ID:

rno-mir-181b-1

 Coordinate:

chr13:54952903-54953012 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.4 -40.3 -40.3
mature
  1. chr13:54952938-54952961 +
  2. chr3:23151469-23151492 +
star

Sense Strand Reads

CGTTTGCTGAAGACAAAACCGCAAGGCAGGACCGGACAGGATTCTCTCCGCCTGTGCAGAGATGATGTTTACAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGAAAAGCTCACTGAACAATGAATGCAACTGTGGCCCCGCTTTTTGCTGTCACAATCAACAGACGTTCCCTCCCTAAGAGAGGTCCTGGAGG
***********************************..((.(((.((((.((....)).)))).))).))......(((((((.....(((((((((...((((((((((...((....))...)))))))))).)))))))))....)))))))..((.....))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
.....................................................................................AACATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 0 2 11230.00 22460 22348 106 6
.....................................................................................AACATTCATTGCTGTCGGTGGGT...................................................................................................... 23 0 2 4426.50 8853 8825 20 8
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAT................................................................................................... 26 2 3 1712.33 5137 5120 17 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTA.................................................................................................... 25 1 2 1551.00 3102 3093 8 1
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAA................................................................................................... 26 1 1 1487.00 1487 1487 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAA.................................................................................................... 25 2 2 1134.00 2268 2265 3 0
.....................................................................................AACATTCATTGCTGTCGGTGGGA...................................................................................................... 23 1 2 926.00 1852 1848 0 4
.....................................................................................AACATTCATTGCTGTCGGTGGGTA..................................................................................................... 24 1 2 738.00 1476 1475 1 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAT..................................................................................................... 24 1 2 605.00 1210 1210 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAA................................................................................................... 26 2 2 519.00 1038 1038 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTA................................................................................................... 26 1 2 509.50 1019 1015 4 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAT.................................................................................................. 27 2 2 429.00 858 855 3 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAA..................................................................................................... 24 2 2 407.50 815 815 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTT..................................................................................................... 23 0 2 376.00 752 752 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGG....................................................................................................... 22 0 2 345.00 690 683 0 7
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAT.................................................................................................. 27 2 1 219.00 219 219 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTA................................................................................................... 26 2 3 206.33 619 613 6 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAA................................................................................................... 26 2 1 185.00 185 185 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAA.................................................................................................. 27 1 1 159.00 159 159 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAA.................................................................................................. 27 1 2 155.00 310 310 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTAT.................................................................................................. 27 3 3 150.33 451 450 1 0
......................................................................................ACATTCATTGCTGTCGGTGGGT...................................................................................................... 22 0 2 147.00 294 293 0 1
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAAA.................................................................................................. 27 2 1 127.00 127 127 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAG.................................................................................................... 25 1 1 124.00 124 114 10 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTAA.................................................................................................. 27 2 2 121.00 242 242 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAAA.................................................................................................... 25 3 2 120.50 241 241 0 0
.....................................................................................AACATTCATTGCTGTCGGTG......................................................................................................... 20 0 2 119.00 238 222 1 15
......................................................................................ACATTCATTGCTGTCGGTGGGTTAA................................................................................................... 25 1 1 89.00 89 89 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 83.50 167 165 2 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTT..................................................................................................... 25 1 2 80.50 161 161 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTAAA................................................................................................... 26 3 2 75.50 151 151 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTG.................................................................................................... 25 0 1 73.00 73 73 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGA................................................................................................... 26 0 1 73.00 73 73 0 0
.....................................................................................AACATTCATTGCTGTCGGT.......................................................................................................... 19 0 2 71.50 143 141 0 2
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAAT.................................................................................................. 27 3 2 65.50 131 131 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTGA................................................................................................... 26 1 2 64.50 129 129 0 0
.....................................................................................AACATTCATTGCTGTCGGTGG........................................................................................................ 21 0 2 64.50 129 128 0 1
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAT................................................................................................... 26 3 3 64.33 193 193 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTA.................................................................................................... 24 1 2 61.50 123 123 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTAT................................................................................................... 25 2 3 61.33 184 184 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGT..................................................................................................... 24 1 2 55.50 111 111 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTATT.................................................................................................. 27 3 3 53.33 160 160 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTT..................................................................................................... 22 0 2 53.00 106 106 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGT...................................................................................................... 24 1 2 45.00 90 90 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGT................................................................................................... 26 1 2 43.00 86 86 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTT..................................................................................................... 24 1 2 42.00 84 83 0 1
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAAT................................................................................................. 28 2 2 39.50 79 79 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTT..................................................................................................... 21 0 2 39.00 78 75 0 3
.....................................................................................AACATTCATTGCTGTCGGTGGATT..................................................................................................... 24 1 2 38.50 77 77 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAAA.................................................................................................. 27 2 1 38.00 38 38 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAAT................................................................................................. 28 2 1 38.00 38 38 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 38.00 76 76 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCTT..................................................................................................... 24 1 2 36.50 73 73 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGTT..................................................................................................... 24 1 3 35.67 107 99 8 0
......................................................................................ACATTCATTGCTGTCGGTGGGTAA.................................................................................................... 24 2 2 35.00 70 70 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGA....................................................................................................... 22 1 2 30.50 61 57 0 4
......................................................................................ACATTCATTGCTGTCGGTGGGTTTA................................................................................................... 25 1 2 30.00 60 60 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGTT..................................................................................................... 24 1 2 28.00 56 56 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGA...................................................................................................... 22 1 2 27.50 55 54 1 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTC.................................................................................................... 25 1 2 27.50 55 55 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAAAA................................................................................................... 26 3 1 27.00 27 27 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAA...................................................................................................... 23 2 3 27.00 81 81 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTA..................................................................................................... 23 1 2 25.00 50 50 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTATAT................................................................................................. 28 3 2 25.00 50 50 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTATA................................................................................................... 26 2 2 24.00 48 48 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTTT..................................................................................................... 24 1 2 23.50 47 47 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAGA................................................................................................... 26 1 1 23.00 23 23 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAT...................................................................................................... 23 1 2 22.50 45 45 0 0
......................................................................................ACATTCATTGCTGTCGGTGGG....................................................................................................... 21 0 2 20.50 41 41 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTGA.................................................................................................... 25 2 2 20.00 40 40 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGG...................................................................................................... 23 1 2 19.00 38 38 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTATA.................................................................................................. 27 2 2 19.00 38 38 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTAAT................................................................................................. 28 3 2 19.00 38 38 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTT...................................................................................................... 23 1 2 19.00 38 38 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGTT..................................................................................................... 24 1 2 19.00 38 38 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTTAT.................................................................................................. 26 2 2 18.50 37 37 0 0
........................................................................................ATTCATTGCTGTCGGTGGGT...................................................................................................... 20 0 2 18.50 37 37 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTAT..................................................................................................... 24 2 2 18.00 36 35 1 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAAT.................................................................................................. 27 3 1 18.00 18 18 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTTAAC................................................................................................. 25 1 1 18.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGTT..................................................................................................... 24 1 2 17.50 35 35 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGT....................................................................................................... 22 1 2 17.50 35 35 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGT...................................................................................................... 21 0 2 17.50 35 35 0 0
.....................................................................................AACATTCATTCCTGTCGGTGGGTT..................................................................................................... 24 1 2 17.50 35 35 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGAT..................................................................................................... 23 1 2 17.50 35 35 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTATT................................................................................................. 28 3 2 17.00 34 34 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTAAA.................................................................................................. 26 1 1 17.00 17 17 0 0
......................................................................................ACATTCATTGTTGTCGGTGGGTTAA................................................................................................... 25 2 2 16.50 33 33 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCT...................................................................................................... 23 1 2 16.50 33 33 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTAAC.................................................................................................. 24 2 1 16.00 16 16 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTAAAA.................................................................................................. 27 3 1 16.00 16 16 0 0
.....................................................................................CACCTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 2 2 16.00 32 31 1 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTTAA................................................................................................... 27 2 1 16.00 16 16 0 0
.....................................................................................AACATTCCTTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 15.50 31 31 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTTAT................................................................................................... 26 3 3 15.00 45 44 1 0
.....................................................................................AACATTCATTGCTGTCGGTGAGTT..................................................................................................... 24 1 2 15.00 30 30 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTAAA................................................................................................... 25 2 1 15.00 15 15 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGCT..................................................................................................... 24 1 2 15.00 30 30 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGT...................................................................................................... 23 1 3 15.00 45 45 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGTT..................................................................................................... 24 1 2 14.50 29 28 1 0
.....................................................................................AACATTCATTGCTGTCGGTGGAAT..................................................................................................... 24 2 2 14.50 29 29 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTAA................................................................................................... 23 1 1 14.00 14 14 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTTAA................................................................................................... 26 2 1 14.00 14 14 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAGT................................................................................................... 26 2 2 14.00 28 28 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTATAA.................................................................................................. 27 2 2 14.00 28 28 0 0
.....................................................................................AACATTCATTACTGTCGGTGGGTT..................................................................................................... 24 1 2 13.50 27 27 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAC................................................................................................... 26 2 2 13.50 27 27 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGT...................................................................................................... 23 1 2 13.50 27 27 0 0
.....................................................................................AACATTCATTGCTGTCGGTGA........................................................................................................ 21 1 2 13.50 27 27 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGATA.................................................................................................... 25 2 2 13.50 27 27 0 0
.....................................................................................AAACTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 2 2 13.00 26 26 0 0
.........................................................................................TTCATTGCTGTCGGTGGGTT..................................................................................................... 20 0 2 13.00 26 25 0 1
....................................................................................AAACATTCATTGCTGTCGGTGGGA...................................................................................................... 24 2 2 13.00 26 26 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTTA.................................................................................................... 25 2 2 13.00 26 26 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTAGA................................................................................................... 26 2 2 13.00 26 26 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAC.................................................................................................... 25 2 2 12.50 25 25 0 0
.....................................................................................AACATTCAATGCTGTCGGTGGGTT..................................................................................................... 24 1 2 12.50 25 25 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTATAT.................................................................................................. 27 3 2 12.00 24 24 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAATT................................................................................................. 28 3 1 12.00 12 12 0 0
.....................................................................................AACATTCATTGCTGACGGTGGGTT..................................................................................................... 24 1 2 12.00 24 24 0 0
.....................................................................................AACATTCATTGCTGTCGGTGT........................................................................................................ 21 1 2 12.00 24 23 1 0
........................................................................................ATTCATTGCTGTCGGTGGGTATAAC................................................................................................. 25 2 1 12.00 12 12 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTAT................................................................................................... 23 2 4 10.75 43 43 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTTAT................................................................................................... 27 3 3 10.67 32 32 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGATAT................................................................................................... 26 3 3 10.67 32 32 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAG..................................................................................................... 24 2 2 10.50 21 20 0 1
.....................................................................................AACATTCATTGCTGTCGGTGGGC...................................................................................................... 23 1 2 10.50 21 21 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGATTA................................................................................................... 26 2 2 10.50 21 21 0 0
.....................................................................................AAAATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 10.50 21 21 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATTAA................................................................................................... 26 2 1 10.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAAA................................................................................................. 28 2 2 10.00 20 20 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGAA.................................................................................................... 25 3 2 10.00 20 20 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAAAT................................................................................................. 28 3 1 10.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGT...................................................................................................... 23 1 2 10.00 20 20 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTGAT.................................................................................................. 27 2 2 10.00 20 20 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAAG.................................................................................................... 25 2 1 10.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGAT.................................................................................................. 27 1 1 10.00 10 10 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTAA.................................................................................................... 23 2 2 10.00 20 20 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTAA.................................................................................................... 26 3 2 9.50 19 19 0 0
.....................................................................................AACATTCATTGCTGCCGGTGGGTT..................................................................................................... 24 1 2 9.50 19 19 0 0
.....................................................................................AACATTCATTCCTGTCGGTGGGT...................................................................................................... 23 1 2 9.00 18 18 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGA...................................................................................................... 23 2 2 9.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAG.................................................................................................. 27 2 1 9.00 9 9 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTA.................................................................................................... 22 1 2 9.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAGAT.................................................................................................. 27 2 1 9.00 9 9 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTAAT.................................................................................................. 26 2 1 9.00 9 9 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTTA.................................................................................................... 26 2 2 9.00 18 18 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTAAC................................................................................................... 23 3 2 9.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCGGTCG........................................................................................................ 21 1 2 9.00 18 0 18 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTTAA.................................................................................................. 26 1 2 8.50 17 17 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAG.................................................................................................. 27 2 2 8.50 17 17 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGAA..................................................................................................... 23 2 2 8.50 17 17 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAAA..................................................................................................... 24 3 6 8.33 50 50 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTATA................................................................................................... 26 3 3 8.33 25 25 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTGAA.................................................................................................. 27 1 1 8.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGAAC................................................................................................. 28 0 1 8.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGT...................................................................................................... 23 1 2 8.00 16 16 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTA...................................................................................................... 23 2 2 8.00 16 16 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTAA................................................................................................... 26 2 1 8.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGAA.................................................................................................. 27 0 1 8.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGATAA................................................................................................... 26 2 1 8.00 8 8 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTAT................................................................................................... 24 2 3 7.67 23 23 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTAT................................................................................................... 26 3 3 7.67 23 22 1 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTA..................................................................................................... 25 2 2 7.50 15 15 0 0
.....................................................................................AACATTAATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 7.50 15 15 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGA..................................................................................................... 24 2 2 7.50 15 15 0 0
.....................................................................................AACATTCATTGCTGACGGTGGGT...................................................................................................... 23 1 2 7.50 15 15 0 0
.....................................................................................AACATTCATTGCCGTCGGTGGGTT..................................................................................................... 24 1 2 7.50 15 15 0 0
.....................................................................................AACATTCATTGCTGTCGGTGAGT...................................................................................................... 23 1 2 7.50 15 15 0 0
......................................................................................ACATTCATTGTTGTCGGTGGGTTTA................................................................................................... 25 2 3 7.33 22 22 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAAGT................................................................................................. 28 3 1 7.00 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGTAT................................................................................................. 28 2 1 7.00 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGTTA.................................................................................................... 25 2 2 7.00 14 14 0 0
.........................................................................................TTCATTGCTGTCGGTGGGTCG.................................................................................................... 21 1 1 7.00 7 0 7 0
.....................................................................................AACATTCATTGCTGTCGGAGGGT...................................................................................................... 23 1 2 7.00 14 14 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGA...................................................................................................... 23 2 2 7.00 14 14 0 0
.....................................................................................ACCATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 7.00 14 14 0 0
.....................................................................................AACATTCATTACTGTCGGTGGGT...................................................................................................... 23 1 2 7.00 14 14 0 0
.....................................................................................CACCTTCATTGCTGTCGGTGGGT...................................................................................................... 23 2 2 6.50 13 13 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATTA.................................................................................................... 25 2 2 6.50 13 13 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTATTT................................................................................................ 29 3 2 6.50 13 13 0 0
.....................................................................................AACATTCCTTGCTGTCGGTGGGT...................................................................................................... 23 1 2 6.50 13 12 1 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTA.................................................................................................... 23 1 2 6.50 13 13 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGTTA.................................................................................................... 25 2 3 6.33 19 19 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCTAA.................................................................................................... 25 3 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTCT................................................................................................... 26 2 3 6.00 18 17 1 0
........................................................................................ATTCATTGCTGTCGGTGGGTAAAAC................................................................................................. 25 2 1 6.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTCA................................................................................................... 26 1 1 6.00 6 6 0 0
........................................................................................ATTCATTGCTGTCGGTGGGA...................................................................................................... 20 1 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATTAT................................................................................................... 26 3 3 6.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAC.................................................................................................. 27 2 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTGTT..................................................................................................... 24 1 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAAAT................................................................................................. 28 3 1 6.00 6 6 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGT...................................................................................................... 23 1 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGTTAT................................................................................................... 26 3 3 6.00 18 18 0 0
.....................................................................................AACATTCATTGCTGTCAGTGGGTT..................................................................................................... 24 1 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTAA................................................................................................... 26 2 1 6.00 6 6 0 0
.....................................................................................AAGCTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 2 2 6.00 12 12 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGTTA.................................................................................................... 25 2 2 5.50 11 11 0 0
......................................................................................ACATTCATTGCTGTCGGTG......................................................................................................... 19 0 2 5.50 11 11 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTTAT.................................................................................................. 24 2 2 5.50 11 11 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAC................................................................................................... 26 3 2 5.50 11 11 0 0
......................................................................................ACATTCATTGTTGTCGGTGGGTTTAT.................................................................................................. 26 3 3 5.00 15 15 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGGTT..................................................................................................... 24 1 2 5.00 10 10 0 0
.....................................................................................AACTTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 5.00 10 10 0 0
.....................................................................................TACCTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 2 2 5.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGAAA................................................................................................. 28 1 1 5.00 5 5 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGTTAA................................................................................................... 26 2 1 5.00 5 5 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTAA................................................................................................... 24 1 1 5.00 5 5 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTC..................................................................................................... 24 1 2 5.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGATGGGTT..................................................................................................... 24 1 2 5.00 10 10 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGCAA.................................................................................................... 25 3 2 5.00 10 10 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGTTAA................................................................................................... 26 2 1 5.00 5 5 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTAT................................................................................................... 26 3 3 5.00 15 15 0 0
.....................................................................................AACATTTATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 4.50 9 9 0 0
.....................................................................................CACATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTGTAGGTGGGTT..................................................................................................... 24 1 2 4.50 9 9 0 0
......................................................................................ACATTCATTGTTGTCGGTGGGTTGA................................................................................................... 25 1 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCA...................................................................................................... 23 2 2 4.50 9 9 0 0
.....................................................................................TACATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGTTA.................................................................................................... 25 2 2 4.50 9 9 0 0
.....................................................................................AACATCCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGCA..................................................................................................... 24 2 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTAA.................................................................................................... 25 3 2 4.50 9 9 0 0
.....................................................................................AACATTCAATGCTGTCGGTGGGT...................................................................................................... 23 1 2 4.50 9 9 0 0
.....................................................................................AATCTTCATTGCTGTCGGTGGGTT..................................................................................................... 24 2 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGT...................................................................................................... 23 1 2 4.50 9 9 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAAAA................................................................................................. 28 3 3 4.33 13 13 0 0
.....................................................................................AACATTCATTCCTGTCGGTGGGTTAT................................................................................................... 26 3 3 4.33 13 13 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGTA..................................................................................................... 24 2 3 4.33 13 13 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTAAAC................................................................................................. 25 1 1 4.00 4 4 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCTTAA................................................................................................... 26 2 1 4.00 4 4 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTGA................................................................................................... 25 0 1 4.00 4 4 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGTTTT................................................................................................ 29 3 1 4.00 4 4 0 0
.....................................................................................ACCATTCATTGCTGTCGGTGGGTTAA................................................................................................... 26 2 1 4.00 4 4 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAAGA................................................................................................... 26 2 1 4.00 4 4 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTTA................................................................................................... 24 1 2 4.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATAA.................................................................................................... 25 3 2 4.00 8 8 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTTTA................................................................................................... 23 1 2 4.00 8 8 0 0
.....................................................................................AACATTCACTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 4.00 8 8 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGTT..................................................................................................... 24 1 2 4.00 8 8 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTTTA................................................................................................... 26 2 2 4.00 8 8 0 0
..................................................................................AAAAACATTCATTGCTGTCGGTGGGTT..................................................................................................... 27 2 1 4.00 4 4 0 0
.........................................................................................TTCATTGCTGTCGGTGGGTAA.................................................................................................... 21 2 2 4.00 8 8 0 0
.........................................................................................TTCATTGCTGTCGGTGGGT...................................................................................................... 19 0 2 4.00 8 8 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTAAT.................................................................................................. 25 2 1 4.00 4 4 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTA..................................................................................................... 24 2 2 4.00 8 8 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTA..................................................................................................... 21 1 2 4.00 8 8 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTATAA.................................................................................................. 27 3 2 4.00 8 8 0 0
......................................................................................ACATTCATTGTTGTCGGTGGGTTAAA.................................................................................................. 26 2 1 4.00 4 4 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTGT................................................................................................... 24 1 2 4.00 8 8 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATTTA................................................................................................... 26 2 2 4.00 8 8 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGAT..................................................................................................... 24 2 2 4.00 8 8 0 0
.....................................................................................AACATTCATTGGTGTCGGTGGGTT..................................................................................................... 24 1 3 3.67 11 11 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGTTTA................................................................................................... 26 2 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGTA..................................................................................................... 24 2 2 3.50 7 7 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGTTTA................................................................................................... 27 2 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCCGTGGGTT..................................................................................................... 24 1 2 3.50 7 7 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTGT................................................................................................... 25 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGC....................................................................................................... 22 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTTGGTGGGTT..................................................................................................... 24 1 2 3.50 7 7 0 0
.....................................................................................AACAATCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGCCGGTGGGT...................................................................................................... 23 1 2 3.50 7 7 0 0
.....................................................................................AACATTAATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTG..................................................................................................... 24 1 2 3.50 7 7 0 0
.....................................................................................AACATTCACTGCTGTCGGTGGGT...................................................................................................... 23 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTA.................................................................................................... 25 2 2 3.50 7 7 0 0
.....................................................................................AACATTCATCGCTGTCGGTGGGTT..................................................................................................... 24 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGTT.................................................................................................. 27 2 2 3.50 7 7 0 0
.....................................................................................AAAATTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 3.50 7 7 0 0
.....................................................................................ACCATTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTA.................................................................................................... 25 2 2 3.50 7 7 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAGA.................................................................................................... 25 3 4 3.25 13 13 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGCAAA................................................................................................... 26 3 1 3.00 3 3 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGTA.................................................................................................. 27 1 1 3.00 3 3 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGAA..................................................................................................... 24 3 2 3.00 6 5 1 0
.....................................................................................AACATTCATTCCTGTCGGTGGGTTAA................................................................................................... 26 2 1 3.00 3 3 0 0
.....................................................................................AACATTGATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 3.00 6 6 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTA..................................................................................................... 24 2 2 3.00 6 6 0 0
.....................................................................................AACCTTCATTGCTGTCGGTGGGTAA.................................................................................................... 25 3 2 3.00 6 6 0 0
.....................................................................................AACATTCATTACTGTCGGTGGGA...................................................................................................... 23 2 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTGAACT................................................................................................ 29 0 1 3.00 3 3 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGAT..................................................................................................... 24 2 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCAGTGGGT...................................................................................................... 23 1 2 3.00 6 6 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTAA.................................................................................................... 22 2 2 3.00 6 6 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTAAT................................................................................................... 25 3 3 3.00 9 9 0 0
.....................................................................................AAACTTCATTGCTGTCGGTGGGTTAA................................................................................................... 26 3 1 3.00 3 3 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGG....................................................................................................... 23 1 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGTTAT................................................................................................... 26 3 3 3.00 9 9 0 0
.....................................................................................AACATTCATCGCTGTCGGTGGGTTAA................................................................................................... 26 2 1 3.00 3 3 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGTT..................................................................................................... 24 1 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGTA..................................................................................................... 24 2 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAATTT................................................................................................ 29 3 1 3.00 3 3 0 0
...................................................................................AAAACATTCATTGCTGTCGGTGGGTT..................................................................................................... 26 2 2 3.00 6 6 0 0
.....................................................................................AAACTTCATTGCTGTCGGTGGGT...................................................................................................... 23 2 2 3.00 6 6 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCTTAT................................................................................................... 26 3 3 3.00 9 9 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAGATTT................................................................................................ 29 3 1 3.00 3 3 0 0
.......................................................................................CATTCATTGCTGTCGGTGGGTTAAA.................................................................................................. 25 1 1 3.00 3 3 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAGT................................................................................................. 28 3 2 3.00 6 6 0 0
....................................................................................AAACATTCATTGCTGTCGGTGGGAT..................................................................................................... 25 2 2 3.00 6 6 0 0
........................................................................................ATTCATTGCTGTCGGTGGG....................................................................................................... 19 0 2 3.00 6 6 0 0

Anti-sense strand reads

GCAAACGACTTCTGTTTTGGCGTTCCGTCCTGGCCTGTCCTAAGAGAGGCGGACACGTCTCTACTACAAATGTTTCCAGTGTTAGTTGTAAGTAACGACAGCCACCCAACTTGACACATCTTTTCGAGTGACTTGTTACTTACGTTGACACCGGGGCGAAAAACGACAGTGTTAGTTGTCTGCAAGGGAGGGATTCTCTCCAGGACCTCC
***********************************..((.(((.((((.((....)).)))).))).))......(((((((.....(((((((((...((((((((((...((....))...)))))))))).)))))))))....)))))))..((.....))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:35 PM