ID:

rno-mir-143

 Coordinate:

chr18:56971273-56971377 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.1 -49.8

Sense Strand Reads

CCACTGCGCATGCTCATTCTCCTGCCCAGGAAGAAAGCCGTGGCCTGAGCGCGGAGCGCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGGGAGAAGATGTTCTGCAGCCGTCGCCGGGACATGGTAAGTGTTGGTGAGGGGTAGCGGGCCCGATCGGT
************************************************************..((((((..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..))))))....************************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.............................................................................................................TGAGATGAAGCACTGTAGCTCT.......................................................................... 22 1 1 23585.00 23585 18661 4716 208
.............................................................................................................TGAGATGAAGCACTGTAGCTC........................................................................... 21 0 1 14562.00 14562 6774 7717 71
.............................................................................................................TGAGATGAAGCACTGTAGCTCTT......................................................................... 23 2 1 11580.00 11580 10740 758 82
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTT........................................................................ 24 3 1 3395.00 3395 3288 88 19
.............................................................................................................TGAGATGAAGCACTGTAGCTCCG......................................................................... 23 1 1 3299.00 3299 0 0 3299
.............................................................................................................TGAGATGAAGCACTGTAGCTCA.......................................................................... 22 0 1 2333.00 2333 2081 243 9
...........................................................................GGTGCAGTGCTGCATCTCTGGTCG.......................................................................................................... 24 1 1 1684.00 1684 2 0 1682
.............................................................................................................TGAGATGAAGCACTGTAGCTCTA......................................................................... 23 2 1 1530.00 1530 1508 11 11
.............................................................................................................TGAGATGAAGCACTGTAGCT............................................................................ 20 0 1 1229.00 1229 940 287 2
.............................................................................................................TGAGATGAAGCACTGTAGCTCAA......................................................................... 23 1 1 824.00 824 773 51 0
.............................................................................................................TGAGATGAAGCACTGTAGC............................................................................. 19 0 1 618.00 618 232 368 18
.............................................................................................................TGAGATGAAGCACTGTAGCTCAT......................................................................... 23 1 1 436.00 436 413 17 6
............................................................................................................ATGAGATGAAGCACTGTAGCTCT.......................................................................... 23 2 1 334.00 334 231 96 7
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAT........................................................................ 24 3 2 310.50 621 620 0 1
.............................................................................................................TGAGATGAAGCACTGTAGCTCTCG........................................................................ 24 2 1 296.00 296 1 0 295
............................................................................................................CTGAGATGAAGCACTGTAGCTCT.......................................................................... 23 1 1 291.00 291 271 14 6
...........................................................................GGTGCAGTGCTGCATCTCTGG............................................................................................................. 21 0 1 282.00 282 135 142 5
..............................................................................................................GAGATGAAGCACTGTAGCTCT.......................................................................... 21 1 2 266.50 533 489 44 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTA........................................................................ 24 3 3 235.00 705 704 1 0
............................................................................................................ATGAGATGAAGCACTGTAGCTC........................................................................... 22 1 1 230.00 230 54 176 0
..............................................................................................................GAGATGAAGCACTGTAGCTC........................................................................... 20 0 1 222.00 222 157 65 0
.................................................................................................................ATGAAGCACTGTAGCTC........................................................................... 17 0 2 170.50 341 0 341 0
............................................................................GTGCAGTGCTGCATCTCTGGTCG.......................................................................................................... 23 1 1 153.00 153 1 0 152
..............................................................................................................GAGATGAAGCACTGTAGCTCTT......................................................................... 22 2 2 145.00 290 285 5 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAA........................................................................ 24 3 4 122.75 491 489 2 0
...........................................................................GGTGCAGTGCTGCATCTCTGGATCG......................................................................................................... 25 3 1 122.00 122 0 0 122
............................................................................................................ATGAGATGAAGCACTGTAGCTCTT......................................................................... 24 3 1 121.00 121 94 27 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAT........................................................................ 24 2 1 114.00 114 111 2 1
.............................................................................................................TGAGATGAAGCACTGTAGCTCG.......................................................................... 22 1 1 114.00 114 19 3 92
.............................................................................................................TGAGATGAAGCACTGTAGCTA........................................................................... 21 1 1 114.00 114 89 25 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCTT......................................................................... 24 2 1 109.00 109 102 1 6
.............................................................................................................TGAGATGACGCACTGTAGCTCT.......................................................................... 22 2 1 96.00 96 94 2 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTTCG......................................................................................................... 25 2 1 94.00 94 0 0 94
.............................................................................................................TGAGATGAAGCACTGTAGCTCAG......................................................................... 23 0 1 88.00 88 32 4 52
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAA........................................................................ 24 2 2 80.50 161 152 9 0
.............................................................................................................TGAGATGAAGCACTGTCGCTCT.......................................................................... 22 2 1 80.00 80 80 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCC.......................................................................... 22 1 1 79.00 79 68 8 3
.............................................................................................................TGAGATGAAGCACTGTAGCTT........................................................................... 21 1 1 72.00 72 56 16 0
............................................................................................................CTGAGATGAAGCACTGTAGCTC........................................................................... 22 0 1 71.00 71 51 20 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTAA....................................................................... 25 3 2 69.50 139 138 0 1
.............................................................................................................TGAGATGAAGCACTGTAGCTTT.......................................................................... 22 2 1 69.00 69 65 4 0
..............................................................................................................GAGATGAAGCACTGTAGCTCA.......................................................................... 21 0 1 66.00 66 61 5 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAG........................................................................ 24 2 1 65.00 65 65 0 0
.............................................................................................................TGAGATGAAGCACTGTAG.............................................................................. 18 0 1 61.00 61 17 44 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAAA....................................................................... 25 3 2 60.50 121 120 1 0
...........................................................................GGTGCAGTGCTGCATCTCTGGT............................................................................................................ 22 0 1 59.00 59 21 38 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTC......................................................................... 23 2 1 56.00 56 52 4 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTTA....................................................................... 25 3 1 52.00 52 52 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTG......................................................................... 23 1 1 51.00 51 27 5 19
...........................................................................GGTGCAGTGCTGCATCTCTGGTC........................................................................................................... 23 0 1 51.00 51 46 5 0
.............................................................................................................TGAGATGACGCACTGTAGCTC........................................................................... 21 1 1 49.00 49 40 7 2
.............................................................................................................TGAGATGAAGCACTGTAGCTAAA......................................................................... 23 2 1 49.00 49 47 2 0
................................................................................................................GATGAAGCACTGTAGCTC........................................................................... 18 0 1 48.00 48 4 44 0
.............................................................................................................TTAGATGAAGCACTGTAGCTC........................................................................... 21 1 1 48.00 48 0 48 0
...........................................................................GGTGCAGTGCTGCCTCTCTGGTCG.......................................................................................................... 24 2 1 48.00 48 0 0 48
.............................................................................................................TGCGATGAAGCACTGTAGCTC........................................................................... 21 1 1 45.00 45 9 36 0
.............................................................................................................TGCGATGAAGCACTGTAGCTCT.......................................................................... 22 2 1 44.00 44 21 22 1
.............................................................................................................TGAGATGAAGCACTGTAGCTAA.......................................................................... 22 1 1 44.00 44 36 8 0
.............................................................................................................TGAGATGAAGGACTGTAGCTCT.......................................................................... 22 2 1 43.00 43 28 15 0
.............................................................................................................TGAGATGAAGCCCTGTAGCTCCG......................................................................... 23 2 1 42.00 42 0 0 42
.............................................................................................................TGAGATGAAGCACTGTAGCTCACG........................................................................ 24 1 1 41.00 41 0 0 41
.............................................................................................................TGAGATGAAGCACCGTAGCTCT.......................................................................... 22 2 1 41.00 41 41 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCA.......................................................................................................... 24 0 1 40.00 40 36 2 2
...........................................................................GGTGCAGTGCTGCATCTCTGGA............................................................................................................ 22 1 1 39.00 39 15 20 4
.............................................................................................................TGAGATGAAGCACTGTAGCTCCT......................................................................... 23 2 1 39.00 39 35 2 2
...........................................................................GGTGCAGTGCTGCATCTCTGGCCG.......................................................................................................... 24 2 1 39.00 39 0 0 39
..............................................................................................................GAGATGAAGCACTGTAGCT............................................................................ 19 0 1 38.00 38 30 8 0
............................................................................GTGCAGTGCTGCATCTCTGG............................................................................................................. 20 0 1 38.00 38 30 8 0
.............................................................................................................TGAGATGACGCACTGTAGCTCCG......................................................................... 23 2 1 37.00 37 0 0 37
.............................................................................................................TGAGATGAAGCCCTGTAGCTC........................................................................... 21 1 1 37.00 37 33 4 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCA.......................................................................... 23 0 1 36.00 36 36 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCT.......................................................................................................... 24 1 1 36.00 36 25 11 0
.............................................................................................................TGAGATGAAGCACTGTCGCTC........................................................................... 21 1 1 36.00 36 32 4 0
............................................................................................................TTGAGATGAAGCACTGTAGCTC........................................................................... 22 1 1 35.00 35 34 1 0
.............................................................................................................TGGGATGAAGCACTGTAGCTC........................................................................... 21 1 1 35.00 35 9 26 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCTTT........................................................................ 25 3 1 34.00 34 34 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAGA........................................................................ 24 1 1 33.00 33 27 6 0
.............................................................................................................TGAGATGAAGGACTGTAGCTC........................................................................... 21 1 1 32.00 32 5 27 0
.............................................................................................................TGAGATGAAGAACTGTAGCTCT.......................................................................... 22 2 2 31.00 62 46 15 1
............................................................................................................ATGAGATGAAGCACTGTAGCTCA.......................................................................... 23 1 1 31.00 31 29 2 0
.............................................................................................................TGAGATGACGCACTGTAGCTCA.......................................................................... 22 1 1 30.00 30 29 1 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCTA......................................................................... 24 2 1 30.00 30 29 1 0
.............................................................................................................TGGGATGAAGCACTGTAGCTCT.......................................................................... 22 2 1 29.00 29 14 15 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCCG......................................................................................................... 25 1 1 29.00 29 0 0 29
.............................................................................................................TGAGATGAAGAACTGTAGCTC........................................................................... 21 1 1 29.00 29 15 13 1
.............................................................................................................TGAGATGAAGCACTGTAGCTCGT......................................................................... 23 2 1 29.00 29 28 1 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTAAA...................................................................... 26 3 1 27.00 27 27 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTG........................................................................ 24 2 1 27.00 27 27 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCGA......................................................................... 23 2 1 27.00 27 26 1 0
.............................................................................................................TCAGATGAAGCACTGTAGCTC........................................................................... 21 1 1 27.00 27 2 25 0
.............................................................................................................TGAGATGAAGCACTGTCGCTCCG......................................................................... 23 2 1 27.00 27 0 0 27
............................................................................................................ATGAGATGAAGCACTGTAGCTCCG......................................................................... 24 2 1 26.00 26 0 0 26
.............................................................................................................TGAGATGAAGCACTGTAGCTCGG......................................................................... 23 1 1 26.00 26 0 0 26
.............................................................................................................TGAGATGAAGCACTGTAGCTCTCT........................................................................ 24 3 1 26.00 26 26 0 0
..........................................................................AGGTGCAGTGCTGCATCTCTGGA............................................................................................................ 23 1 1 26.00 26 26 0 0
............................................................................................................ATGAGATGAAGCACTGTAGCT............................................................................ 21 1 1 26.00 26 19 7 0
.............................................................................................................TGTGATGAAGCACTGTAGCTC........................................................................... 21 1 1 26.00 26 0 26 0
.............................................................................................................TGAGATGAAGCACCGTAGCTCCG......................................................................... 23 2 1 25.00 25 0 0 25
.............................................................................................................TGAGATGACGCACTGTAGCTCTT......................................................................... 23 3 2 23.50 47 46 0 1
.............................................................................................................TGAGATGAAGCACTGTAGCTCTGT........................................................................ 24 2 1 23.00 23 23 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCATT........................................................................ 24 2 1 23.00 23 23 0 0
.............................................................................................................TGAGATGAAGCACTTTAGCTCT.......................................................................... 22 2 1 23.00 23 10 13 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAG........................................................................ 24 1 1 23.00 23 21 2 0
.............................................................................................................TGAGATGAAGAACTGTAGCTCCG......................................................................... 23 2 1 23.00 23 0 0 23
...........................................................................GGTGCAGTGCTGCATCTCTGGACG.......................................................................................................... 24 2 1 23.00 23 0 0 23
..............................................................................................................GAGATGAAGCACTGTAGCTCAA......................................................................... 22 1 1 22.00 22 22 0 0
..................................................................................................................TGAAGCACTGTAGCTC........................................................................... 16 0 2 22.00 44 1 43 0
..............................................................................................................GAGATGAAGCACTGTAGCTCTA......................................................................... 22 2 2 22.00 44 44 0 0
.............................................................................................................TGAGATGAAGCACTTTAGCTC........................................................................... 21 1 1 22.00 22 2 20 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAGT........................................................................ 24 1 1 22.00 22 21 1 0
.............................................................................................................TGAGATGAAGCACTCTAGCTC........................................................................... 21 1 1 22.00 22 3 19 0
.............................................................................................................TGAGATGAAGCACTATAGCTCT.......................................................................... 22 2 1 21.00 21 11 10 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCCG......................................................................... 24 1 1 20.00 20 0 0 20
...........................................................................GGTGCAGTGCTGCATCTCTGGTT........................................................................................................... 23 1 1 20.00 20 11 1 8
.............................................................................................................TGAGATGAAGCACCGTAGCTC........................................................................... 21 1 1 20.00 20 20 0 0
.............................................................................................................TGAGATGAAGCACTATAGCTC........................................................................... 21 1 1 19.00 19 1 18 0
.............................................................................................................TAAGATGAAGCACTGTAGCTC........................................................................... 21 1 1 19.00 19 3 16 0
.............................................................................................................TGAGATGAAGCACAGTAGCTCCG......................................................................... 23 2 1 19.00 19 0 0 19
............................................................................................................CTGAGATGAAGCACTGTAGCTCTAT........................................................................ 25 3 1 19.00 19 19 0 0
............................................................................GTGCAGTGCTGCATCTCTGGTCCG......................................................................................................... 24 1 1 19.00 19 0 0 19
.............................................................................................................TAAGATGAAGCACTGTAGCTCT.......................................................................... 22 2 1 19.00 19 4 15 0
............................................................................................................ATGAGATGAAGCACTGTAGCTCTA......................................................................... 24 3 1 18.00 18 18 0 0
............................................................................................................CTGAGATGAAGCACTGTAGCT............................................................................ 21 0 1 18.00 18 14 4 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAGA....................................................................... 25 2 1 18.00 18 17 1 0
.................................................................................................................ATGAAGCACTGTAGCTCT.......................................................................... 18 1 7 17.71 124 13 111 0
.............................................................................................................TGAGATGAAGTACTGTAGCTC........................................................................... 21 1 2 17.50 35 12 23 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCCA......................................................................... 23 2 1 16.00 16 14 0 2
.............................................................................................................TGTGATGAAGCACTGTAGCTCT.......................................................................... 22 2 2 16.00 32 8 23 1
.............................................................................................................TGAGATGAAGCACTCTAGCTCT.......................................................................... 22 2 1 16.00 16 6 10 0
.............................................................................................................TGAGATGAAGCCCTGTAGCTCT.......................................................................... 22 2 5 15.80 79 71 4 4
.............................................................................................................TGAGATTAAGCACTGTAGCTC........................................................................... 21 1 1 15.00 15 2 13 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTTT.......................................................................................................... 24 2 1 15.00 15 15 0 0
.............................................................................................................TGAGATGAAGCACTGCAGCTC........................................................................... 21 1 1 15.00 15 3 11 1
............................................................................................................ATGAGATGAAGCACTGTAGC............................................................................. 20 1 1 14.00 14 4 10 0
.............................................................................................................TGAGATGACGCACTGTAGCTCTG......................................................................... 23 2 1 14.00 14 1 0 13
.............................................................................................................TGAGATGAAGTACTGTAGCTCT.......................................................................... 22 2 2 14.00 28 13 13 2
..............................................................................................................GAGATGAAGCACTGTAGCTCTTT........................................................................ 23 3 7 13.57 95 93 2 0
...........................................................................GGTGCAGTGCTACATCTCTGGTCG.......................................................................................................... 24 2 1 13.00 13 1 0 12
...........................................................................GGCGCAGTGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 13.00 13 0 0 13
...........................................................................GGAGCAGTGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 13.00 13 0 0 13
............................................................................GTGCAGTGCTGCATCTCTGGTC........................................................................................................... 22 0 1 13.00 13 13 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGATCG.......................................................................................................... 24 2 1 13.00 13 0 0 13
.............................................................................................................TGAGATGAAGCACTGTAGATCT.......................................................................... 22 2 2 12.50 25 23 2 0
.............................................................................................................TGATATGAAGCACTGTAGCTCT.......................................................................... 22 2 1 12.00 12 7 5 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCAA......................................................................... 24 1 1 12.00 12 12 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTGA....................................................................... 25 2 1 12.00 12 12 0 0
.............................................................................................................TGAGATGAAGCACTGTATCTC........................................................................... 21 1 1 12.00 12 0 12 0
.............................................................................................................TGAGACGAAGCACTGTAGCTCT.......................................................................... 22 2 1 12.00 12 8 4 0
...........................................................................................................TTTGAGATGAAGCACTGTAGCTC........................................................................... 23 1 1 12.00 12 12 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTAT.......................................................................................................... 24 2 1 12.00 12 11 1 0
...........................................................................GGTGCAGTGCTGCATCTCTGGCG........................................................................................................... 23 2 1 12.00 12 0 0 12
.............................................................................................................TGAGATGCAGCACTGTAGCTC........................................................................... 21 1 1 12.00 12 6 6 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCAACG....................................................................................................... 27 3 1 12.00 12 0 0 12
...........................................................................................................CTTGAGATGAAGCACTGTAGCT............................................................................ 22 2 1 12.00 12 12 0 0
.............................................................................................................TGAGATGACGCACTGTAGCTCG.......................................................................... 22 2 1 12.00 12 11 0 1
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTGT....................................................................... 25 3 1 12.00 12 12 0 0
..............................................................................................................GAGATGAAGCACTGTAGCTCAT......................................................................... 22 1 1 12.00 12 12 0 0
.............................................................................................................TGAGATGACGCACTGTAGCTCC.......................................................................... 22 2 1 12.00 12 10 0 2
...........................................................................GGTGCAGTGCCGCATCTCTGGTCG.......................................................................................................... 24 2 1 12.00 12 0 0 12
.............................................................................................................TTAGATGAAGCACTGTAGCTCT.......................................................................... 22 2 2 11.50 23 6 17 0
.............................................................................................................TGAGATGAAGCACTGTAGCCCT.......................................................................... 22 2 1 11.00 11 7 4 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAC........................................................................ 24 2 1 11.00 11 11 0 0
.............................................................................................................TGAGATCAAGCACTGTAGCTC........................................................................... 21 1 1 11.00 11 5 6 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCTCG........................................................................................................ 26 3 1 11.00 11 0 0 11
.............................................................................................................TGAGATGAAGGACTGTAGCTCCG......................................................................... 23 2 1 11.00 11 0 0 11
............................................................................................................ATGAGATGAAGCACTGTAGCTCAA......................................................................... 24 2 1 10.00 10 9 1 0
.............................................................................................................TGAGCTGAAGCACTGTAGCTC........................................................................... 21 1 1 10.00 10 3 7 0
.............................................................................................................TGAGATGAAGCACTGTAGCTAAT......................................................................... 23 2 1 10.00 10 10 0 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCAT......................................................................... 24 1 1 10.00 10 8 2 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCATA........................................................................ 24 2 1 10.00 10 10 0 0
.............................................................................................................CGAGATGAAGCACTGTAGCTC........................................................................... 21 1 1 10.00 10 5 5 0
...............................................................................................................AGATGAAGCACTGTAGCTC........................................................................... 19 0 1 10.00 10 1 9 0
..............................................................................................................GAGATGAAGCACTGTAGC............................................................................. 18 0 1 10.00 10 7 3 0
.............................................................................................................TGAGATGAAGCCCTGTAGCTCA.......................................................................... 22 1 1 10.00 10 10 0 0
.............................................................................................................TGAGATGAAGCACTGTAGATCCG......................................................................... 23 2 1 10.00 10 0 0 10
............................................................................GTGCAGTGCTGCATCTCTGGTCT.......................................................................................................... 23 1 1 10.00 10 9 1 0
.............................................................................................................TGAGATGAAGCACTGTCGCTCA.......................................................................... 22 1 1 10.00 10 10 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTGA........................................................................ 24 2 2 9.50 19 18 1 0
.............................................................................................................TGAGATGAAGCACTGTAGATC........................................................................... 21 1 1 9.00 9 5 4 0
............................................................................................................TTGAGATGAAGCACTGTAGCTCCG......................................................................... 24 2 1 9.00 9 0 0 9
.............................................................................................................TGAGATGAAGCACAGTAGCTCT.......................................................................... 22 2 4 9.00 36 34 0 2
..............................................................................................................GAGATGAAGCACTGTAGCTCTAT........................................................................ 23 3 3 8.67 26 26 0 0
..........................................................................AGGTGCAGTGCTGCATCTCTGTCG........................................................................................................... 24 3 2 8.50 17 0 0 17
.............................................................................................................TGAGATGAAGCACTGTCGCTCTT......................................................................... 23 3 5 8.20 41 41 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTAG.......................................................................................................... 24 2 1 8.00 8 5 0 3
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAAA....................................................................... 25 2 2 8.00 16 14 2 0
..........................................................................AGGTGCAGTGCTGCATCTCTGG............................................................................................................. 22 0 1 8.00 8 5 3 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTTTAA...................................................................... 26 3 1 8.00 8 8 0 0
.............................................................................................................TGAGATGAACCACTGTAGCTCT.......................................................................... 22 2 1 8.00 8 7 1 0
.............................................................................................................TGAGATGACGCACTGTAGCTCTA......................................................................... 23 3 1 8.00 8 8 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTAT.......................................................................... 22 2 3 7.67 23 22 1 0
.............................................................................................................CGAGATGAAGCACTGTAGCTCT.......................................................................... 22 2 2 7.50 15 10 5 0
.............................................................................................................TGAGATGAACCACTGTAGCTC........................................................................... 21 1 1 7.00 7 3 4 0
.............................................................................................................TGAGATGAAGCATTGTAGCTCT.......................................................................... 22 2 1 7.00 7 6 1 0
.............................................................................................................TCAGATGAAGCACTGTAGCTCT.......................................................................... 22 2 2 7.00 14 6 8 0
.............................................................................................................TGAGATGAAGCACTGTAGCA............................................................................ 20 1 2 7.00 14 2 12 0
.............................................................................................................TGAGATGAAGCACTGCAGCTCCG......................................................................... 23 2 1 7.00 7 0 0 7
.............................................................................................................TGAGATGAAGCACTGTACCTC........................................................................... 21 1 1 7.00 7 2 5 0
................................................................................................................GATGAAGCACTGTAGC............................................................................. 16 0 1 7.00 7 1 6 0
...........................................................................GGGGCAGTGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 7.00 7 0 0 7
............................................................................................................TTGAGATGAAGCACTGTAGCTCT.......................................................................... 23 2 1 7.00 7 7 0 0
.............................................................................................................TGAGATGAAGCACTGCAGCTCT.......................................................................... 22 2 3 6.67 20 16 4 0
.............................................................................................................TGAGATGAAGCACTGTAGCTTTT......................................................................... 23 3 10 6.60 66 65 1 0
.............................................................................................................TGAGATGAAGCAATGTAGCTCT.......................................................................... 22 2 2 6.50 13 9 4 0
.............................................................................................................TGAGATGAATCACTGTAGCTC........................................................................... 21 1 2 6.50 13 2 11 0
..............................................................................................................GAGATGAAGCACTGTAGCTCTTA........................................................................ 23 3 5 6.20 31 31 0 0
.............................................................................................................TGAGATGAAGCACTGTTGCTC........................................................................... 21 1 1 6.00 6 6 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAC......................................................................... 23 1 1 6.00 6 6 0 0
.............................................................................................................TGCGATGAAGCACTGTAGCTCCG......................................................................... 23 2 1 6.00 6 0 0 6
.............................................................................................................TGAGATGAAGCACTGTAGCTTCG......................................................................... 23 2 1 6.00 6 0 0 6
............................................................................................................CTGAGATGAAGCACTGTAGCTCTAA........................................................................ 25 3 2 6.00 12 12 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAAAA...................................................................... 26 3 1 6.00 6 6 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTATA....................................................................... 25 3 1 6.00 6 6 0 0
............................................................................GTGCAGTGCTGCATCTCTGGT............................................................................................................ 21 0 1 6.00 6 0 6 0
.............................................................................................................TGGGATGAAGCACTGTAGCTCA.......................................................................... 22 1 1 6.00 6 4 2 0
...........................................................................................................TCTGAGATGAAGCACTGTAGC............................................................................. 21 0 1 6.00 6 6 0 0
............................................................................................................CTGAGATGAAGCACTGTAGCTCTTA........................................................................ 25 3 1 6.00 6 6 0 0
.............................................................................................................TGAGATGAAGCACCGTAGCTCTT......................................................................... 23 3 4 6.00 24 20 2 2
...........................................................................GGTGCAGTGCTGCTTCTCTGGTCG.......................................................................................................... 24 2 1 6.00 6 0 0 6
.............................................................................................................TGAGATGCAGCACTGTAGCTCCG......................................................................... 23 2 1 6.00 6 0 0 6
.............................................................................................................TGAGATGAAGCACTGTAGATCA.......................................................................... 22 1 1 6.00 6 6 0 0
.............................................................................................................TGATATGAAGCACTGTAGCTC........................................................................... 21 1 1 6.00 6 1 5 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTTG.......................................................................................................... 24 2 1 6.00 6 0 0 6
............................................................................................................CTGAGATGAAGCACTGTAGCTAA.......................................................................... 23 1 1 6.00 6 6 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGAA........................................................................................................... 23 2 3 5.67 17 15 2 0
.............................................................................................................TGAGATGACGCACTGTAGCTCAT......................................................................... 23 2 2 5.50 11 11 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGGCG.......................................................................................................... 24 2 2 5.50 11 0 0 11
.............................................................................................................TGAGATGAAGCACTGTTGCTCT.......................................................................... 22 2 2 5.50 11 9 1 1
...........................................................................GGTGCAGTGCTGCATCTCTGGTCATA........................................................................................................ 26 2 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTG........................................................................... 21 1 1 5.00 5 3 2 0
.............................................................................................................TGAGATGAAGCACCGTAGCTCA.......................................................................... 22 1 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCTACA....................................................................... 25 3 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGTACCTCT.......................................................................... 22 2 1 5.00 5 3 2 0
.............................................................................................................TGAGATGAAGCACTCTAGCT............................................................................ 20 1 1 5.00 5 3 2 0
..............................................................................................................GAGATGAAGCACTGTAGCTCTAG........................................................................ 23 2 1 5.00 5 5 0 0
...........................................................................GGTGCAGGGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 5.00 5 0 0 5
.............................................................................................................AGAGATGAAGCACTGTAGCTC........................................................................... 21 1 1 5.00 5 2 3 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTAA.......................................................................................................... 24 1 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGTGGCTC........................................................................... 21 1 1 5.00 5 5 0 0
...........................................................................GGTGCAGTGTTGCATCTCTGGTTCG......................................................................................................... 25 3 1 5.00 5 0 0 5
.............................................................................................................TGAGATGAAGCATTGTAGCTC........................................................................... 21 1 1 5.00 5 2 3 0
...........................................................................................................AATGAGATGAAGCACTGTAGCTC........................................................................... 23 2 1 5.00 5 2 3 0
...........................................................................GGTGCAGTGCTGCAACTCTGGTCG.......................................................................................................... 24 2 1 5.00 5 0 0 5
.............................................................................................................TGAGATGATGCACTGTAGCTC........................................................................... 21 1 1 5.00 5 2 3 0
.............................................................................................................TGAGATGACGCACTGTAGCTCAA......................................................................... 23 2 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGGAGCTCCG......................................................................... 23 2 1 5.00 5 0 0 5
.............................................................................................................TGAGATGAAGCACTGTAGCCC........................................................................... 21 1 1 5.00 5 2 3 0
.............................................................................................................TGAGATGAAGCACGGTAGCTCT.......................................................................... 22 2 1 5.00 5 5 0 0
.............................................................................................................TGAGATGATGCACTGTAGCTCT.......................................................................... 22 2 1 5.00 5 4 1 0
.............................................................................................................TGGGATGAAGCACTGTAGCTCCG......................................................................... 23 2 1 5.00 5 0 0 5
................................................................................................................GATGAAGCACTGTAGCTCAGGAAT..................................................................... 24 1 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGAACTGTAGCTCA.......................................................................... 22 1 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACAGTAGCTC........................................................................... 21 1 2 5.00 10 10 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCCCG........................................................................ 24 2 1 5.00 5 0 0 5
.............................................................................................................TGAGATGAAACACTGTAGCTCAA......................................................................... 23 2 1 5.00 5 5 0 0
.............................................................................................................TGAGATGAAGCACTGTCGCTCC.......................................................................... 22 2 1 5.00 5 5 0 0
.............................................................................................................TGAGATCAAGCACTGTAGCTCT.......................................................................... 22 2 2 4.50 9 3 6 0
.............................................................................................................TGAGATGAAGCACTGTGGCTCT.......................................................................... 22 2 2 4.50 9 8 0 1
.............................................................................................................TGAGATGAAGCACTGTATCTCT.......................................................................... 22 2 3 4.33 13 6 7 0
.............................................................................................................TGCGATGAAGCACTGTAGCTCTT......................................................................... 23 3 4 4.25 17 15 2 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAGAA....................................................................... 25 1 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAGCACTGTCGCTCAT......................................................................... 23 2 1 4.00 4 4 0 0
.............................................................................................................GGAGATGAAGCACTGTAGCTC........................................................................... 21 1 2 4.00 8 4 4 0
...........................................................................GGTGCAGAGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 4.00 4 0 0 4
...........................................................................................................AATGAGATGAAGCACTGTAGCTCAGT........................................................................ 26 3 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTTA.......................................................................... 22 1 1 4.00 4 3 1 0
.............................................................................................................TGAGATGAAGCACTATAGCTCCG......................................................................... 23 2 1 4.00 4 0 0 4
..........................................................................................................CTTTGAGATGAAGCACTGTAGCT............................................................................ 23 2 1 4.00 4 4 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTTAT......................................................................................................... 25 2 1 4.00 4 4 0 0
.........................................................................................................AAAATGAGATGAAGCACTGTAGCTC........................................................................... 25 3 1 4.00 4 3 1 0
............................................................................GTGCAGTGCTGCATCTCTGGTCA.......................................................................................................... 23 0 1 4.00 4 4 0 0
...........................................................................GGTGCAGTGCTGCATCTCAGGTCG.......................................................................................................... 24 2 1 4.00 4 0 0 4
.............................................................................................................TGAGATGAAGCGCTGTAGCTCA.......................................................................... 22 1 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTAAG......................................................................... 23 1 1 4.00 4 3 0 1
.............................................................................................................TGAGATGAAGCATTGTAGCTCCG......................................................................... 23 2 1 4.00 4 0 0 4
...........................................................................GGTGCAGTGCTGCATCCCTGGTCG.......................................................................................................... 24 2 1 4.00 4 0 0 4
.............................................................................................................TGCGATGAAGCACTGTAGCTCA.......................................................................... 22 1 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAGCAATGTAGCTC........................................................................... 21 1 1 4.00 4 1 3 0
...........................................................................GGTACAGTGCTGCATCTCTGGTCG.......................................................................................................... 24 2 1 4.00 4 0 0 4
.............................................................................................................TGAGATGAAGCCCTGTAGCTCTCG........................................................................ 24 3 1 4.00 4 0 0 4
...........................................................................................................CCTGAGATGAAGCACTGTAGCTCT.......................................................................... 24 2 1 4.00 4 0 0 4
.............................................................................................................TGAGATGAAGCACTGTAGCTCTAC........................................................................ 24 3 2 4.00 8 8 0 0
.............................................................................................................TGAGATGAGGCACTGTAGCTC........................................................................... 21 1 1 4.00 4 1 3 0
...............................................................................................................AGATGAAGCACTGTAGCTCT.......................................................................... 20 1 2 4.00 8 2 6 0
.............................................................................................................TGAGATGACGCACTGTAGCT............................................................................ 20 1 1 4.00 4 4 0 0
................................................................................................................GATGAAGCACTGTAGCTCAGGAAA..................................................................... 24 1 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAACACTGTAGCTC........................................................................... 21 1 1 4.00 4 3 1 0
.............................................................................................................TGAGATGAAGCACTGTAGCTCAAGA....................................................................... 25 1 1 4.00 4 4 0 0
.............................................................................................................TGAGATGAAGCACTGTCGCT............................................................................ 20 1 2 4.00 8 7 1 0
.............................................................................................................TGAGATTAAGCACTGTAGCTCT.......................................................................... 22 2 3 3.67 11 6 5 0
.............................................................................................................TGAGATGCAGCACTGTAGCTCT.......................................................................... 22 2 4 3.50 14 13 1 0
................................................................................................................GATGAAGCACTGTAGCTCT.......................................................................... 19 1 3 3.33 10 4 6 0
...........................................................................................................AATGAGATGAAGCACTGTAGCTCT.......................................................................... 24 3 7 3.14 22 21 1 0
.............................................................................................................TGCGATGAAGCACTGTAGCTCTCG........................................................................ 24 3 1 3.00 3 0 0 3
...........................................................................................................TCTGAGATGAAGCACTGTAGCTCT.......................................................................... 24 1 1 3.00 3 3 0 0
...........................................................................GGTGCAGTGCTGCATCTCTGGTCTA......................................................................................................... 25 2 1 3.00 3 3 0 0
.............................................................................................................TGAGATGAAGCACTGTAGCTTAT......................................................................... 23 2 1 3.00 3 3 0 0
...........................................................................GGTGCAGTGCTGCCTCTCTGG............................................................................................................. 21 1 1 3.00 3 3 0 0
.............................................................................................................TGAGCTGAAGCACTGTAGCTCCG......................................................................... 23 2 1 3.00 3 0 0 3
...............................................................................................................AGATGAAGCACTGTAGC............................................................................. 17 0 1 3.00 3 0 3 0
.............................................................................................................TGAAATGAAGCACTGTAGCTCCG......................................................................... 23 2 1 3.00 3 0 0 3

Anti-sense strand reads

GGTGACGCGTACGAGTAAGAGGACGGGTCCTTCTTTCGGCACCGGACTCGCGCCTCGCGGACAGAGGGTCGGACTCCACGTCACGACGTAGAGACCAGTCAACCCTCAGACTCTACTTCGTGACATCGAGTCCTTCCCTCTTCTACAAGACGTCGGCAGCGGCCCTGTACCATTCACAACCACTCCCCATCGCCCGGGCTAGCCA
************************************************************..((((((..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..))))))....************************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:38 PM