ID:

rno-mir-17-1

 Coordinate:

chr15:100179879-100179962 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.7 -44.4 -44.3
mature
  1. chr15:100179892-100179914 +
  2. chrX:140117936-140117958 -
star

Sense Strand Reads

GAAGAGGCCATCGTCTTGGGAGGGACTGAAGCCGGCCGGCTGACCGACCGGTCAGGATAATGTCAAAGTGCTTACAGTGCAGGTAGTGGTGTGTGCATCTACTGCAGTGAAGGCACTTGTGGCATTGTGCTGACAGCTGCCTCGAGAGGGGCTGGGCTGGGCGCCGTGGGGAGGGCCTGCTGGC
************************************************..(((((.(((((((((((((((((.((.(((((.(((((.......)).)))))))).)).)))))))).))))))))).)))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
...............................................................CAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 0 2 18934.00 37868 37539 129 200
...............................................................CAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 24 0 1 6211.00 6211 6109 64 38
...............................................................CAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 23 1 2 6012.00 12024 11930 68 26
...............................................................CAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 23 1 2 5951.50 11903 11883 8 12
...............................................................CAAAGTGCTTACAGTGCAGGTA................................................................................................... 22 0 2 2560.00 5120 5077 28 15
...............................................................CAAAGTGCTTACAGTGCAGGTAGA................................................................................................. 24 1 2 2040.00 4080 4042 16 22
...............................................................CAAAGTGCTTACAGTGCAGGTAAA................................................................................................. 24 2 2 1171.50 2343 2336 3 4
................................................................AAAGTGCTTACAGTGCAGGTAG.................................................................................................. 22 0 2 1030.00 2060 2052 7 1
...............................................................CAAAGTGCTTACAGTGCAGGT.................................................................................................... 21 0 2 876.00 1752 1718 33 1
...............................................................CAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 24 1 1 735.00 735 734 1 0
................................................................AAAGTGCTTACAGTGCAGGTAGT................................................................................................. 23 0 1 448.00 448 445 3 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGG.............................................................. 22 0 1 426.00 426 415 11 0
...............................................................CAAAGTGCTTACAGTGCAGGTATT................................................................................................. 24 1 1 385.00 385 382 3 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAA................................................................................................ 25 2 2 324.50 649 640 4 5
....................................................................................................ACTGCAGTGAAGGCACTTGTGGA............................................................. 23 1 1 321.00 321 320 1 0
................................................................AAAGTGCTTACAGTGCAGGTAA.................................................................................................. 22 1 2 269.50 539 539 0 0
................................................................AAAGTGCTTACAGTGCAGGTAT.................................................................................................. 22 1 2 246.50 493 490 3 0
................................................................AAAGTGCTTACAGTGCAGGTAGA................................................................................................. 23 1 2 211.50 423 422 1 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGC............................................................. 23 0 1 207.00 207 203 4 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 24 1 2 192.00 384 377 2 5
...............................................................CAAAGTGCTTACAGTGCAGGTAGTA................................................................................................ 25 1 1 178.00 178 177 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAA............................................................................................... 26 2 1 158.00 158 158 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAAAA................................................................................................ 25 3 3 156.33 469 464 0 5
....................................................................................................ACTGCAGTGAAGGCACTTGTGGT............................................................. 23 1 1 148.00 148 148 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 137.00 274 273 0 1
...................................................................................................TACTGCAGTGAAGGCACTTGTGG.............................................................. 23 0 1 124.00 124 123 1 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 24 1 2 122.00 244 243 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTT................................................................................................... 22 1 2 114.50 229 227 2 0
...............................................................CAAAGTGCTTACAGTGCAGGTCG.................................................................................................. 23 1 2 106.50 213 210 0 3
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAA............................................................ 24 1 1 103.00 103 101 2 0
................................................................AAAGTGCTTACAGTGCAGGTA................................................................................................... 21 0 2 100.00 200 199 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTT................................................................................................ 25 1 2 99.50 199 196 3 0
...............................................................CAAAGTGCTTACAGTGCAGGTATA................................................................................................. 24 2 2 98.50 197 191 0 6
...............................................................CAAAGTGCTTACAGTGCAGGTTA.................................................................................................. 23 2 2 96.00 192 192 0 0
.................................................................AAGTGCTTACAGTGCAGGTAG.................................................................................................. 21 0 2 90.00 180 175 5 0
..............................................................TCAAAGTGCTTACAGTGCAGGTA................................................................................................... 23 0 2 80.00 160 160 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 24 1 2 72.00 144 144 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 25 1 1 72.00 72 70 2 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCA............................................................ 24 0 1 72.00 72 72 0 0
...............................................................CAAAGTGCTTACAGTGCAGG..................................................................................................... 20 0 2 71.00 142 135 7 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAT............................................................................................... 26 2 2 63.00 126 125 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTTAT................................................................................................. 24 2 1 61.00 61 61 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 24 2 2 61.00 122 122 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAA............................................................................................... 26 3 3 61.00 183 181 2 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 24 2 2 60.00 120 119 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTGG.................................................................................................. 23 1 2 55.00 110 109 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTGA.................................................................................................. 23 2 2 55.00 110 110 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTTT.................................................................................................. 23 2 5 53.20 266 266 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGA.............................................................. 22 1 1 48.00 48 46 2 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 24 0 2 48.00 96 96 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCAT........................................................... 25 0 1 46.00 46 46 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAT.................................................................................................. 23 2 2 45.00 90 89 0 1
...............................................................CAAAGTGCTTAAAGTGCAGGTAG.................................................................................................. 23 1 2 44.50 89 88 0 1
...............................................................CAAAGTGCTTCCAGTGCAGGTAG.................................................................................................. 23 1 2 44.50 89 87 1 1
..............................................................ACAAAGTGCTTACAGTGCAGGTA................................................................................................... 23 1 2 44.50 89 88 0 1
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAAA........................................................... 25 2 1 44.00 44 42 2 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAG................................................................................................ 25 1 1 42.00 42 42 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATTA................................................................................................ 25 2 1 42.00 42 42 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTTTT................................................................................................. 24 2 1 42.00 42 42 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTCA.................................................................................................. 23 2 2 41.50 83 83 0 0
...................................................................GTGCTTACAGTGCAGGTAG.................................................................................................. 19 0 2 41.50 83 80 3 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAT............................................................ 24 2 1 41.00 41 41 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTCGT................................................................................................. 24 1 1 40.00 40 36 2 2
...............................................................CAACGTGCTTACAGTGCAGGTAGT................................................................................................. 24 1 1 40.00 40 39 0 1
...................................................................................................TACTGCAGTGAAGGCACTTGTGGT............................................................. 24 1 1 38.00 38 38 0 0
................................................................AAAGTGCTTACAGTGCAGGTAAT................................................................................................. 23 1 1 37.00 37 37 0 0
................................................................AAAGTGCTTACAGTGCAGGT.................................................................................................... 20 0 2 36.00 72 71 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTTG.................................................................................................. 23 1 2 35.50 71 70 0 1
................................................................AAAGTGCTTACAGTGCAGGTAGAA................................................................................................ 24 2 2 35.00 70 70 0 0
................................................................AAAGTGCTTACAGTGCAGGTAAA................................................................................................. 23 2 3 34.00 102 102 0 0
.................................................................AAGTGCTTACAGTGCAGGTAGT................................................................................................. 22 0 1 33.00 33 32 1 0
...............................................................CAAAGTGCTTACAATGCAGGTAG.................................................................................................. 23 1 2 33.00 66 65 0 1
...................................................................................................TACTGCAGTGAAGGCACTTGTGGA............................................................. 24 1 1 33.00 33 33 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATTT................................................................................................ 25 2 2 32.50 65 64 1 0
...............................................................CAACGTGCTTACAGTGCAGGTAA.................................................................................................. 23 2 3 32.33 97 97 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTAG.................................................................................................. 23 1 3 32.33 97 96 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTAAAG................................................................................................ 25 2 1 32.00 32 32 0 0
.................................................................AAGTGCTTACAGTGCAGGTAT.................................................................................................. 21 1 2 32.00 64 64 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATAA................................................................................................ 25 3 7 31.43 220 220 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAC.................................................................................................. 23 1 2 31.00 62 61 0 1
..............................................................ACAAAGTGCTTACAGTGCAGGTAGA................................................................................................. 25 2 2 28.50 57 57 0 0
...............................................................CAAAGTGCTTACAGCGCAGGTAG.................................................................................................. 23 1 2 27.50 55 54 0 1
...............................................................CACCGTGCTTACAGTGCAGGTAG.................................................................................................. 23 2 2 27.50 55 55 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGT.............................................................. 22 1 1 27.00 27 26 1 0
...............................................................TAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 3 25.33 76 76 0 0
...............................................................CAAAGTGCTTACAGTGCAG...................................................................................................... 19 0 2 24.50 49 43 6 0
...............................................................CAAAGTGCTTACAGTGCAGGCAG.................................................................................................. 23 1 2 24.50 49 47 0 2
...............................................................CAAAGTGCTTACAGTGCAGGTAGAGA............................................................................................... 26 2 1 24.00 24 24 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAA................................................................................................... 22 1 2 23.50 47 47 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTTAA................................................................................................. 24 3 5 23.40 117 117 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCAT........................................................... 24 0 1 23.00 23 23 0 0
...............................................................CAAAGTGCTTACACTGCAGGTAG.................................................................................................. 23 1 2 23.00 46 45 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTCT.................................................................................................. 23 2 4 22.50 90 89 0 1
.............................................................AACAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 25 2 2 22.50 45 45 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCAA........................................................... 25 1 1 22.00 22 22 0 0
...............................................................CAAAGTGCTTCCAGTGCAGGTAGT................................................................................................. 24 1 1 22.00 22 22 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGTAA........................................................... 25 2 1 22.00 22 22 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCT............................................................ 24 1 1 22.00 22 21 1 0
................................................................AAAGTGCTTACAGTGCAGGTATT................................................................................................. 23 1 1 22.00 22 22 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGT.................................................................................................. 23 2 4 21.25 85 85 0 0
...............................................................CAAAGTGCTTACAGAGCAGGTAG.................................................................................................. 23 1 2 21.00 42 42 0 0
...............................................................AAACGTGCTTACAGTGCAGGTAG.................................................................................................. 23 2 2 21.00 42 42 0 0
...............................................................CAAAGCGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 20.50 41 41 0 0
...............................................................CAAAGTGCTTATAGTGCAGGTAG.................................................................................................. 23 1 4 20.25 81 79 1 1
...................................................................GTGCTTACAGTGCAGGTAGT................................................................................................. 20 0 1 20.00 20 18 2 0
...............................................................CAAAGTGCTTACAGTGCAGGA.................................................................................................... 21 1 2 20.00 40 39 1 0
..................................................................AGTGCTTACAGTGCAGGTAG.................................................................................................. 20 0 2 19.50 39 39 0 0
...............................................................CAAAGTGCTTGCAGTGCAGGTAG.................................................................................................. 23 1 2 19.00 38 35 1 2
...............................................................CAAAGTGCTTACAGTGCAGGTAAG................................................................................................. 24 2 3 18.67 56 56 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGG................................................................................................. 24 1 2 18.50 37 37 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGAC................................................................................................ 24 2 2 18.50 37 37 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGT.................................................................................................... 22 0 2 18.50 37 37 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 25 0 1 18.00 18 18 0 0
...............................................................CAAAGTGCTTACAGTGAAGGTAG.................................................................................................. 23 1 2 18.00 36 35 1 0
.................................................................AAGTGCTTACAGTGCAGGTAA.................................................................................................. 21 1 3 18.00 54 54 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGTAT........................................................... 25 1 1 18.00 18 18 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAAT.............................................................................................. 27 3 1 18.00 18 17 1 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGTT............................................................ 24 2 1 17.00 17 16 0 1
....................................................................................................ACTGCAGTGAAGGCACTTGTGGTA............................................................ 24 1 1 17.00 17 17 0 0
...............................................................CAAAGTGCTTACAGAGCAGGTAGT................................................................................................. 24 1 1 17.00 17 17 0 0
...............................................................CAAAGTGCTTAAAGTGCAGGTAA.................................................................................................. 23 2 2 17.00 34 34 0 0
...............................................................CAAAGTGCTTAAAGTGCAGGTAT.................................................................................................. 23 2 3 16.33 49 49 0 0
.................................................................AAGTGCTTACAGTGCAGGTA................................................................................................... 20 0 2 15.50 31 30 1 0
...............................................................CAAAGTGCTTACAGTGCAGGGAG.................................................................................................. 23 1 2 15.50 31 29 2 0
...............................................................CAACGTGCTTACAGTGCAGGTA................................................................................................... 22 1 2 15.50 31 31 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTG................................................................................................... 22 1 2 15.50 31 31 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAA.................................................................................................. 23 2 3 15.33 46 46 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTCGA................................................................................................. 24 2 2 15.00 30 29 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAAT.............................................................................................. 27 2 1 15.00 15 15 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTTA............................................................................................... 26 2 2 15.00 30 30 0 0
...................................................................................................TACTGCAGTGAAGGCACTTGTGT.............................................................. 23 1 1 15.00 15 15 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAAAGA............................................................................................... 26 3 1 15.00 15 15 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAT.................................................................................................. 23 2 2 15.00 30 30 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAGA................................................................................................. 24 2 2 14.50 29 29 0 0
...............................................................CAAAGTGCTTCCAGTGCAGGTAA.................................................................................................. 23 2 2 14.50 29 29 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTC................................................................................................... 22 1 2 14.50 29 28 0 1
...............................................................CAAAGTGCTTACAGTGCAGGAAG.................................................................................................. 23 1 2 14.50 29 28 0 1
...............................................................CAAAGTGCTTAAAGTGCAGGTAGT................................................................................................. 24 1 1 14.00 14 14 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAG............................................................................................... 26 2 1 14.00 14 14 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTAA.................................................................................................. 23 2 3 13.00 39 39 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTAGT................................................................................................. 24 1 1 13.00 13 13 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 13.00 26 26 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAATAA............................................................................................... 26 3 1 13.00 13 13 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGAA............................................................. 23 2 1 13.00 13 13 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGT.................................................................................................... 22 1 2 13.00 26 26 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGGT................................................................................................. 24 1 1 13.00 13 13 0 0
...............................................................CAAAGTGCTTACAGCGCAGGTAT.................................................................................................. 23 2 2 12.00 24 24 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCTAT.......................................................... 25 2 1 12.00 12 12 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTAT.................................................................................................. 23 2 3 12.00 36 35 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTAATA................................................................................................ 25 2 1 12.00 12 12 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGGA................................................................................................ 25 2 2 11.50 23 23 0 0
...............................................................CAAAGTGCTTACAGTGCAAGTAG.................................................................................................. 23 1 2 11.50 23 23 0 0
...............................................................CAAAGTGCTTAAAGTGCAGGTA................................................................................................... 22 1 2 11.50 23 23 0 0
.....................................................................GCTTACAGTGCAGGTAG.................................................................................................. 17 0 2 11.00 22 20 2 0
....................................................................TGCTTACAGTGCAGGTAG.................................................................................................. 18 0 2 11.00 22 20 2 0
...............................................................CAAAGTGCTTACAGTGCATGTAG.................................................................................................. 23 1 2 11.00 22 22 0 0
...............................................................AAACGTGCTTACAGTGCAGGTAGT................................................................................................. 24 2 1 11.00 11 11 0 0
...............................................................CAAAGTGCTTCCAGTGCAGGTAT.................................................................................................. 23 2 3 11.00 33 33 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTT................................................................................................... 23 1 2 11.00 22 22 0 0
...............................................................TAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 24 1 2 11.00 22 22 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGTA................................................................................................ 24 1 1 11.00 11 11 0 0
...................................................................................................TACTGCAGTGAAGGCACTTGTGGAA............................................................ 25 1 1 11.00 11 11 0 0
...............................................................CAAAGTGATTACAGTGCAGGTAG.................................................................................................. 23 1 2 11.00 22 22 0 0
...............................................................CAAAGTGCTTACAATGCAGGTAGT................................................................................................. 24 1 1 11.00 11 11 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATAG................................................................................................ 25 2 1 10.00 10 10 0 0
...............................................................CAAAGAGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 10.00 20 20 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAATT................................................................................................ 25 2 2 10.00 20 20 0 0
...............................................................CAGCGTGCTTACAGTGCAGGTAG.................................................................................................. 23 2 3 10.00 30 30 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAAT........................................................... 25 1 1 10.00 10 10 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTTGT................................................................................................. 24 1 1 10.00 10 10 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAAA.............................................................................................. 27 3 1 10.00 10 10 0 0
...............................................................CAAAGTGCTTACAGTGCAGGCAGT................................................................................................. 24 1 1 10.00 10 10 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTG............................................................... 21 0 1 10.00 10 9 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTTTT.............................................................................................. 27 2 2 9.50 19 18 1 0
...............................................................CAAAGTGCTTATAGTGCAGGTAGT................................................................................................. 24 1 2 9.50 19 18 1 0
.................................................................AAGTGCTTACAGTGCAGGTAGA................................................................................................. 22 1 2 9.50 19 19 0 0
...............................................................CAAAGTGCTTACAGAGCAGGTAA.................................................................................................. 23 2 2 9.50 19 19 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAAA................................................................................................. 25 3 3 9.33 28 28 0 0
...............................................................CAAAGTGCTTACAGCGCAGGTAA.................................................................................................. 23 2 2 9.00 18 18 0 0
...............................................................CAAAGTGCTTACAGTGAAGGTAGT................................................................................................. 24 1 1 9.00 9 9 0 0
...............................................................CAAAGTGCTTTCAGTGCAGGTAG.................................................................................................. 23 1 2 9.00 18 18 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTTAT.............................................................................................. 27 2 1 9.00 9 9 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATTAA............................................................................................... 26 3 1 9.00 9 9 0 0
...............................................................CACCGTGCTTACAGTGCAGGTAGT................................................................................................. 24 2 1 9.00 9 9 0 0
...............................................................TAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 23 2 3 8.67 26 25 0 1
..............................................................TCAAAGTGCTTACAGTGCAGGTAAA................................................................................................. 25 2 2 8.50 17 16 0 1
...............................................................CAAAGTGCTTACAGAGCAGGTAT.................................................................................................. 23 2 2 8.50 17 17 0 0
............................................................AAACAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 26 3 2 8.50 17 17 0 0
...............................................................CAAAGTGCTTACAGTCCAGGTAG.................................................................................................. 23 1 2 8.50 17 17 0 0
...............................................................CAAAGCGCTTACAGTGCAGGTAT.................................................................................................. 23 2 2 8.00 16 16 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGAT................................................................................................. 24 2 1 8.00 8 8 0 0
...............................................................CAATGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 8.00 16 16 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCTAT.......................................................... 26 2 1 8.00 8 7 1 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGG.............................................................. 21 0 1 8.00 8 7 1 0
...............................................................CAAGGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 8.00 16 16 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 25 1 1 8.00 8 8 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGT................................................................ 20 0 1 8.00 8 6 2 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAAG........................................................... 25 2 1 8.00 8 8 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAG.............................................................. 22 1 1 8.00 8 8 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGAG............................................................ 24 2 1 8.00 8 8 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCAA........................................................... 24 1 1 8.00 8 8 0 0
...............................................................CAAAGTGCTTACAGTGCAGGGAGT................................................................................................. 24 1 1 8.00 8 8 0 0
...............................................................CAAAGTGCTTAAAGTGCAGGTAC.................................................................................................. 23 2 2 8.00 16 16 0 0
...............................................................CAGAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 8.00 16 14 1 1
...............................................................CAAAGTGATTACAGTGCAGGTAT.................................................................................................. 23 2 2 8.00 16 16 0 0
...............................................................CAAAGTGCTTACAGTGTAGGTAG.................................................................................................. 23 1 2 8.00 16 16 0 0
...............................................................CCAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 7.50 15 15 0 0
...........................................................AAAACAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 27 3 2 7.50 15 15 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATTAT............................................................................................... 26 3 2 7.50 15 15 0 0
...............................................................CACAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 7.50 15 14 0 1
................................................................AAAGTGCTTACAGCGCAGGTAG.................................................................................................. 22 1 2 7.50 15 15 0 0
.................................................................AAGTGCTTACAGTGCAGGT.................................................................................................... 19 0 2 7.00 14 13 1 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCAAT.......................................................... 26 1 1 7.00 7 7 0 0
...............................................................CAAAGTGCTTGCAGTGCAGGTAGT................................................................................................. 24 1 1 7.00 7 6 0 1
...............................................................CAAAGTGCTTGCAGTGCAGGTAA.................................................................................................. 23 2 2 7.00 14 14 0 0
...............................................................CAAAGTGCTTACAGTGCCGGTAG.................................................................................................. 23 1 2 7.00 14 14 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCTTT.......................................................... 25 1 1 7.00 7 7 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCAAA.......................................................... 26 2 1 7.00 7 7 0 0
...............................................................CAAAGTGATTACAGTGCAGGTAA.................................................................................................. 23 2 2 7.00 14 14 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGC............................................................. 22 0 1 7.00 7 6 1 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCTA........................................................... 25 2 1 7.00 7 7 0 0
...............................................................CAAAGAGCTTACAGTGCAGGTAGT................................................................................................. 24 1 1 7.00 7 7 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCTTT.......................................................... 26 1 1 7.00 7 7 0 0
...............................................................CAAAGCGCTTACAGTGCAGGTAA.................................................................................................. 23 2 2 7.00 14 14 0 0
...............................................................CAAAGTCCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 7.00 14 14 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 25 2 1 7.00 7 7 0 0
...............................................................CAAAGTGCTTTCAGTGCAGGTAGT................................................................................................. 24 1 1 7.00 7 7 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 24 1 1 7.00 7 6 1 0
...............................................................CAAAGTGCTTATAGTGCAGGTAT.................................................................................................. 23 2 4 6.75 27 27 0 0
...............................................................TAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 23 2 6 6.67 40 39 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTAAAGT............................................................................................... 26 3 2 6.50 13 13 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGGA................................................................................................. 24 2 2 6.50 13 13 0 0
...............................................................CAAAGTGCTTCCAGTGCAGGTA................................................................................................... 22 1 2 6.50 13 13 0 0
...............................................................CAAAGTGCTTATAGTGCAGGTAA.................................................................................................. 23 2 4 6.50 26 26 0 0
...............................................................CAAAGTGCTTAAAGTGCAGGTAGA................................................................................................. 24 2 2 6.50 13 13 0 0
................................................................AAAGTGCTTACAGTGCAGGTAC.................................................................................................. 22 1 2 6.50 13 13 0 0
...............................................................CAAAGTGCTTACAGGGCAGGTAG.................................................................................................. 23 1 2 6.50 13 11 0 2
...............................................................CAAAGTGCTTACATTGCAGGTAG.................................................................................................. 23 1 2 6.50 13 13 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAAA................................................................................................. 24 3 3 6.33 19 19 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCTT........................................................... 25 1 1 6.00 6 6 0 0
...............................................................CGAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 6.00 12 12 0 0
...................................................................................................TACTGCAGTGAAGGCACTTGTGA.............................................................. 23 1 1 6.00 6 6 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTCAT................................................................................................. 24 2 1 6.00 6 6 0 0
................................................................AAAGTGCTTACCGTGCAGGTAG.................................................................................................. 22 1 2 6.00 12 12 0 0
................................................................AAAGTGCTTACAGTGCCGGTAG.................................................................................................. 22 1 2 6.00 12 12 0 0
....................................................................TGCTTACAGTGCAGGTAGT................................................................................................. 19 0 1 6.00 6 6 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGTAA............................................................................................... 25 2 1 6.00 6 6 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGTA............................................................ 23 1 1 6.00 6 6 0 0
...............................................................CAAAGTGCTTACAATGCAGGTAT.................................................................................................. 23 2 3 6.00 18 18 0 0
...............................................................CAAAGTGCTTAGAGTGCAGGTAG.................................................................................................. 23 1 2 6.00 12 11 0 1
..........................................ACCGACCGGTCAGGATAATGTCG....................................................................................................................... 23 1 1 6.00 6 0 0 6
...................................................................................................TACTGCAGTGAAGGCACTTGTG............................................................... 22 0 1 6.00 6 6 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 24 2 1 6.00 6 6 0 0
....................................................................................................ACTGCAGTGAAGGCCCTTGTGGC............................................................. 23 1 1 6.00 6 6 0 0
...............................................................CAACGTGCTTAAAGTGCAGGTAG.................................................................................................. 23 2 2 6.00 12 12 0 0
...............................................................CAAAGTGCTTACAGTACAGGTAG.................................................................................................. 23 1 2 6.00 12 12 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTAGA................................................................................................. 24 2 3 5.67 17 17 0 0
...............................................................CAAAGTGCTTACACTGCAGGTAA.................................................................................................. 23 2 3 5.67 17 17 0 0
................................................................AAAGTGCTTACAGAGCAGGTAG.................................................................................................. 22 1 2 5.50 11 11 0 0
...............................................................CAAAATGCTTACAGTGCAGGTAG.................................................................................................. 23 1 2 5.50 11 11 0 0
...............................................................CAAAGTGCATACAGTGCAGGTAG.................................................................................................. 23 1 2 5.50 11 11 0 0
...............................................................CAAAGTGCCTACAGTGCAGGTAG.................................................................................................. 23 1 2 5.50 11 11 0 0
...............................................................CAAAGTGCTTACAGTGCAGCTAG.................................................................................................. 23 1 2 5.50 11 11 0 0
...................................................................GTGCTTACAGTGCAGGTAT.................................................................................................. 19 1 4 5.50 22 19 3 0
...............................................................CAAAGTGCTTACAGTGCAGGTTGA................................................................................................. 24 2 2 5.50 11 11 0 0
...............................................................CAAAGTGCTTACAATGCAGGTAA.................................................................................................. 23 2 3 5.33 16 16 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGAA................................................................................................. 24 3 3 5.33 16 16 0 0
...................................................................................................AACTGCAGTGAAGGCACTTGTGGA............................................................. 24 2 1 5.00 5 5 0 0
....................................................................................................ACTGCAGTGAAGGCCCTTGTGGT............................................................. 23 2 1 5.00 5 5 0 0
...............................................................CAATGTGCTTACAGTGCAGGTAGT................................................................................................. 24 1 1 5.00 5 5 0 0
................................................................AAAGTGCTTACAGTGCAGGTAATA................................................................................................ 24 2 1 5.00 5 5 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCA............................................................ 23 0 1 5.00 5 5 0 0
................................................................AAAGTGCTTACCGTGCAGGTAGT................................................................................................. 23 1 1 5.00 5 5 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAAT................................................................................................. 24 2 1 5.00 5 5 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTTT.................................................................................................. 24 2 2 5.00 10 10 0 0
....................................................................................................ACTGCAGTGAAGGCCCTTGTGG.............................................................. 22 1 1 5.00 5 5 0 0
.................................................................AAGTGCTTACAGTGCAGGTATT................................................................................................. 22 1 1 5.00 5 5 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAGT................................................................................................. 24 1 1 5.00 5 5 0 0
...............................................................CAAAGTGCTTACGGTGCAGGTAG.................................................................................................. 23 1 2 5.00 10 10 0 0
...............................................................CAAAGTGCTTACAGTGGAGGTAG.................................................................................................. 23 1 2 5.00 10 10 0 0
...................................................................GTGCTTACAGTGCAGGTA................................................................................................... 18 0 2 5.00 10 9 1 0
...............................................................CAAAGTGCTTAAAGTGCAGGTATT................................................................................................. 24 2 1 5.00 5 5 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCG............................................................ 24 1 1 5.00 5 1 0 4
...............................................................CAAAGTGCTTACAGAGCAGGTAGA................................................................................................. 24 2 2 5.00 10 9 0 1
................................................................AAAGTGCTTACAGTGCAGGAA................................................................................................... 21 1 2 5.00 10 10 0 0
...............................................................CAAAGGGCTTACAGTGCAGGTA................................................................................................... 22 1 3 5.00 15 15 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCATAT......................................................... 27 2 1 5.00 5 5 0 0
...............................................................CAAAGTGATTACAGTGCAGGTAGT................................................................................................. 24 1 1 5.00 5 5 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGCT............................................................ 23 1 1 5.00 5 5 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTGGTAT........................................................... 24 1 1 5.00 5 5 0 0
..................................................................................................GAACTGCAGTGAAGGCACTTGTGG.............................................................. 24 2 1 5.00 5 5 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTGTT................................................................................................. 24 2 1 5.00 5 5 0 0
...............................................................CAAAGTGCTTCCAGTGCAGGTAGA................................................................................................. 24 2 2 5.00 10 10 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGGCATT.......................................................... 26 0 1 5.00 5 5 0 0
................................................................AAAGTGCTTACAGTGCAGGTTAT................................................................................................. 23 2 1 5.00 5 5 0 0
...................................................................GTGCTTACAGTGCAGGTAGA................................................................................................. 20 1 2 5.00 10 9 1 0
................................................................CAAGTGCTTACAGTGCAGGTAG.................................................................................................. 22 1 2 5.00 10 10 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAGA.............................................................................................. 27 2 1 5.00 5 5 0 0
...............................................................CAAAGAGCTTACAGTGCAGGTAT.................................................................................................. 23 2 2 5.00 10 10 0 0
...............................................................CAAAGTGCTTACACTGCAGGTAT.................................................................................................. 23 2 3 4.67 14 14 0 0
...............................................................CAAAGTACTTACAGTGCAGGTAG.................................................................................................. 23 1 2 4.50 9 9 0 0

Anti-sense strand reads

CTTCTCCGGTAGCAGAACCCTCCCTGACTTCGGCCGGCCGACTGGCTGGCCAGTCCTATTACAGTTTCACGAATGTCACGTCCATCACCACACACGTAGATGACGTCACTTCCGTGAACACCGTAACACGACTGTCGACGGAGCTCTCCCCGACCCGACCCGCGGCACCCCTCCCGGACGACCG
***********************************************..(((((.(((((((((((((((((.((.(((((.(((((.......)).)))))))).)).)))))))).))))))))).)))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM