ID:

rno-mir-153

 Coordinate:

chr6:145105064-145105150 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.0

Sense Strand Reads

CTAACGCTGCTCACTCTCAAACCGACAAACCCTTACTTTGCCAGCTACTTAGCGGTGGCCAGTGTCATTTTTGTGATGTTGCAGCTAGTAATATGAGCCCAGTTGCATAGTCACAAAAGTGATCATTGGAAACTGTGACTGCAGCAGGGACATGGGGGCCCCTCTCTGAGCCTCTAACGACCTCACC
************************************************...(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).....********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
......................................................................................................TTGCATAGTCACAAAAGTGATCAT............................................................. 24 0 1 30.00 30 29 1
......................................................................................................TTGCATAGTCACAAAAGTGATCA.............................................................. 23 0 1 25.00 25 24 1
.......................................................................................................TGCATAGTCACAAAAGTGATCAT............................................................. 23 0 1 6.00 6 6 0
......................................................................................................TTGCATAGTCACAAAAGTGATC............................................................... 22 0 1 4.00 4 4 0
.......................................................................................................TGCATAGTCACAAAAGTGATCA.............................................................. 22 0 1 2.00 2 2 0
...............................................................GTCATTTTTGTGATGTTGCAGCT..................................................................................................... 23 0 1 2.00 2 2 0
......................................................................................................TTGCATAGTCACAAAAGTGATCAA............................................................. 24 1 1 2.00 2 2 0
...................................................................................................CAGTTGCATAGTCACAAAAGTG.................................................................. 22 0 1 2.00 2 2 0
......................................................................................................TTGCATAGTCACAAAAGTGAT................................................................ 21 0 1 2.00 2 2 0
......................................................................................................TTGCATAGTCACAAAAGTGA................................................................. 20 0 1 1.00 1 0 1
......................................................................................................TTGCATAGTCACAAAAGTGATGAT............................................................. 24 1 1 1.00 1 1 0
...............................................................GTCATTTTTGTGAAGTTGCAGCTTA................................................................................................... 25 3 1 1.00 1 1 0
...............................................................GTCATTTTTGTGATGTTGCAGCTTA................................................................................................... 25 2 1 1.00 1 1 0
......................................................................................................TTGCATAGTCACAAAAGTGATCCTTT........................................................... 26 2 1 1.00 1 0 1
......................................................................................................TTGCATAGACACAAAAGTGATCAT............................................................. 24 1 1 1.00 1 1 0
...............................................................GTCATTTTTGTGAAGTTGCAGCT..................................................................................................... 23 1 1 1.00 1 1 0
.....................................................................................................ATTGCATAGTCACAAAAGTG.................................................................. 20 1 1 1.00 1 0 1
......................................................................................................TTGCATAGTCACAATAGTGATCAT............................................................. 24 1 1 1.00 1 1 0
.......................................................................................................TGCATAGTCACAAAAGTGA................................................................. 19 0 1 1.00 1 0 1
...............................................................GTCATTTTTGTGATGTTGCAGCTT.................................................................................................... 24 1 1 1.00 1 1 0
......................................................................................................TTGCATAGTCACAAAAGTGATCATAT........................................................... 26 2 1 1.00 1 1 0
......................................................................................................TTGCATAGTCACAAAAGTGAAA............................................................... 22 2 6 0.17 1 1 0

Anti-sense strand reads

GATTGCGACGAGTGAGAGTTTGGCTGTTTGGGAATGAAACGGTCGATGAATCGCCACCGGTCACAGTAAAAACACTACAACGTCGATCATTATACTCGGGTCAACGTATCAGTGTTTTCACTAGTAACCTTTGACACTGACGTCGTCCCTGTACCCCCGGGGAGAGACTCGGAGATTGCTGGAGTGG
**********************************************...(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).....************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:48 PM