................................................................... 22 1 2 30.50 61 57 0 4
.................................................................ACATTCATTGCTGTCGGTGGGTTTA.................................................................................................. 25 1 2 30.00 60 60 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTTTT............................................................................................... 29 3 1 30.00 30 30 0 0
................................................................AACATTCATTGCTCTCGGTGGGTTT................................................................................................... 25 1 1 30.00 30 30 0 0
................................................................AACATTCAATGCTGTCGGTGGGTTT................................................................................................... 25 1 1 29.00 29 29 0 0
................................................................AACATTCATTGTTGTCGGTGGGGTT................................................................................................... 25 2 2 29.00 58 58 0 0
................................................................AACATTCATTGCTATCGGTGGGTT.................................................................................................... 24 1 2 28.00 56 56 0 0
....................................................................TTCATTGCTGTCGGTGGGTTT................................................................................................... 21 0 1 28.00 28 28 0 0
.................................................................ACATTCATTGCTGTCGGTGGGA..................................................................................................... 22 1 2 27.50 55 54 1 0
................................................................AACATTCATTGCTGTCGGTGGGTTC................................................................................................... 25 1 2 27.50 55 55 0 0
................................................................AACATTCATTGCTGTCGGTGGGGTTT.................................................................................................. 26 2 1 27.00 27 27 0 0
................................................................AACATTCATTGCTGTCGGTGGAA..................................................................................................... 23 2 3 27.00 81 81 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTA.................................................................................................... 23 1 2 25.00 50 50 0 0
................................................................AACATTCATTGCTGTCGGTGGGCAT................................................................................................... 25 2 1 25.00 25 25 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTATAT................................................................................................ 28 3 2 25.00 50 50 0 0
................................................................AACATTCATTGCTGTCGGGGGGTAT................................................................................................... 25 2 1 24.00 24 24 0 0
................................................................AACATTCATTGCTGTCGGTGGGTATA.................................................................................................. 26 2 2 24.00 48 48 0 0
................................................................AACATTCATTCCTGTCGGTGGGTTT................................................................................................... 25 1 1 24.00 24 24 0 0
................................................................AACATTCATTGCTGACGGTGGGTTT................................................................................................... 25 1 1 24.00 24 24 0 0
................................................................AACATTCATTGCTGTCGGTGGTTT.................................................................................................... 24 1 2 23.50 47 47 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTTA................................................................................................ 28 2 1 23.00 23 23 0 0
................................................................AACATTCATTGCTGTCGGCGGGTTT................................................................................................... 25 1 1 23.00 23 23 0 0
..................................................................CATTCATTGCTGTCGGTGGGTTTT.................................................................................................. 24 1 1 23.00 23 23 0 0
................................................................AACATTCATTGCTGCCGGTGGGTTT................................................................................................... 25 1 1 23.00 23 23 0 0
................................................................AACATTCATTGCTGTCGGTGGAT..................................................................................................... 23 1 2 22.50 45 45 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTAAT............................................................................................... 29 1 1 22.00 22 22 0 0
.......................................................................ATTGCTGTCGGTGGGTTT................................................................................................... 18 0 1 22.00 22 1 20 1
................................................................AACATTCATTGCTGTCGGTGGGAGT................................................................................................... 25 2 1 21.00 21 21 0 0
.................................................................ACATTCATTGCTGTCGGTGGG...................................................................................................... 21 0 2 20.50 41 41 0 0
................................................................ACCATTCATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 20.00 20 20 0 0
................................................................AACATTCATTGCTGTCGGTGGCTTTT.................................................................................................. 26 2 1 20.00 20 20 0 0
................................................................AACATTCATTGCTGTCGGTGGGTGA................................................................................................... 25 2 2 20.00 40 40 0 0
................................................................AACATTCATTGCTGTCGGGGGGTTTT.................................................................................................. 26 2 1 20.00 20 20 0 0
................................................................AACATTCATTGCTCTCGGTGGGTT.................................................................................................... 24 1 2 19.00 38 38 0 0
................................................................AACATTCATTGCTGTCGGTGGGG..................................................................................................... 23 1 2 19.00 38 38 0 0
................................................................AAACTTCATTGCTGTCGGTGGGTTT................................................................................................... 25 2 1 19.00 19 19 0 0
................................................................AACATTCATTGTTGTCGGTGGGATT................................................................................................... 25 2 2 19.00 38 38 0 0
................................................................AACATTCATTGCTGTCGGTGGTT..................................................................................................... 23 1 2 19.00 38 38 0 0
..................................................................CATTCATTGTTGTCGGTGGGTTT................................................................................................... 23 1 2 19.00 38 38 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTAAT................................................................................................ 28 3 2 19.00 38 38 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTATA................................................................................................. 27 2 2 19.00 38 38 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTAGT................................................................................................. 27 2 1 19.00 19 19 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTTAA................................................................................................ 28 2 2 18.50 37 37 0 0
...................................................................ATTCATTGCTGTCGGTGGGT..................................................................................................... 20 0 2 18.50 37 37 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTAT................................................................................................. 26 2 2 18.50 37 37 0 0
................................................................AACATTCATTGCTGTCGGTGGTAT.................................................................................................... 24 2 2 18.00 36 35 1 0
..................................................................CATTCATTGTTGTCGGTGGGTAT................................................................................................... 23 2 2 18.00 36 36 0 0
.................................................................ACATTCATTGCTGTCGGTGGGAT.................................................................................................... 23 1 2 17.50 35 35 0 0
................................................................AACATTCATTGCTGTCGGTGGT...................................................................................................... 22 1 2 17.50 35 35 0 0
................................................................AACATTCATTCCTGTCGGTGGGTT.................................................................................................... 24 1 2 17.50 35 35 0 0
..................................................................CATTCATTGCTGTCGGTGGGT..................................................................................................... 21 0 2 17.50 35 35 0 0
................................................................AACATTCATTGCTGTCGGAGGGTT.................................................................................................... 24 1 2 17.50 35 35 0 0
................................................................AACATTCATTCCTGTCGGTGGGTTTT.................................................................................................. 26 2 1 17.00 17 17 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTATT................................................................................................ 28 3 2 17.00 34 34 0 0
................................................................AACATTCCTTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 17.00 17 17 0 0
...................................................................ATTCATTGCTGTCGGTGGGTAT................................................................................................... 22 1 1 17.00 17 17 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTTAT............................................................................................... 29 2 1 17.00 17 17 0 0
...................................................................ATTCATTGCTGTCGGTGGGTTATAAC............................................................................................... 26 3 1 17.00 17 17 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTGA................................................................................................. 27 0 1 17.00 17 17 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTTA................................................................................................. 26 1 1 17.00 17 17 0 0
...................................................................ATTCATTGTTGTCGGTGGGTTT................................................................................................... 22 1 2 17.00 34 32 0 2
................................................................AACCTTCATTGTTGTCGGTGGGTAT................................................................................................... 25 3 2 16.50 33 33 0 0
................................................................AACATTCATTGCTGTCGGTGGCT..................................................................................................... 23 1 2 16.50 33 33 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTAG.................................................................................................. 26 2 2 16.50 33 33 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTCT................................................................................................. 27 2 1 16.00 16 16 0 0
................................................................AACATTCATTGCTGTCGGTGGGATTTT................................................................................................. 27 3 1 16.00 16 15 1 0
................................................................AACATTCATTGCTGTCGGTGGCTAT................................................................................................... 25 2 1 16.00 16 16 0 0
................................................................AACATTAATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 16.00 16 16 0 0
................................................................CACCTTCATTGCTGTCGGTGGGTT.................................................................................................... 24 2 2 16.00 32 31 1 0
................................................................AACATTCATTGCTGTCGGAGGGTAT................................................................................................... 25 2 1 16.00 16 16 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTATAA................................................................................................ 28 2 1 16.00 16 16 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTATT............................................................................................... 29 2 1 16.00 16 16 0 0
................................................................AACATTCCTTGCTGTCGGTGGGTT.................................................................................................... 24 1 2 15.50 31 31 0 0
................................................................AACATTCATTGCTGTCGGTGAGTT.................................................................................................... 24 1 2 15.00 30 30 0 0
................................................................AACATTCATTGATGTCGGTGGGT..................................................................................................... 23 1 3 15.00 45 45 0 0
................................................................AACATTCATTGTTATCGGTGGGTTT................................................................................................... 25 2 2 15.00 30 29 1 0
................................................................AACATTCATTGCTGTCAGTGGGTTT................................................................................................... 25 1 1 15.00 15 15 0 0
................................................................AACCTTCATTGCTGTCGGTGGGTTAT.................................................................................................. 26 3 3 15.00 45 44 1 0
................................................................AACATTCATTGCTGTCGGTGGGTTAGA................................................................................................. 27 1 1 15.00 15 15 0 0
................................................................AACATTCATTGATGTCGGTGGGTAT................................................................................................... 25 2 1 15.00 15 15 0 0
................................................................AACATTCATTGTTGTCGGTGGGGAT................................................................................................... 25 3 2 15.00 30 30 0 0
................................................................AACATTCATTGCTGTCGGTGGGCT.................................................................................................... 24 1 2 15.00 30 30 0 0
................................................................AACATTCATTGCTGTCGGTGGAAT.................................................................................................... 24 2 2 14.50 29 29 0 0
................................................................AACATTCATTGCTGTCGGCGGGTT.................................................................................................... 24 1 2 14.50 29 28 1 0
................................................................AACATTCATTGCTGTCGGTGGGTATAA................................................................................................. 27 2 2 14.00 28 28 0 0
................................................................AACATTCATTGCTGTCGGTGGATTTT.................................................................................................. 26 2 1 14.00 14 14 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTTAAT............................................................................................... 29 2 1 14.00 14 14 0 0
................................................................AACATTCATTGCTATCGGTGGGTAT................................................................................................... 25 2 1 14.00 14 14 0 0
................................................................AACATTCATTGCTGTCGGTGGGTCT................................................................................................... 25 1 1 14.00 14 14 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTGT................................................................................................. 27 2 1 14.00 14 14 0 0
................................................................AACATTCATTACTGTCGGTGGGTT.................................................................................................... 24 1 2 13.50 27 27 0 0
................................................................AACATTCATTGATGTCGGTGGGTTTT.................................................................................................. 26 2 2 13.50 27 27 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTAC.................................................................................................. 26 2 2 13.50 27 27 0 0
................................................................AACATTCATTGCTATCGGTGGGT..................................................................................................... 23 1 2 13.50 27 27 0 0
................................................................AACATTCATTGCTGTCGGTGA....................................................................................................... 21 1 2 13.50 27 27 0 0
................................................................AACATTCATTGCTGTCGGTGGGATA................................................................................................... 25 2 2 13.50 27 27 0 0
................................................................AACATTCATTGCTGTCGGTGGGAATT.................................................................................................. 26 3 1 13.00 13 13 0 0
................................................................CACCTTCATTGCTGTCGGTGGGTTT................................................................................................... 25 2 1 13.00 13 13 0 0
................................................................AACATTCATTGCTGTCGGAGGGTTTT.................................................................................................. 26 2 1 13.00 13 13 0 0
................................................................AAACTTCATTGCTGTCGGTGGGTT.................................................................................................... 24 2 2 13.00 26 26 0 0
....................................................................TTCATTGCTGTCGGTGGGTT.................................................................................................... 20 0 2 13.00 26 25 0 1
................................................................AACATTCATTGCTGTCGGTGTGTTT................................................................................................... 25 1 1 13.00 13 13 0 0
................................................................AACCTTCATTGCTGTCGGTGGGTTA................................................................................................... 25 2 2 13.00 26 26 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTGT................................................................................................. 27 1 1 13.00 13 13 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGA..................................................................................................... 24 2 2 13.00 26 26 0 0
................................................................AAGCTTCATTGCTGTCGGTGGGTTT................................................................................................... 25 2 1 13.00 13 13 0 0
................................................................AACATTCATTACTGTCGGTGGGTTT................................................................................................... 25 1 1 13.00 13 13 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTGA................................................................................................. 27 1 1 13.00 13 13 0 0
................................................................AACATTCATTGCTGTCGGTGGGTAC................................................................................................... 25 2 2 12.50 25 25 0 0
................................................................AACATTCATTGTTGTCGGTGGCTTT................................................................................................... 25 2 2 12.50 25 25 0 0
................................................................AACATTCAATGCTGTCGGTGGGTT.................................................................................................... 24 1 2 12.50 25 25 0 0
................................................................AACATTCATTGCTGTCGGTGGGTATAT................................................................................................. 27 3 2 12.00 24 24 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTATA................................................................................................ 28 2 1 12.00 12 12 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTG.................................................................................................. 26 0 1 12.00 12 12 0 0
................................................................AACATTCATTGATGTCGGTGGGCTT................................................................................................... 25 2 1 12.00 12 12 0 0
................................................................AACATTCATTGCTTTCGGTGGGTTT................................................................................................... 25 1 1 12.00 12 12 0 0
................................................................AAAATTCATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 12.00 12 12 0 0
...............................................................AAACATTCATTGTTGTCGGTGGGTAT................................................................................................... 26 3 2 12.00 24 24 0 0
................................................................AACATTCATTGCTGTCGGTGT....................................................................................................... 21 1 2 12.00 24 23 1 0
................................................................AACTTTCATTGCTGTCGGTGGGTTTT.................................................................................................. 26 2 1 12.00 12 12 0 0
................................................................AACATTCATTGCTGACGGTGGGTT.................................................................................................... 24 1 2 12.00 24 24 0 0
................................................................AACATTCATTGCTGTCGGTGGGTAAG.................................................................................................. 26 2 1 11.00 11 11 0 0
................................................................CACCTTCATTGCTGTCGGTGGGTTTT.................................................................................................. 26 3 1 11.00 11 11 0 0
................................................................AACATTCATTGTTGTCGGGGGGTTT................................................................................................... 25 2 2 11.00 22 22 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTAGA................................................................................................. 27 2 1 11.00 11 11 0 0
................................................................AACATTCATCGCTGTCGGTGGGTTT................................................................................................... 25 1 1 11.00 11 11 0 0
................................................................AACATTCATTGCTGTCGGTGGATAT................................................................................................... 25 2 1 11.00 11 11 0 0
................................................................AACATTCATTGCTGTCGGCGGGTAT................................................................................................... 25 2 1 11.00 11 10 1 0
................................................................AACATTCATTGCTGTCGGTGGGTAAGT................................................................................................. 27 3 1 11.00 11 11 0 0
...................................................................ATTCATTGCTGTCGGTGGGTTAT.................................................................................................. 23 2 4 10.75 43 43 0 0
................................................................AACATTCATTGCTGTCGGTGGGATAT.................................................................................................. 26 3 3 10.67 32 32 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGTTAT.................................................................................................. 27 3 3 10.67 32 32 0 0
................................................................AACATTCCTTGTTGTCGGTGGGTTT................................................................................................... 25 2 2 10.50 21 20 1 0
................................................................AACATTCATTGCTGTCGGTGGGAG.................................................................................................... 24 2 2 10.50 21 20 0 1
................................................................AACATTCATTGTTCTCGGTGGGTTT................................................................................................... 25 2 2 10.50 21 21 0 0
................................................................AACATTCATTGCTGTCGGTGGGC..................................................................................................... 23 1 2 10.50 21 21 0 0
................................................................AACATTCATTGCTGTCGGTGGGATTA.................................................................................................. 26 2 2 10.50 21 21 0 0
................................................................AAAATTCATTGCTGTCGGTGGGTT.................................................................................................... 24 1 2 10.50 21 21 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTAAAA................................................................................................ 28 2 2 10.00 20 20 0 0
................................................................AACATTCATTGCCGTCGGTGGGTTT................................................................................................... 25 1 1 10.00 10 10 0 0
....................................................................TTCATTGCTGTCGGTGGGTTTT.................................................................................................. 22 1 1 10.00 10 10 0 0
................................................................AACATTCATTCCTGTCGGTGGGTAT................................................................................................... 25 2 1 10.00 10 10 0 0
................................................................AACATTCATTGCTGTCGGTGGTTTTT.................................................................................................. 26 2 1 10.00 10 10 0 0
................................................................AACATTCATTGCTATCGGTGGGTTTT.................................................................................................. 26 2 1 10.00 10 10 0 0
................................................................AACATTCATTGCTGTCGGGGGGT..................................................................................................... 23 1 2 10.00 20 20 0 0
................................................................AACATTCATTGCTGTCGGTGGGGAA................................................................................................... 25 3 2 10.00 20 20 0 0
................................................................CACATTCATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 10.00 10 10 0 0
................................................................AACATTCATTGTTGTCGGTGAGTTT................................................................................................... 25 2 2 10.00 20 20 0 0
................................................................AACATTCATTGTTGTCGGTGGATTT................................................................................................... 25 2 3 10.00 30 30 0 0
..................................................................CATTCATTGCTGTCGGTGGGTAA................................................................................................... 23 2 2 10.00 20 20 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTAGT................................................................................................. 27 3 2 9.50 19 19 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGTAA................................................................................................... 26 3 2 9.50 19 19 0 0
................................................................AACATTCATTGCTGCCGGTGGGTT.................................................................................................... 24 1 2 9.50 19 19 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTC.................................................................................................. 26 2 2 9.50 19 19 0 0
................................................................AACCTTCATTGCTGTCGGTGGGA..................................................................................................... 23 2 2 9.00 18 18 0 0
................................................................AACATTCATTCCTGTCGGTGGGT..................................................................................................... 23 1 2 9.00 18 18 0 0
...................................................................ATTCATTGCTGTCGGTGGGTTA................................................................................................... 22 1 2 9.00 18 18 0 0
................................................................AACATTCATTGCTGTCGGTGGTTAT................................................................................................... 25 2 1 9.00 9 9 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTAG.................................................................................................. 25 1 1 9.00 9 9 0 0
................................................................AACATTCCTTGCTGTCGGTGGGTAT................................................................................................... 25 2 1 9.00 9 9 0 0
................................................................AACATTCATTGCTGTCGGTGGGTATTA................................................................................................. 27 2 1 9.00 9 9 0 0
................................................................AACATTCATTGCTGTCGGTCG....................................................................................................... 21 1 2 9.00 18 0 18 0
...............................................................AAACATTCATTGCTGTCGGTGGGTTA................................................................................................... 26 2 2 9.00 18 18 0 0
...................................................................ATTCATTGCTGTCGGTGGGTAAC.................................................................................................. 23 3 2 9.00 18 18 0 0
................................................................AACATTCATTGCTGTCCGTGGGTTT................................................................................................... 25 1 1 9.00 9 9 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAAAA............................................................................................... 29 2 1 9.00 9 9 0 0
.................................................................ACATTCATTGCTGTCGGTGGGATT................................................................................................... 24 1 1 9.00 9 9 0 0
.................................................................ACATTCATTGCTGTCGGTGGGAAT................................................................................................... 24 2 1 9.00 9 9 0 0
....................................................................TTCATTGTTGTCGGTGGGTTT................................................................................................... 21 1 2 8.50 17 17 0 0
................................................................AACATTCATTGTTGTCGGTGGTTTT................................................................................................... 25 2 2 8.50 17 17 0 0
.................................................................ACATTCATTGCTGTCGGTGGGAA.................................................................................................... 23 2 2 8.50 17 17 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTAG................................................................................................. 27 2 2 8.50 17 17 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTAA................................................................................................. 26 1 2 8.50 17 17 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTTTAT............................................................................................... 29 3 2 8.50 17 17 0 0
................................................................AACATTCATTGCTGTCGGTGGAAA.................................................................................................... 24 3 6 8.33 50 50 0 0
................................................................AACATTCATTGTTGTCGGTGGGTATA.................................................................................................. 26 3 3 8.33 25 25 0 0
................................................................AACATTCATTGTTGTCGGTGGGTAAGA................................................................................................. 27 3 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGACGGTGGGTTTT.................................................................................................. 26 2 1 8.00 8 8 0 0
................................................................AACATTTATTGCTGTCGGTGGGTTT................................................................................................... 25 1 1 8.00 8 8 0 0
................................................................AACCTTCATTGATGTCGGTGGGTTT................................................................................................... 25 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGTGGGTGT................................................................................................... 25 1 1 8.00 8 8 0 0
...................................................................ATTCATTGCTGTCGGTGGGTTTTT................................................................................................. 24 2 1 8.00 8 8 0 0
................................................................AACATTCATTGTTGTCGGAGGGTTT................................................................................................... 25 2 2 8.00 16 15 1 0
................................................................AACCTTCATTGCTGTCGGTGGGTTTTT................................................................................................. 27 3 1 8.00 8 8 0 0
................................................................AAACTTCATTGCTGTCGGTGGGTTTT.................................................................................................. 26 3 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGTGGGTTTTAG................................................................................................ 28 2 1 8.00 8 8 0 0
.................................................................ACATTCATTGCTGTCGGTGGGTTTTAT................................................................................................ 27 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTCTCGGTGGGTAT................................................................................................... 25 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGTGGTA..................................................................................................... 23 2 2 8.00 16 16 0 0
................................................................AACATTCATTGCTGTCGGTGGGTAAGA................................................................................................. 27 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGCGGGT..................................................................................................... 23 1 2 8.00 16 16 0 0
................................................................AACATTCATTGTTGTCGGTGGGTTTG.................................................................................................. 26 1 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGTGAGTTTT.................................................................................................. 26 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGCGGGTTTT.................................................................................................. 26 2 1 8.00 8 8 0 0
................................................................AACATTCATTGCTGTCGGGGGGTTAT.................................................................................................. 26 3 3 7.67 23 22 1 0
..................................................................CATTCATTGCTGTCGGTGGGTTAT.................................................................................................. 24 2 3 7.67 23 23 0 0
...............................................................AAACATTCATTGCTGTCGGTGGGTA.................................................................................................... 25 2 2 7.50 15 15 0 0
................................................................AACATTCATTGCTGTCGGTGAGT..................................................................................................... 23 1 2 7.50 15 15 0 0
................................................................AACATTCATTGCCGTCGGTGGGTT.................................................................................................... 24 1 2 7.50 15 15 0 0
................................................................AACATTCATTGCTGTCGGTGGGGA.................................................................................................... 24 2 2 7.50 15 15 0 0
................................................................AACATTAATTGCTGTCGGTGGGTT.................................................................................................... 24 1 2 7.50 15 15 0 0
................................................................AAACTTCATTGTTGTCGGTGGGTTT................................................................................................... 25 3 2 7.50 15 15 0 0
................................................................AACATTCATTGCTGACGGTGGGT..................................................................................................... 23 1 2 7.50 15 15 0 0
.................................................................ACATTCATTGTTGTCGGTGGGTTTA.................................................................................................. 25 2 3 7.33 22 22 0 0
................................................................AACATTCATTGTTGACGGTGGGTTT................................................................................................... 25 2 2 7.00 14 14 0 0
..............................................................AAAACATTCATTGCTGTCGGTGGGTTT................................................................................................... 27 2 1 7.00 7 7 0 0
................................................................AACATTCATTGTTGTCGGTGGGCAT................................................................................................... 25 3 2 7.00 14 14 0 0
................................................................AACATTCATTACTGTCGGTGGGTAT................................................................................................... 25 2 1 7.00 7 7 0 0
................................................................AACATTCATTGCTGTCGGCGGGTTA................................................................................................... 25 2 2 7.00 14 14 0 0
................................................................AACATTCATTGCTGTCGGGGGGA..................................................................................................... 23 2 2 7.00 14 14 0 0
....................................................................................................AACTCACTGGTCAATGAATGCCA................................................................. 23 1 1 7.00 7 7 0 0

Anti-sense strand reads

TTCTGGGTCCTCTACCTTTTCTGGTTCTGTTAAAGTGGTCTGCCTTTGTAACTACCGACGTGAGTTGTAAGTAACGACAGCCACCCAAACTTACAGTTGGTTGAGTGACCAGTTACTTACGTTTGACGCCCGGTTTTTTACGTTCCTTTGTTTCGTGAGGGTTTTTCAGTGGTCTCACACCTTCATGA
***********************************..............(((.((((((((.....(((((((((...((((((((.(((.........))))))))))).))))))))).....))))).)))...............))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:43 PM