ID:rno-mir-150 |
Coordinate:chr1:101115974-101116058 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -51.5 | -51.0 |
 |
 |
|
CAGAAGGCCGTGGTGAAGCGGTGCATTCCGCAGCATCTCTGCAGAGGACTCTTCTCAAGGCCCTGTCTCCCAACCCTTGTACCAGTGCTGTGCCTCAGACCCTGGTACAGGCCTGGGGGACAGGGACTTGGGGACCCCAGCAGCAGCAACTCCAGCTTCTCCTGCAGCCAAGGGACTTTTCCCCA
**************************************************.((((((((.((((((((((((..(((.(((((((..(((.....)))...))))))))))..)))))))))))).)))))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| .................................................................TCTCCCAACCCTTGTACCAGTG.................................................................................................. | 22 | 0 | 1 | 107.00 | 107 | 103 | 4 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGT................................................................................................. | 23 | 1 | 1 | 74.00 | 74 | 74 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGA................................................................................................. | 23 | 1 | 1 | 40.00 | 40 | 39 | 1 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGC................................................................................................. | 23 | 0 | 1 | 19.00 | 19 | 19 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGT................................................................................................... | 21 | 0 | 1 | 17.00 | 17 | 15 | 2 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGCT................................................................................................ | 24 | 0 | 1 | 8.00 | 8 | 4 | 0 | 4 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGTGA................................................................................................. | 25 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGCA................................................................................................ | 24 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGT................................................................................................... | 23 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGTGT................................................................................................. | 25 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGCAA............................................................................................... | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGTG.................................................................................................. | 24 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGTT................................................................................................ | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..................................................................CTCCCAACCCTTGTACCAGTGC................................................................................................. | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGAAA............................................................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................CTCCCAACCCTTGTACCAGTGA................................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| .................................................................TCTCCCAACCCTTCTACCAGTG.................................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................CTGGTACAGGCCTGGGGGAT................................................................ | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTAT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCCGTGT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACC...................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCATGTACCAGTG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCATTGTACCAGTGT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTAACAGTGT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................CCTGGTACAGGCCTGGGGGACAAGT............................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................CCTGGTACAGGCCTGGGGGACATTT............................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGCG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................ATCTCCCAACCCTTGTACCAGTG.................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ....................................................................................................CCTGGTACAGGCCTGGGGGACAAT............................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCATTGTACCAGTGC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CTGGTACAGGCCTGGGGGA................................................................. | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGTAA................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGGG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................ATCTCCCAACCCTTGTACCAGTGT................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGTTT............................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGG................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTCTACCAGTGT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTAACAGTGA................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGGT................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTAACAGTGCT................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .....................................................................................................CTGGTACAGGCCTGGGGGACATAT............................................................ | 24 | 3 | 3 | 1.00 | 3 | 3 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGCC................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTCGTACCAGTG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .................................................................TCTCCCCACCCTTGTACCAGTG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTATACCAGTGA................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CTGGTACAGGCCTGGGGGACATT............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCTTTGTACCAGTG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGTATCCCAACCCTTGTACCAGTG.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACGCTTGTACCAGTG.................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGTCTCCCAACCCTTGTACCAGTT.................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCCGTGC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................CCTCCCAACCCTTGTACCAGTGC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGCGT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAG.................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTACCAGTGCTTTT............................................................................................. | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTCTACCAGTGC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................CCTGGTACAGGCCTGGGGGACAA.............................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CTGGTACAGGCCTGGGGGATAAT............................................................. | 23 | 3 | 3 | 0.67 | 2 | 0 | 0 | 2 |
| .................................................................TCTCCCAACCCTTGAACCAGTG.................................................................................................. | 22 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..................................................................CTCCCAACCCTTGTACCAGTGAAA............................................................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .................................................................TCTCCCAACCCTTGTATCAGGGA................................................................................................. | 23 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
|
GTCTTCCGGCACCACTTCGCCACGTAAGGCGTCGTAGAGACGTCTCCTGAGAAGAGTTCCGGGACAGAGGGTTGGGAACATGGTCACGACACGGAGTCTGGGACCATGTCCGGACCCCCTGTCCCTGAACCCCTGGGGTCGTCGTCGTTGAGGTCGAAGAGGACGTCGGTTCCCTGAAAAGGGGT
**************************************************.((((((((.((((((((((((..(((.(((((((..(((.....)))...))))))))))..)))))))))))).)))))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
|---|---|---|---|---|---|---|
| .................................................................AGAGGGTTGGGAACATGGTCACG................................................................................................. | 23 | 0 | 1 | 1.00 | 1 | 1 |
| ............................................................AAGACAGAGGGTTGGGAACATG....................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 |
Generated: 04/30/2015 at 05:29 PM