ID:rno-mir-141 |
Coordinate:chr4:157236346-157236439 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -43.6 | -43.5 | -43.3 |
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CGGCAGCGGCATCCCTCTAGCGCTTGATCGGCGGTAGATCAATTTATGTTGGCTGACTCTGAGTCCATCTTCCAGTGCAGTGTTGGATGGTTGAAGTACGAAGCTCCTAACACTGTCTGGTAAAGATGGCCCCCGGGTCAGTTCCCTCAGCAGTGACCTTGGAGCCTTGAAGACCACCGACGCCTCCAGACCAA
***********************************...........(((((((((((((.....(((((((((((.((((((((((..((((.........)))).))))))))))))))..))))))).....)))))))).....))))).......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGC................................................................ | 23 | 0 | 1 | 25.00 | 25 | 25 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCT............................................................... | 24 | 1 | 1 | 24.00 | 24 | 23 | 1 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCC............................................................... | 24 | 0 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCCT.............................................................. | 25 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCAA.............................................................. | 25 | 2 | 1 | 6.00 | 6 | 5 | 1 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGCT............................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGG................................................................. | 22 | 0 | 1 | 4.00 | 4 | 2 | 2 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCA............................................................... | 24 | 1 | 1 | 4.00 | 4 | 2 | 2 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCAT.............................................................. | 25 | 2 | 1 | 4.00 | 4 | 3 | 1 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCTA.............................................................. | 25 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCAAA............................................................. | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCTT.............................................................. | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGT................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCCTTT............................................................ | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCCC.............................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGCAA.............................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TCCATCTTCCAGTGCAGTGTTGGTAA......................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCTTT............................................................. | 26 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGCA............................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTCTCTGGTAAAGATGGCT............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGTT............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCTC.............................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTCAAGATGGCAA.............................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CACTGTCTGGTAAAGATGGC................................................................ | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................................................................ACTGTCTGGTAAAGATGGCAA.............................................................. | 21 | 2 | 4 | 1.00 | 4 | 2 | 2 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCTAT............................................................. | 26 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................................TAACACCGTCTGGTAAAGATGGCC............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................CTGTCTGGTAAAGATGGC................................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGCC............................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................CTGTCTGGTAAAGATGG................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGCCCAAT........................................................... | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................AACACTGTCTGGTAAAGATGGCTTT............................................................. | 25 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ...............................................................................................................ACTGTCTGGTAAAGATG.................................................................. | 17 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAAAGATGGAAA.............................................................. | 25 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ...........................................................................................................TAACACTGTCTAGTAAAGATGACT............................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TAACACTGTCTGGTAACGATGGCTA.............................................................. | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..................................................................................................................GTCTGGTAAAGATGGC................................................................ | 16 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ............CCTTCTAGGGCTTGATCG.................................................................................................................................................................... | 18 | 2 | 20 | 0.10 | 2 | 0 | 0 | 2 |
| ................................................................................................................CTGTCTGGTAAAGATGGCAA.............................................................. | 20 | 2 | 18 | 0.06 | 1 | 0 | 1 | 0 |
|
GCCGTCGCCGTAGGGAGATCGCGAACTAGCCGCCATCTAGTTAAATACAACCGACTGAGACTCAGGTAGAAGGTCACGTCACAACCTACCAACTTCATGCTTCGAGGATTGTGACAGACCATTTCTACCGGGGGCCCAGTCAAGGGAGTCGTCACTGGAACCTCGGAACTTCTGGTGGCTGCGGAGGTCTGGTT
***********************************...........(((((((((((((.....(((((((((((.((((((((((..((((.........)))).))))))))))))))..))))))).....)))))))).....))))).......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|
| ...............................................................AGGTAGAAGGTCACGTCACAAC............................................................................................................. | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ...............................................................AGGTAGAAGGTCACGTCACAA.............................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ..............................................................AAGGTAGAAGGTCACGTCACAAC............................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 |
| ...........................................................AAAAAGGTAGAAGGTCACGTCACAAC............................................................................................................. | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 |
Generated: 04/30/2015 at 05:44 PM