ID:

rno-mir-140

Coordinate:

chr19:39608951-39609049 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.0 -51.7 -51.5

Sense Strand Reads

GACCTCTCCAGGCTGTGCTTGGTGGGCATCTGGTGTGGCTCCCGCCCTGTGTGTCTCTCTCTGTGTCCTGCCAGTGGTTTTACCCTATGGTAGGTTACATCATGCTGTTCTACCACAGGGTAGAACCACGGACAGGATACTGGAGCACCCTCTGCATCGAAGGACTCCATCTACACAGCCACACACAGCCCAGCAGCCA
********************************************************..((((((((((((((.(((((((((((((.(((((((..(((......)))))))))).))))))))))))))).)))))))).))))....**************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..............................................................................................................TACCACAGGGTAGAACCACGGACA................................................................. 24 0 1 1929.00 1929 1842 43 44
..............................................................................................................TACCACAGGGTAGAACCACGGAC.................................................................. 23 0 1 1887.00 1887 1784 86 17
..............................................................................................................TACCACAGGGTAGAACCACGGAA.................................................................. 23 1 1 1795.00 1795 1760 32 3
...............................................................................................................ACCACAGGGTAGAACCACGGACA................................................................. 23 0 1 1615.00 1615 1528 82 5
..............................................................................................................TACCACAGGGTAGAACCACGGAAA................................................................. 24 1 1 1577.00 1577 1546 26 5
...............................................................................................................ACCACAGGGTAGAACCACGGAC.................................................................. 22 0 1 1412.00 1412 1209 180 23
...............................................................................................................ACCACAGGGTAGAACCACGGAAA................................................................. 23 1 1 1240.00 1240 1225 14 1
..............................................................................................................TACCACAGGGTAGAACCACGGA................................................................... 22 0 1 1147.00 1147 1051 91 5
..............................................................................................................TACCACAGGGTAGAACCACGGACT................................................................. 24 1 1 1019.00 1019 934 62 23
.......................................................................CAGTGGTTTTACCCTATGGTAG.......................................................................................................... 22 0 1 1011.00 1011 967 38 6
...............................................................................................................ACCACAGGGTAGAACCACGGACT................................................................. 23 1 1 985.00 985 777 204 4
..............................................................................................................TACCACAGGGTAGAACCACGGAT.................................................................. 23 1 1 752.00 752 732 20 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAT................................................................. 24 2 1 685.00 685 671 9 5
...............................................................................................................ACCACAGGGTAGAACCACGGA................................................................... 21 0 1 602.00 602 545 48 9
...............................................................................................................ACCACAGGGTAGAACCACGGAA.................................................................. 22 1 1 595.00 595 572 23 0
.......................................................................CAGTGGTTTTACCCTATGGTAGT......................................................................................................... 23 1 1 462.00 462 456 6 0
.......................................................................CAGTGGTTTTACCCTATGGTAA.......................................................................................................... 22 1 1 384.00 384 348 35 1
...............................................................................................................ACCACAGGGTAGAACCACGGAAT................................................................. 23 2 1 360.00 360 351 7 2
...............................................................................................................ACCACAGGGTAGAACCACGGACAA................................................................ 24 1 1 357.00 357 348 9 0
...............................................................................................................ACCACAGGGTAGAACCACGGAT.................................................................. 22 1 1 330.00 330 305 25 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAA................................................................ 24 2 1 253.00 253 250 3 0
.......................................................................CAGTGGTTTTACCCTATGGTAGA......................................................................................................... 23 1 1 246.00 246 239 7 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAA................................................................ 25 2 1 223.00 223 219 4 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAA................................................................ 25 1 1 174.00 174 172 2 0
.......................................................................CAGTGGTTTTACCCTATGGTA........................................................................................................... 21 0 1 163.00 163 148 14 1
..............................................................................................................TACCACAGGGTAGAACCACGGATA................................................................. 24 1 1 156.00 156 150 1 5
..............................................................................................................TACCACAGGGTAGAACCACGGATT................................................................. 24 2 1 152.00 152 130 15 7
...............................................................................................................ACCACAGGGTAGAACCACGGACAT................................................................ 24 1 1 137.00 137 130 7 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAT................................................................ 24 2 1 130.00 130 130 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGATA................................................................. 23 1 1 118.00 118 113 5 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAG................................................................. 24 2 1 117.00 117 116 1 0
..............................................................................................................TACCACAGGGTAGAACCACGG.................................................................... 21 0 1 115.00 115 104 10 1
...............................................................................................................ACCACAGGGTAGAACCACGGACAAA............................................................... 25 2 1 105.00 105 104 1 0
.......................................................................CAGTGGTTTTACCCTATGGTAT.......................................................................................................... 22 1 1 97.00 97 87 10 0
..............................................................................................................TACCACAGGGTAGAACCACGGAGA................................................................. 24 1 1 91.00 91 88 2 1
..............................................................................................................TACCACAGGGTAGAACCACGGATAA................................................................ 25 2 1 67.00 67 66 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAG................................................................. 23 2 1 67.00 67 66 0 1
...............................................................................................................ACCACAGGGTAGAACCACGGACAAT............................................................... 25 2 1 67.00 67 65 2 0
..............................................................................................................TACCACAGGGTAGAACCACGGAG.................................................................. 23 1 1 67.00 67 64 3 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAT................................................................ 25 2 1 66.00 66 66 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAT................................................................ 25 1 1 65.00 65 61 2 2
.......................................................................CAGTGGTTTTACCCTATGGT............................................................................................................ 20 0 1 65.00 65 43 22 0
...............................................................................................................ACCACAGGGTAGAACCACGGATAA................................................................ 24 2 1 64.00 64 61 3 0
................................................................................................................CCACAGGGTAGAACCACGGACA................................................................. 22 0 1 59.00 59 51 7 1
..............................................................................................................TACCACAGGGTAGAACCACGGACG................................................................. 24 1 1 58.00 58 58 0 0
...............................................................................................................ACCACAGGGTAGAACCACGG.................................................................... 20 0 1 55.00 55 50 5 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTAA............................................................... 25 3 1 55.00 55 55 0 0
................................................................................................................CCACAGGGTAGAACCACGGAC.................................................................. 21 0 1 55.00 55 44 11 0
...............................................................................................................ACCACAGGGTAGAACCACGGATT................................................................. 23 2 2 52.50 105 94 10 1
..............................................................................................................TACCACAGGGTAGAACCACGGAAAAA............................................................... 26 3 1 52.00 52 52 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGG......................................................................................................... 23 0 1 52.00 52 52 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAA............................................................... 26 2 1 48.00 48 48 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAAA.............................................................. 26 2 1 48.00 48 47 1 0
.......................................................................CAGTGGTTTTACCCTATGGTAAA......................................................................................................... 23 2 1 47.00 47 44 3 0
...............................................................................................................ACCACAGGGTAGAACCACGGAGA................................................................. 23 1 1 45.00 45 45 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTT........................................................................................................ 24 1 1 42.00 42 41 0 1
...............................................................................................................ACCACAGGGTAGAACCACGGATAT................................................................ 24 2 1 41.00 41 41 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGAA.................................................................. 24 2 1 41.00 41 40 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTA................................................................ 24 2 1 41.00 41 41 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAAA............................................................... 25 3 1 40.00 40 39 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTAT............................................................... 25 3 1 37.00 37 37 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGGA........................................................................................................ 24 1 1 37.00 37 37 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACG................................................................. 23 1 1 36.00 36 36 0 0
................................................................................................................CCACAGGGTAGAACCACGGACT................................................................. 22 1 1 36.00 36 27 9 0
........................................................................AGTGGTTTTACCCTATGGTAG.......................................................................................................... 21 0 1 35.00 35 34 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGAGT................................................................. 24 2 1 33.00 33 33 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTT................................................................ 24 2 1 31.00 31 26 5 0
.............................................................................................................ATACCACAGGGTAGAACCACGGAC.................................................................. 24 1 1 31.00 31 29 2 0
..............................................................................................................TACCACAGGGTAGAACCACGGTA.................................................................. 23 2 1 29.00 29 29 0 0
.................................................................................................................CACAGGGTAGAACCACGGA................................................................... 19 0 1 29.00 29 4 25 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAGA................................................................ 24 3 1 29.00 29 29 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGA................................................................... 23 1 1 28.00 28 25 3 0
..............................................................................................................TACCACAGGGTAGAACCACGGTAT................................................................. 24 3 1 28.00 28 28 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGATAAA............................................................... 25 3 1 28.00 28 28 0 0
................................................................................................................CCACAGGGTAGAACCACGGAAA................................................................. 22 1 1 28.00 28 26 2 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAAT............................................................... 25 3 1 28.00 28 28 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAG.................................................................. 22 1 1 27.00 27 24 2 1
..............................................................................................................TACCACAGGGTAGAACCACGGAAAG................................................................ 25 1 1 27.00 27 27 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTTT............................................................... 25 3 1 26.00 26 19 7 0
..............................................................................................................TACCACAGGGTAGAACCACGGTAA................................................................. 24 2 1 25.00 25 25 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAGT............................................................... 25 1 1 25.00 25 25 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGAAA................................................................. 25 2 1 25.00 25 25 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGGT........................................................................................................ 24 0 1 25.00 25 25 0 0
.................................................................................................................CACAGGGTAGAACCACGGAC.................................................................. 20 0 1 25.00 25 12 13 0
........................................................................AGTGGTTTTACCCTATGGTAGG......................................................................................................... 22 0 1 25.00 25 25 0 0
..................................................................................................................ACAGGGTAGAACCACGGAC.................................................................. 19 0 1 24.00 24 2 22 0
...............................................................................................................ACCACAGGGTAGACCCACGGACA................................................................. 23 1 1 24.00 24 23 0 1
..............................................................................................................TACCACAGGGTAGAACCACGGACTT................................................................ 25 2 1 24.00 24 18 6 0
..............................................................................................................TACCACAGGGTAGAACCACGGACTAA............................................................... 26 3 1 24.00 24 24 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAG................................................................ 24 0 1 24.00 24 24 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTCG....................................................................................................... 25 3 1 24.00 24 0 0 24
...............................................................................................................ACCACAGGGTAGAACCACGGTAA................................................................. 23 2 1 23.00 23 23 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAGA................................................................ 25 3 1 23.00 23 23 0 0
.................................................................................................................CACAGGGTAGAACCACGGACA................................................................. 21 0 1 23.00 23 16 7 0
...............................................................................................................ACCACAGGGTAGAACCACGGACGA................................................................ 24 2 1 22.00 22 22 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAAA.............................................................. 27 2 1 21.00 21 21 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAT............................................................... 26 2 1 21.00 21 21 0 0
..............................................................................................................TACCACAGGGTAGCACCACGGAAA................................................................. 24 2 1 20.00 20 20 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAC................................................................. 24 2 1 20.00 20 20 0 0
...............................................................................................................ACCACAGGGTAGACCCACGGAC.................................................................. 22 1 1 20.00 20 19 1 0
...............................................................................................................ACCACAGGGTAGACCCACGGAAA................................................................. 23 2 1 20.00 20 20 0 0
..................................................................................................................ACAGGGTAGAACCACGGACT................................................................. 20 1 1 19.00 19 1 18 0
..............................................................................................................TACCACAGGGTAGACCCACGGACA................................................................. 24 1 1 19.00 19 18 0 1
......................................................................ACAGTGGTTTTACCCTATGGTAG.......................................................................................................... 23 1 1 19.00 19 19 0 0
...................................................................................................................CAGGGTAGAACCACGGACT................................................................. 19 1 1 19.00 19 1 18 0
..............................................................................................................TACCACAGGGTAGCACCACGGAC.................................................................. 23 1 1 19.00 19 19 0 0
.................................................................................................................CACAGGGTAGAACCACGGACT................................................................. 21 1 1 19.00 19 2 17 0
........................................................................AGTGGTTTTACCCTATGGTAGT......................................................................................................... 22 1 1 19.00 19 19 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAG................................................................ 24 1 1 18.00 18 18 0 0
..............................................................................................................TACCACAGGGTAGACCCACGGAC.................................................................. 23 1 1 18.00 18 17 1 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTA........................................................................................................ 24 2 1 18.00 18 18 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGATAAA............................................................... 26 3 1 18.00 18 18 0 0
..............................................................................................................TACCACAGGGTAGCACCACGGACA................................................................. 24 1 1 18.00 18 17 0 1
.............................................................................................................ATACCACAGGGTAGAACCACGGACA................................................................. 25 1 1 17.00 17 16 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAGA............................................................... 26 2 1 17.00 17 17 0 0
................................................................................................................CCACAGGGTAGAACCACGGACAA................................................................ 23 1 1 17.00 17 17 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGCCA................................................................. 24 1 1 16.00 16 14 0 2
..............................................................................................................TACCACAGGGTAGAACCACGGATAT................................................................ 25 2 1 16.00 16 15 1 0
..................................................................................................................ACAGGGTAGAACCACGGA................................................................... 18 0 1 16.00 16 4 12 0
................................................................................................................CCACAGGGTAGAACCACGGAA.................................................................. 21 1 1 16.00 16 14 2 0
..............................................................................................................TACCACAGGGTAGAACCACGGTT.................................................................. 23 2 1 16.00 16 16 0 0
.......................................................................CAGTGGTTTTACCCTATGGTCG.......................................................................................................... 22 1 1 16.00 16 2 0 14
..............................................................................................................TACCACAGGGTAGAACCACGGCA.................................................................. 23 2 1 15.00 15 15 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAAT.............................................................. 26 3 1 15.00 15 13 2 0
..............................................................................................................TACCACAGGGTAGAACCACGGTTT................................................................. 24 3 1 15.00 15 13 2 0
................................................................................................................CCACAGGGTAGAACCACGGA................................................................... 20 0 1 15.00 15 14 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGACTTT............................................................... 26 3 1 14.00 14 14 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACATT............................................................... 25 2 1 14.00 14 14 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGAAT................................................................. 25 3 1 14.00 14 13 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAAAA.............................................................. 27 3 1 14.00 14 14 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGTAAT................................................................ 24 3 1 13.00 13 13 0 0
...............................................................................................................ACCACAGGGTAGACCCACGGA................................................................... 21 1 1 13.00 13 12 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAGA............................................................... 25 1 1 13.00 13 13 0 0
..............................................................................................................TACCACAGGGTCGAACCACGGAA.................................................................. 23 2 1 13.00 13 13 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACTA................................................................ 25 2 1 13.00 13 13 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGT................................................................... 22 1 1 13.00 13 10 3 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTAAA.............................................................. 26 3 1 13.00 13 13 0 0
..............................................................................................................TACCACAGGGTCGAACCACGGACA................................................................. 24 1 1 12.00 12 12 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAGAA................................................................ 25 2 1 12.00 12 12 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTTT....................................................................................................... 25 1 1 12.00 12 12 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGAA........................................................................................................ 24 2 1 12.00 12 11 1 0
..............................................................................................................TACCACAGGGTAGCACCACGGAA.................................................................. 23 2 1 12.00 12 12 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAATA............................................................... 25 3 1 12.00 12 12 0 0
..........................................................................TGGTTTTACCCTATGGTCG.......................................................................................................... 19 1 1 12.00 12 0 0 12
...............................................................................................................ACCACAGGGTAGAACCACGGAGAA................................................................ 24 2 1 12.00 12 12 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAGA.............................................................. 26 1 1 12.00 12 12 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAGAAA............................................................... 25 3 1 11.00 11 11 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGACT................................................................. 25 2 1 11.00 11 10 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGACGA................................................................ 25 2 1 11.00 11 11 0 0
.................................................................................................................CACAGGGTAGAACCACGGAA.................................................................. 20 1 1 11.00 11 1 10 0
................................................................................................................CCACAGGGTAGAACCACGGAAT................................................................. 22 2 1 11.00 11 11 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACTAT............................................................... 26 3 1 11.00 11 10 1 0
..............................................................................................................TACCACAGGGTAGCACCACGGACT................................................................. 24 2 1 11.00 11 11 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAG................................................................ 25 0 1 11.00 11 11 0 0
..............................................................................................................AACCACAGGGTAGAACCACGGAAA................................................................. 24 2 1 11.00 11 10 1 0
...............................................................................................................ACCACAGGGTAGACCCACGGACT................................................................. 23 2 1 11.00 11 11 0 0
........................................................................AGTGGTTTTACCCTATGGTAGGA........................................................................................................ 23 1 1 11.00 11 11 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGT................................................................... 21 1 1 11.00 11 11 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAC................................................................. 23 2 2 10.50 21 20 1 0
.......................................................................CAGTGGTTTTACCCTATGG............................................................................................................. 19 0 1 10.00 10 8 2 0
.........................................................................GTGGTTTTACCCTATGGTAGT......................................................................................................... 21 1 1 10.00 10 9 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGGAA................................................................. 24 2 1 10.00 10 10 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAG............................................................... 25 1 1 10.00 10 9 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGACATGA.............................................................. 26 1 1 10.00 10 10 0 0
...............................................................................................................ACCACAGGGTAGACCCACGGAAT................................................................. 23 3 1 10.00 10 10 0 0
..............................................................................................................TACCACAGGGTAGCACCACGGAT.................................................................. 23 2 1 10.00 10 10 0 0
..............................................................................................................TACCACAGGGTAGACCCACGGAAA................................................................. 24 2 1 10.00 10 10 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAGT................................................................. 23 2 1 10.00 10 10 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGATG................................................................. 24 2 1 10.00 10 10 0 0
..............................................................................................................TACCACAGGGTAGAACCACG..................................................................... 20 0 1 10.00 10 9 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGTAAA................................................................ 25 3 1 10.00 10 10 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAATA................................................................ 25 3 1 10.00 10 10 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGATTT................................................................ 24 3 2 9.50 19 18 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGAATA................................................................ 24 3 1 9.00 9 9 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAATT................................................................ 25 3 1 9.00 9 9 0 0
..............................................................................................................TACCACAGGGTAGCACCACGGA................................................................... 22 1 1 9.00 9 8 1 0
........................................................................AGTGGTTTTACCCTATGGTAA.......................................................................................................... 21 1 1 9.00 9 9 0 0
...............................................................................................................ACCCCAGGGTAGAACCACGGACA................................................................. 23 1 1 9.00 9 9 0 0
...............................................................................................................ACCACAGGGTCGAACCACGGAAA................................................................. 23 2 1 9.00 9 9 0 0
........................................................................AGTGGTTTTACCCTATGGTAGGT........................................................................................................ 23 0 1 9.00 9 9 0 0
......................................................................ACAGTGGTTTTACCCTATGGTAA.......................................................................................................... 23 2 1 9.00 9 8 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGACATT............................................................... 26 2 1 9.00 9 9 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAGT................................................................ 24 3 3 8.67 26 26 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAAT............................................................... 26 3 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAG............................................................... 26 1 1 8.00 8 8 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACGAT............................................................... 25 3 1 8.00 8 8 0 0
...............................................................................................................ACCACAGGGTAGAAACACGGAAA................................................................. 23 2 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGCCT................................................................. 24 2 1 8.00 8 7 0 1
................................................................................................................CCACAGGGTAGAACCACGGAT.................................................................. 21 1 1 8.00 8 8 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACGT................................................................ 24 2 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTAGACCCACGGACT................................................................. 24 2 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACGT................................................................ 25 2 1 8.00 8 8 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTTA............................................................... 25 3 2 8.00 16 16 0 0
..................................................................................................................ACAGGGTAGAACCACGGACA................................................................. 20 0 1 8.00 8 0 8 0
..............................................................................................................TACCACAGGGGAGAACCACGGAC.................................................................. 23 1 1 8.00 8 8 0 0
...............................................................................................................ACCACAGGGGAGAACCACGGAAA................................................................. 23 2 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTCGAACCACGGAAA................................................................. 24 2 1 8.00 8 7 0 1
...............................................................................................................ACCACAGGGTAGAACCACGGAATT................................................................ 24 3 1 8.00 8 7 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAATA.............................................................. 26 2 1 8.00 8 8 0 0
..............................................................................................................TACCACAGGGTAGACCCACGGAA.................................................................. 23 2 1 7.00 7 7 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGCT.................................................................. 23 2 1 7.00 7 7 0 0
...............................................................................................................ACCCCAGGGTAGAACCACGGAC.................................................................. 22 1 1 7.00 7 7 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGCC.................................................................. 23 1 1 7.00 7 6 0 1
..............................................................................................................TACCACAGGGTAGAACCACGGC................................................................... 22 1 1 7.00 7 6 0 1
..............................................................................................................TACCACAGGGTAGAACCACGGAAGT................................................................ 25 3 2 7.00 14 14 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTAA....................................................................................................... 25 3 1 7.00 7 7 0 0
...............................................................................................................ACCACAGGGTCGAACCACGGAC.................................................................. 22 1 1 7.00 7 7 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACATTT.............................................................. 26 3 1 7.00 7 5 2 0
.................................................................................................................CACAGGGTAGAACCACGGAAA................................................................. 21 1 1 7.00 7 6 1 0
...............................................................................................................ACCACAGGGTAGACCCACGGAA.................................................................. 22 2 1 7.00 7 7 0 0
.............................................................................................................ATACCACAGGGTAGAACCACGGAT.................................................................. 24 2 1 7.00 7 7 0 0
...............................................................................................................ACCACAGGGTAGAAACACGGACA................................................................. 23 1 1 7.00 7 5 2 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTAAA...................................................................................................... 26 3 1 7.00 7 7 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAC.......................................................................................................... 22 1 1 7.00 7 6 1 0
.......................................................................CAGTGGTTTTACCCTATGGTT........................................................................................................... 21 1 1 7.00 7 6 1 0
.......................................................................CAGTGGTTTTAACCTATGGTAG.......................................................................................................... 22 1 1 7.00 7 7 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAAT.............................................................. 27 3 1 7.00 7 7 0 0
.......................................................................CAGTGGTTTTACCCTATGGTACG......................................................................................................... 23 1 1 7.00 7 0 0 7
...............................................................................................................ACCCCAGGGTAGAACCCCGGACA................................................................. 23 2 1 7.00 7 7 0 0
...............................................................................................................ACCCCAGGGTAGAACCACGGAAA................................................................. 23 2 1 7.00 7 7 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGGTCG...................................................................................................... 26 2 1 6.00 6 0 0 6
...............................................................................................................ACCACAGGGTCGAACCACGGACA................................................................. 23 1 1 6.00 6 5 0 1
..............................................................................................................AACCACAGGGTAGAACCACGGAC.................................................................. 23 1 1 6.00 6 5 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGATAAAA.............................................................. 27 3 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGTAGACCCACGGA................................................................... 22 1 1 6.00 6 6 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGAGAT................................................................ 24 2 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGTTA................................................................. 24 2 1 6.00 6 6 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGATG................................................................. 23 2 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGAAGAACCACGGACA................................................................. 24 1 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGATTA................................................................ 25 3 1 6.00 6 6 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGGATCG..................................................................................................... 27 3 1 6.00 6 0 0 6
..............................................................................................................TACCACAGGGTAGAACCACGGATTT................................................................ 25 3 1 6.00 6 6 0 0
....................................................................................................................AGGGTAGAACCACGGA................................................................... 16 0 1 6.00 6 0 6 0
...............................................................................................................ACCACAGGGTAGAACCACGGAAAAGA.............................................................. 26 2 1 6.00 6 6 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAAT......................................................................................................... 23 2 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGTCGAACCACGGA................................................................... 22 1 1 6.00 6 6 0 0
..............................................................................................................AACCACAGGGTAGAACCACGGAA.................................................................. 23 2 1 6.00 6 6 0 0
................................................................................................................CCACAGGGTAGAACCACGGACAT................................................................ 23 1 1 6.00 6 6 0 0
...............................................................................................................ACCACAGGGGAGAACCACGGAC.................................................................. 22 1 1 6.00 6 6 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGGCA................................................................. 24 1 1 6.00 6 6 0 0
..............................................................................................................CACCACAGGGTAGAACCACGGACA................................................................. 24 1 1 6.00 6 5 1 0
...............................................................................................................ACCACAGGGTAGAACCACGGATTA................................................................ 24 3 2 5.50 11 11 0 0
................................................................................................................CCACAGGGTAGAACCACGGAAAA................................................................ 23 2 2 5.50 11 10 1 0
.......................................................................CAGTGGTTTTACCCTATGGTAGAT........................................................................................................ 24 1 1 5.00 5 5 0 0
..................................................................................................................ACAGGGTAGAACCACGGAA.................................................................. 19 1 1 5.00 5 1 4 0
...............................................................................................................ACCACAGGGTAGACCCACGGATA................................................................. 23 2 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGATAAT............................................................... 25 3 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAAAA............................................................. 27 3 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAAAG.............................................................. 26 3 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGTC.................................................................. 23 1 1 5.00 5 4 0 1
.......................................................................CAGAGGTTTTACCCTATGGTAG.......................................................................................................... 22 1 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGGAT................................................................. 24 3 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGAAGAACCACGGAAA................................................................. 23 2 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGTAA.................................................................. 23 2 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGACTAAA.............................................................. 27 3 1 5.00 5 5 0 0
.......................................................................AAGTGGTTTTACCCTATGGTAGGT........................................................................................................ 24 1 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGCACCACGGAAT................................................................. 24 3 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAAGA.............................................................. 27 2 1 5.00 5 5 0 0
................................................................................................................CCACAGGGTAGAACCACGGACG................................................................. 22 1 1 5.00 5 4 1 0
...............................................................................................................ACCACAGGGTAGACCCACGGAT.................................................................. 22 2 1 5.00 5 5 0 0
.........................................................................GTGGTTTTACCCTATGGTAG.......................................................................................................... 20 0 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGATAAT............................................................... 26 3 1 5.00 5 4 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGAATGA............................................................... 26 3 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGCAA................................................................. 24 2 1 5.00 5 4 0 1
...............................................................................................................ACCACAGGGTAGAACCACGGAAAAAA.............................................................. 26 3 1 5.00 5 5 0 0
......................................................................ACAGTGGTTTTACCCTATGGTAGT......................................................................................................... 24 2 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAGAAA............................................................... 26 3 1 5.00 5 5 0 0
....................................................................................................................AGGGTAGAACCACGGAC.................................................................. 17 0 1 5.00 5 0 5 0
...................................................................................................................CAGGGTAGAACCACGGACA................................................................. 19 0 1 5.00 5 0 5 0
..............................................................................................................TACCACAGGGTAGACCCACGGAAT................................................................. 24 3 1 5.00 5 4 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGACAAGT.............................................................. 27 2 1 5.00 5 5 0 0
...............................................................................................................AACACAGGGTAGAACCACGGAC.................................................................. 22 1 1 5.00 5 4 1 0
...............................................................................................................CCCCCAGGGTAGAACCACGGACA................................................................. 23 2 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACTAG............................................................... 25 2 1 5.00 5 5 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGTAAA................................................................ 24 3 1 5.00 5 5 0 0
..............................................................................................................TACCACAGGGTACAACCACGGAC.................................................................. 23 1 1 4.00 4 4 0 0
...............................................................................................................ACCACAGGGTCGAACCACGGACT................................................................. 23 2 1 4.00 4 3 1 0
...............................................................................................................ACCACAGGGTAGATCCACGGACA................................................................. 23 1 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTCGACCCACGGACA................................................................. 24 2 1 4.00 4 4 0 0
................................................................................................................CCACAGGGTAGAACCACGGATAA................................................................ 23 2 1 4.00 4 4 0 0
...............................................................................................................ACCACAGGGTGGAACCACGGAAA................................................................. 23 2 1 4.00 4 4 0 0
.......................................................................CAGTGGTTTTACCATATGGTAG.......................................................................................................... 22 1 1 4.00 4 4 0 0
...............................................................................................................ACCACAGGGTGGAACCACGGACT................................................................. 23 2 1 4.00 4 2 2 0
...............................................................................................................ACCACAGGGTAGAACCACGGACC................................................................. 23 1 1 4.00 4 3 0 1
...................................................................................................................CAGGGTAGAACCACGGA................................................................... 17 0 1 4.00 4 0 4 0
...............................................................................................................ACCACAGGGAAGAACCACGGACA................................................................. 23 1 1 4.00 4 4 0 0
...............................................................................................................ACCACAGGGTTGAACCACGGAAA................................................................. 23 2 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAAAAG............................................................... 26 2 1 4.00 4 4 0 0
.......................................................................CAGTGGTTTTACCCTATGGTAGTGT....................................................................................................... 25 2 1 4.00 4 4 0 0
..............................................................................................................TACAACAGGGTAGAACCACGGAAA................................................................. 24 2 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTCGACCCACGGAC.................................................................. 23 2 1 4.00 4 4 0 0
..............................................................................................................AACCACAGGGTAGAACCACGGA................................................................... 22 1 1 4.00 4 4 0 0
...............................................................................................................ACCACCGGGTAGAACCACGGAC.................................................................. 22 1 1 4.00 4 3 1 0
..............................................................................................................TACCACAGGGTAGAACCACGGACGAAA.............................................................. 27 3 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTAGAACCATGGAC.................................................................. 23 1 1 4.00 4 3 0 1
...............................................................................................................ACCACAGGGTACAACCACGGACA................................................................. 23 1 1 4.00 4 4 0 0
........................................................................AGTGGTTTTACCCTATGGTAGGAAA...................................................................................................... 25 2 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGGA.................................................................. 23 2 1 4.00 4 4 0 0
.......................................................................CAGTGGTTTTACCTTATGGTAG.......................................................................................................... 22 1 1 4.00 4 4 0 0
..............................................................................................................TACCACAGGGTAGAACCACGGAACA................................................................ 25 3 1 4.00 4 4 0 0
...............................................................................................................ACCACAGGGTAGAACCACGGACAATAA............................................................. 27 3 1 4.00 4 4 0 0

Anti-sense strand reads

CTGGAGAGGTCCGACACGAACCACCCGTAGACCACACCGAGGGCGGGACACACAGAGAGAGACACAGGACGGTCACCAAAATGGGATACCATCCAATGTAGTACGACAAGATGGTGTCCCATCTTGGTGCCTGTCCTATGACCTCGTGGGAGACGTAGCTTCCTGAGGTAGATGTGTCGGTGTGTGTCGGGTCGTCGGT
**************************************************..((((((((((((((.(((((((((((((.(((((((..(((......)))))))))).))))))))))))))).)))))))).))))....********************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:39 PM