ID:

rno-mir-136

Coordinate:

chr6:133716761-133716842 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.0

Sense Strand Reads

GCTTCCGCCTGCACCCCACTGTTGCCAGGTGCCTCTTCAACGGTGTTGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTAAGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATGTCGTCGGTTGGAAGGGAGTGTGCTCTGAAGACTGGTAAGATCGG
*************************************************..((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))....***********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
................................................................ACTCCATTTGTTTTGATGATGGA............................................................................................... 23 0 1 4816.00 4816 4724 61 31
................................................................ACTCCATTTGTTTTGATGATGGAA.............................................................................................. 24 1 1 715.00 715 708 5 2
................................................................ACTCCATTTGTTTTGATGATGG................................................................................................ 22 0 1 300.00 300 277 21 2
................................................................ACTCCATTTGTTTTGATGAT.................................................................................................. 20 0 1 141.00 141 141 0 0
................................................................ACTCCATTTGTTTTGATGATGGT............................................................................................... 23 1 1 126.00 126 125 1 0
................................................................ACTCCATTTGTTTTGATGATGGAT.............................................................................................. 24 0 1 96.00 96 96 0 0
.................................................................CTCCATTTGTTTTGATGATGGA............................................................................................... 22 0 1 94.00 94 89 5 0
................................................................ACTCCATTTGTTTTGATGATGGAAA............................................................................................. 25 2 1 87.00 87 82 5 0
..............................................................GGACTCCATTTGTTTTGATGAT.................................................................................................. 22 0 1 71.00 71 71 0 0
................................................................ACTCCATTTGTTTTGATGATG................................................................................................. 21 0 1 69.00 69 61 8 0
.............................................................AGGACTCCATTTGTTTTGATGAT.................................................................................................. 23 0 1 37.00 37 36 0 1
................................................................ACTCCATTTGTTTTGATGCTGGA............................................................................................... 23 1 2 29.00 58 56 1 1
.................................................................CTCCATTTGTTTTGATGATGGAA.............................................................................................. 23 1 1 28.00 28 26 2 0
...................................................................................................ATCATCGTCTCAAATGAGTCT.............................................................. 21 0 1 24.00 24 22 2 0
...............................................................AACTCCATTTGTTTTGATGATGGA............................................................................................... 24 1 1 24.00 24 24 0 0
................................................................ACTCCATTTGTTTTGATGATGCA............................................................................................... 23 1 1 23.00 23 23 0 0
................................................................ACTCCATTTGTTTAGATGATGGA............................................................................................... 23 1 1 23.00 23 23 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTT............................................................. 22 0 1 17.00 17 16 1 0
.....................................................................ATTTGTTTTGATGATGGA............................................................................................... 18 0 1 16.00 16 16 0 0
................................................................ACTCCATTTGTTTCGATGATGGA............................................................................................... 23 1 1 16.00 16 15 0 1
..................................................................................................CATCATCGTCTCAAATGAGTCT.............................................................. 22 0 1 15.00 15 15 0 0
................................................................ACTACATTTGTTTTGATGATGGA............................................................................................... 23 1 1 14.00 14 14 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTT............................................................ 23 1 1 13.00 13 13 0 0
................................................................ACTCCATTTGCTTTGATGATGGA............................................................................................... 23 1 1 12.00 12 12 0 0
................................................................ACTCCATTTGTTTTGATGATGGATCG............................................................................................ 26 2 1 11.00 11 0 0 11
....................................................................................................TCATCGTCTCAAATGAGTCTTT............................................................ 22 1 1 11.00 11 11 0 0
..............................................................GGACTCCATTTGTTTTGATGA................................................................................................... 21 0 1 11.00 11 11 0 0
.................................................................CTCCATTTGTTTTGATGATGG................................................................................................ 21 0 1 11.00 11 3 0 8
................................................................CCTCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 11.00 11 10 0 1
................................................................ACTCCATTTGTCTTGATGATGGA............................................................................................... 23 1 1 9.00 9 9 0 0
................................................................ACTCCATTTGTTTTGAAGATGGA............................................................................................... 23 1 1 9.00 9 8 0 1
................................................................ACTCCATTTGATTTGATGATGGA............................................................................................... 23 1 1 8.00 8 8 0 0
................................................................ACTCCATTTGTATTGATGATGGA............................................................................................... 23 1 1 8.00 8 8 0 0
...............................................................AACTCCATTTGTTTTGATGATGGAA.............................................................................................. 25 2 1 8.00 8 8 0 0
................................................................ACTCCATTTGTTTTGATGATGGTA.............................................................................................. 24 2 1 8.00 8 8 0 0
................................................................ACTCCATTTGTTTTGATGATGAA............................................................................................... 23 1 2 7.50 15 14 1 0
....................................................................................................TCATCGTCTCAAATGAGTCTT............................................................. 21 0 1 7.00 7 6 1 0
................................................................ACTCCATTTGTTTTGATGATGTA............................................................................................... 23 1 1 7.00 7 7 0 0
................................................................ACTCCATTTGTTTTGATGATGGC............................................................................................... 23 1 1 7.00 7 7 0 0
.............................................................AGGACTCCATTTGTTTTGATGA................................................................................................... 22 0 1 7.00 7 7 0 0
..............................................................GGACTCCATTTGTTTTGATGATA................................................................................................. 23 1 1 7.00 7 7 0 0
..................................................................TCCATTTGTTTTGATGATGGA............................................................................................... 21 0 1 7.00 7 7 0 0
....................................................................................................TCATCGTCTCAAATGAGTCTTCT........................................................... 23 1 1 6.00 6 6 0 0
................................................................ACTCCATTTGTTTTAATGATGGA............................................................................................... 23 1 1 6.00 6 6 0 0
................................................................ACTCCATTTGTTTTGATGATGCAA.............................................................................................. 24 2 1 6.00 6 6 0 0
..............................................................AAACTCCATTTGTTTTGATGATGGA............................................................................................... 25 2 1 6.00 6 6 0 0
..............................................................GGACTCCATTTGTTTTGATGATT................................................................................................. 23 1 1 6.00 6 6 0 0
................................................................ACTCCCTTTGTTTTGATGATGGA............................................................................................... 23 1 1 6.00 6 6 0 0
................................................................TCTCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 5.00 5 5 0 0
................................................................ATTCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 5.00 5 5 0 0
................................................................ACTCCATTTGTTTTGATGA................................................................................................... 19 0 1 5.00 5 4 1 0
............................................................CAAAACTCCATTTGTTTTGATGATGGA............................................................................................... 27 3 1 5.00 5 5 0 0
....................................................................CATTTGTTTTGATGATGGA............................................................................................... 19 0 1 5.00 5 4 1 0
................................................................ACTCCATTTGTTTTGATGATTGA............................................................................................... 23 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTCATGATGGA............................................................................................... 23 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGACGATGGA............................................................................................... 23 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGATGGATT............................................................................................. 25 0 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGATCG................................................................................................ 22 1 1 4.00 4 1 0 3
...............................................................AACTCCATTTGTTTTGATGATGG................................................................................................ 23 1 1 4.00 4 3 1 0
................................................................ACTCCATTTGTTTTGATGATGT................................................................................................ 22 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGATGGAAT............................................................................................. 25 1 1 4.00 4 4 0 0
...............................................................CACTCCATTTGTTTTGATGATGGA............................................................................................... 24 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGATGGAC.............................................................................................. 24 1 1 4.00 4 4 0 0
..............................................................GGACTCCATTTGTTTTGATGATTT................................................................................................ 24 2 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGATCGA............................................................................................... 23 1 1 4.00 4 4 0 0
................................................................ACTCCATTTGTTTTGATGCTGGAA.............................................................................................. 24 2 2 3.50 7 7 0 0
................................................................ACTCCATTTGTTTTGATGATGGG............................................................................................... 23 1 1 3.00 3 3 0 0
................................................................ACTCCTTTTGTTTTGATGATGGA............................................................................................... 23 1 1 3.00 3 3 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTAA............................................................ 23 2 1 3.00 3 3 0 0
................................................................ACTCCATTTGTTTTGATGACGGA............................................................................................... 23 1 1 3.00 3 3 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTC............................................................ 23 0 1 3.00 3 3 0 0
................................................................ACTCCATTTGTTTCGATGATGGAA.............................................................................................. 24 2 1 3.00 3 3 0 0
...............................................................GACTCCATTTGTTTTGATGAT.................................................................................................. 21 0 1 3.00 3 3 0 0
..............................................................GGACTCCATTTGTTTTGATG.................................................................................................... 20 0 1 3.00 3 3 0 0
................................................................ACTACATTTGTTTTGATGATGGAA.............................................................................................. 24 2 1 3.00 3 3 0 0
....................................................................................................TCATCGTCTCAAATGAGTCTTC............................................................ 22 0 1 3.00 3 3 0 0
................................................................ACTTCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 3.00 3 3 0 0
................................................................ACCCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 3.00 3 3 0 0
................................................................ACTCCATTTGGTTTGATGATGGA............................................................................................... 23 1 1 3.00 3 2 1 0
..................................................................................................CATCATCGTCTCAAATGAGTCTTAT........................................................... 25 2 1 3.00 3 3 0 0
................................................................ACGCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 3.00 3 3 0 0
................................................................ACTCCATTTGTTTTGATGATGGAAGA............................................................................................ 26 3 1 3.00 3 3 0 0
.................................................................CTCCATTTGTTTTGATGATGGAAA............................................................................................. 24 2 1 3.00 3 3 0 0
................................................................ACACCATTTGTTTTGATGATGGA............................................................................................... 23 1 2 2.50 5 5 0 0
................................................................ACTCCATTTGTTTTGATGATTGAA.............................................................................................. 24 2 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATGCTGGAT.............................................................................................. 24 1 1 2.00 2 2 0 0
................................................................ACTCCATTGGTTTTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
.................................................................CTCCATTTGTTTTGATGATGGT............................................................................................... 22 1 1 2.00 2 2 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTTAA.......................................................... 25 2 1 2.00 2 2 0 0
.................................................................CTCCATTTGTTTTGCTGATGGA............................................................................................... 22 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTCTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................ACTCTATTTGTTTTGATGATGGAA.............................................................................................. 24 2 1 2.00 2 2 0 0
................................................................ACTTCATTTGTTTTGATGATGG................................................................................................ 22 1 1 2.00 2 2 0 0
................................................................ACTCAATTTGTTTTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATGATCGAA.............................................................................................. 24 2 1 2.00 2 2 0 0
................................................................ACTACATTTGTTTTGATGATG................................................................................................. 21 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGCTGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AACTCCATTTGTTTTGATGATGGAAA............................................................................................. 26 3 1 2.00 2 2 0 0
................................................................AGTCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTATGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATGAAGGA............................................................................................... 23 1 1 2.00 2 2 0 0
............................................................AAGGACTCCATTTGTTTTGATGAT.................................................................................................. 24 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGTTGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TCTACATTTGTTTTGATGATGGA............................................................................................... 23 2 1 2.00 2 2 0 0
................................................................ACTCCATTAGTTTTGATGATGTA............................................................................................... 23 2 1 2.00 2 2 0 0
................................................................ACTCCATTCGTTTTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AACTCCATTTGTTTTGATGATGGAT.............................................................................................. 25 1 1 2.00 2 2 0 0
.....................................................................................................CATCGTCTCAAATGAGTCTTCT........................................................... 22 1 1 2.00 2 2 0 0
...............................................................GACTCCATTTGTTTTGATGATG................................................................................................. 22 0 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATCATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATGATGGCA.............................................................................................. 24 2 1 2.00 2 2 0 0
................................................................AATCCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 2.00 2 2 0 0
.............................................................AGGACTCCATTTGTTTTGATGATT................................................................................................. 24 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATTATGGA............................................................................................... 23 1 1 2.00 2 1 1 0
..............................................................GGACTCCATTTGTTTTGATGATAT................................................................................................ 24 2 1 2.00 2 2 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTAT............................................................ 23 2 1 2.00 2 2 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTA............................................................ 23 1 1 2.00 2 2 0 0
................................................................ACTCCATTTGTATTGATGATGGG............................................................................................... 23 2 1 2.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATGATGA................................................................................................ 22 1 2 1.50 3 3 0 0
................................................................ACTCCATTTGTTTTGATGCTGTA............................................................................................... 23 2 2 1.00 2 2 0 0
...................................................................................................ATCATCGTTTCAAATGAGTCT.............................................................. 21 1 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAACTGAGTCT.............................................................. 21 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTAGATGATG................................................................................................. 21 1 1 1.00 1 1 0 0
................................................................ACTCCCTTTGTTTTGATGATGGAAA............................................................................................. 25 3 1 1.00 1 1 0 0
..................................................................TCCATTTGTTTTGATGATGG................................................................................................ 20 0 1 1.00 1 1 0 0
.................................................................ATCCATTTGTTTTGATGATGGA............................................................................................... 22 1 1 1.00 1 1 0 0
................................................................ACTCCAATTGTTTTGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCGTTTGTTTTGATGATGGTA.............................................................................................. 24 3 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATCTA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGGG............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTGGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................GACTCCATTTGTTTTGATGATGT................................................................................................ 23 1 1 1.00 1 1 0 0
.................................................................CTCCGTTTGTTTTGATGATGG................................................................................................ 21 1 1 1.00 1 0 0 1
...............................................................GACTCCATTTGTTTTGATGATGGAAAA............................................................................................ 27 3 1 1.00 1 1 0 0
....................................................................................................TCATCGTCTCAAATGAGTCTTAA........................................................... 23 1 1 1.00 1 1 0 0
..................................................................................................CATCATCGTCTCAAATGAGTCTA............................................................. 23 1 1 1.00 1 1 0 0
................................................................ACTCCCTTTGTTTTGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAAACGAGTCT.............................................................. 21 1 1 1.00 1 1 0 0
................................................................ACTGCATTTGTTTTGATGATGGAT.............................................................................................. 24 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATTATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCATGTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGGTGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTTATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTATTGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
...................................................................CCATTTGTTTTGATGATGGAA.............................................................................................. 21 1 1 1.00 1 1 0 0
................................................................ACTCCAATTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTGCGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................AGGACTCCATTTGTTTTGATGCT.................................................................................................. 23 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATGGAG.............................................................................................. 24 1 1 1.00 1 1 0 0
.................................................................CTCCCTTTGTTTTGATGATGGA............................................................................................... 22 1 1 1.00 1 1 0 0
................................................................ACTCCATATGTTTTGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGATTTGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
.............................................................AGGACTCCATATGTTTTGATGAT.................................................................................................. 23 1 1 1.00 1 1 0 0
....................................................................................................ACATCGTCTCAAATGAGTCTTCTTA......................................................... 25 3 1 1.00 1 1 0 0
................................................................ACTACATTAGTTTTGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCCTTTGTCTTGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTCGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATGGGA.............................................................................................. 24 2 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTAA........................................................... 24 1 1 1.00 1 1 0 0
..............................................................GGACTCCATTTGTTTTGATGAA.................................................................................................. 22 1 1 1.00 1 1 0 0
................................................................ACTCTATTTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACCACATTTGTTTTGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATAATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCGATTTGTTTTGATGATGGT............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATCTGTTTTGATGATGGA............................................................................................... 23 1 2 1.00 2 2 0 0
................................................................ACTCCATTTGTTTAGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
................................................................ACTCCATATGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGACGG................................................................................................ 22 1 1 1.00 1 0 1 0
.....................................................................................................CATCGTCTCAAATGAGTCTTCTAA......................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAAGTGAGTCT.............................................................. 21 1 1 1.00 1 1 0 0
.....................................................................................................CATCGTCTCAAATGAGTCTTCAA.......................................................... 23 1 1 1.00 1 1 0 0
................................................................ACTCCACTTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
....................................................................................................TCATCGTCTCAAATGAGTCTTTT........................................................... 23 2 1 1.00 1 1 0 0
..................................................................................................CATCATCGTCTCAAATGAGTCTT............................................................. 23 0 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATGAAA.............................................................................................. 24 2 2 1.00 2 2 0 0
................................................................ACTCCATTTGTTTTGATTATGGT............................................................................................... 23 2 1 1.00 1 1 0 0
..............................................................GGACTCCATTTGTTTTGAT..................................................................................................... 19 0 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGAAGG................................................................................................ 22 1 1 1.00 1 1 0 0
....................................................................CATTTGTTTTGATGATGGACG............................................................................................. 21 2 4 1.00 4 4 0 0
..................................................................................................CGTCATCGTCTCAAATGAGTCT.............................................................. 22 1 1 1.00 1 1 0 0
.............................................................AGGACTCCATTTGCTTTGATGA................................................................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAAGTGAGTCTTAA........................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................CATCATCGTCTCAAATGAGTCTTT............................................................ 24 1 1 1.00 1 1 0 0
..............................................................GGACTCCATTTGTTTTGATGATGA................................................................................................ 24 1 1 1.00 1 1 0 0
..............................................................GGACTCCATTCGTTTTGATGAT.................................................................................................. 22 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTTATGATGG................................................................................................ 22 1 1 1.00 1 0 1 0
................................................................TCTCCATTTGTTTTGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATGGAAAA............................................................................................ 26 3 1 1.00 1 0 1 0
................................................................ACTCCATTTGTTACGATGATGGAA.............................................................................................. 24 3 1 1.00 1 1 0 0
............................................................AAAAACTCCATTTGTTTTGATGATGGA............................................................................................... 27 3 1 1.00 1 1 0 0
............................................................CAGGACTCCATTTGTTTTGATGATGG................................................................................................ 26 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTATTGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTAGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
................................................................ACTGCATTTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................CTCCATTTGTTTTGATGAT.................................................................................................. 19 0 2 1.00 2 2 0 0
................................................................ACTCCATTTGTTTTGACGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGAAGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTACATTTGCTTTGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTATTGATGATGTA............................................................................................... 23 2 1 1.00 1 1 0 0
....................................................................................................TCATCGTCTCAAATGAGTCTTCAC.......................................................... 24 1 1 1.00 1 1 0 0
...............................................................AACTCCATTTATTTTGATGATGGA............................................................................................... 24 2 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAAATGAGTCTTTT........................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................CATCATCGTCTCAAATGAGTCTTA............................................................ 24 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTAGATGTTGGA............................................................................................... 23 2 2 1.00 2 2 0 0
..................................................................................................CATCATCGTCTCAAATGAGTCA.............................................................. 22 1 1 1.00 1 1 0 0
..................................................................TCCATTTGTTTTGATGATGGAAC............................................................................................. 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGGC............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTAGATGATGTA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTGTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAACTGAGTCTT............................................................. 22 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTATGATGTTGGA............................................................................................... 23 2 1 1.00 1 0 0 1
.............................................................AGGCCTCCATTTGTTTTGATGAT.................................................................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................CTCATCGTCTCAAATGAGTCTT............................................................. 22 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATAG................................................................................................ 22 1 1 1.00 1 1 0 0
....................................................................................................TCATCGTCTCCAATGAGTCTTC............................................................ 22 1 1 1.00 1 1 0 0
................................................................CCTCCATTTGTTTTGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
................................................................ACTACATTTGTTTTGATGATGGAT.............................................................................................. 24 1 1 1.00 1 1 0 0
................................................................ACTCCGTTTGTTTTGATGATGGA............................................................................................... 23 1 1 1.00 1 1 0 0
...................................................................................................ATCATCGTCTCAATTGAGTCT.............................................................. 21 1 1 1.00 1 1 0 0
................................................................ACTACATTTGTTTTGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
.................................................................CTCCATTTGTTTTGCTGATGG................................................................................................ 21 1 1 1.00 1 0 0 1
................................................................ACTCCATTTGTTTTGATGCTGCA............................................................................................... 23 2 2 1.00 2 2 0 0
...................................................................................................ATCATCGTCTTAAATGCGTCT.............................................................. 21 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGCTTTGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGGTTTGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
...............................................................AACTCCATTTGTTTTGATGATG................................................................................................. 22 1 2 1.00 2 1 1 0
................................................................ACTCCATTTGTATTGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGG................................................................................................ 22 1 1 1.00 1 1 0 0
.............................................................CGGACTCCATTTGTTTTGATGATGGA............................................................................................... 26 1 1 1.00 1 1 0 0
..................................................................................................AATCATCGTCTCAAATGAGTCT.............................................................. 22 1 1 1.00 1 1 0 0
...................................................................................................ATCATCTTCTCAAATGAGTCTTT............................................................ 23 2 1 1.00 1 1 0 0
................................................................ACTCCACTTGTTTTGATGAT.................................................................................................. 20 1 1 1.00 1 1 0 0
.............................................................AGGACTCCATTTGTTTTGATGTT.................................................................................................. 23 1 1 1.00 1 1 0 0
..............................................................GGCCTCCATTTGTTTTGATGAT.................................................................................................. 22 1 1 1.00 1 1 0 0
...............................................................GACTCCATTTGTTTTGATGAA.................................................................................................. 21 1 1 1.00 1 1 0 0
...............................................................AAATCCATTTGTTTTGATGATGGA............................................................................................... 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTAATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
..............................................................AAACTCCATTTGTTTTGATGATGG................................................................................................ 24 2 1 1.00 1 1 0 0
.............................................................AGGACTCCATTTGATTTGATGAT.................................................................................................. 23 1 1 1.00 1 1 0 0
.............................................................AGGACTCCATTTGTTTTGATG.................................................................................................... 21 0 1 1.00 1 1 0 0
................................................................ACTCCATTGGTTTCGATGATGGA............................................................................................... 23 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTCGATGATGGT............................................................................................... 23 2 1 1.00 1 1 0 0
..............................................................GGACTCCATTTGTTTTGATGATCAG............................................................................................... 25 3 1 1.00 1 1 0 0
..................................................................................................CATCATCGTCTAAAATGAGTCTTA............................................................ 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTAGATGATGGAA.............................................................................................. 24 2 1 1.00 1 1 0 0
................................................................ACTCCATTTGTTTTGATGCT.................................................................................................. 20 1 3 0.67 2 2 0 0
................................................................ACTCCATCTGTTTTGATGATGG................................................................................................ 22 1 2 0.50 1 1 0 0
................................................................ACTACATTTGTATTGATGATGGA............................................................................................... 23 2 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTTGATGCTGAA............................................................................................... 23 2 4 0.50 2 2 0 0
.................................................................CTCCATTTGTTTTGCTGATGGAA.............................................................................................. 23 2 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATGCT............................................................................................... 23 2 2 0.50 1 1 0 0
................................................................ACTTCATTTGTTTTGATGATGGAA.............................................................................................. 24 2 2 0.50 1 1 0 0
.......................................................................TTGTTTTGATGATGGAT.............................................................................................. 17 0 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTTGAAGATGGC............................................................................................... 23 2 2 0.50 1 1 0 0
............................................................AAAAACTCCATTTGTTTTGATGATGG................................................................................................ 26 3 2 0.50 1 1 0 0
................................................................ACTCCATTTGCTTTGATGATGCA............................................................................................... 23 2 2 0.50 1 1 0 0
................................................................ACTCCATTTGTATTGATGATGAA............................................................................................... 23 2 2 0.50 1 1 0 0
...............................................................AACTCCATTTGTTTTGATGATGGAGA............................................................................................. 26 3 2 0.50 1 1 0 0
..............................................................GGACTCCATTTGTTTTGATGAAT................................................................................................. 23 2 2 0.50 1 1 0 0
...............................................................AACTCCATTTGCTTTGATGATGCAT.............................................................................................. 25 3 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATA................................................................................................. 21 1 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTTGATGGTGGAAA............................................................................................. 25 3 2 0.50 1 1 0 0
................................................................ACTCCCTTTGTTTTGATGAT.................................................................................................. 20 1 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTAGATGCTGGA............................................................................................... 23 2 2 0.50 1 1 0 0
................................................................ACTCCATTTGTTTCGATGTTGGA............................................................................................... 23 2 2 0.50 1 1 0 0
.......................................................................TTGTTTTGATGATGGA............................................................................................... 16 0 9 0.44 4 3 1 0
....................................................................CATTTGTTTTGATGATGGAA.............................................................................................. 20 1 3 0.33 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATTAA............................................................................................... 23 2 3 0.33 1 1 0 0
................................................................ACTTCATTTGTTTTGATGATGGT............................................................................................... 23 2 3 0.33 1 1 0 0
................................................................ACTCCATTTGTTTTGATGATTGAAA............................................................................................. 25 3 3 0.33 1 1 0 0
................................................................ACTCCATTTGATTTGATGAT.................................................................................................. 20 1 3 0.33 1 1 0 0
....................................................................CATTTGTTTTGATGATG................................................................................................. 17 0 3 0.33 1 0 1 0
................................................................ACTCCATTTGTTTCGATGCTGGA............................................................................................... 23 2 3 0.33 1 1 0 0
................................................................ACTCCATTTGCTTTGATGATGGAAA............................................................................................. 25 3 3 0.33 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGGAAA............................................................................................. 25 3 3 0.33 1 1 0 0
................................................................ACTCCCTTTGTTTTGATGATGAA............................................................................................... 23 2 3 0.33 1 1 0 0
...............................................................AACTCCATTTGTTTTGATAATGGA............................................................................................... 24 2 3 0.33 1 1 0 0
..............................................................AAACTCCATTTGTTTTGATGATGGAA.............................................................................................. 26 3 3 0.33 1 1 0 0
................................................................ACTACATTTGTTTTGATGCTGGA............................................................................................... 23 2 3 0.33 1 1 0 0
.....................................................................ATTTGTTTTGATGATGGACTCC........................................................................................... 22 2 3 0.33 1 1 0 0
................................................................AATCCATTTGTTTTGATGCTGGA............................................................................................... 23 2 3 0.33 1 1 0 0
................................................................ACTCCATTTGTTTTGATGCTGC................................................................................................ 22 2 4 0.25 1 1 0 0
................................................................ACTCCATTTGTTTTGGTGCTGGA............................................................................................... 23 2 4 0.25 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGAAA.............................................................................................. 24 3 4 0.25 1 1 0 0
...................................................................................................ATCATCGTCTCAAATGAGGCTTTT........................................................... 24 3 4 0.25 1 1 0 0
................................................................ACTCCATTTGATTTGATGATGGT............................................................................................... 23 2 5 0.20 1 1 0 0
................................................................CCTCCATTTGTTTTGATGATGGGA.............................................................................................. 24 3 5 0.20 1 1 0 0
................................................................ACTCCATTTGTTTTGATGCTGGT............................................................................................... 23 2 5 0.20 1 1 0 0
................................................................TCTTCATTTGTTTTGATGATGGA............................................................................................... 23 2 5 0.20 1 1 0 0
................................................................ACTCCATTTGTCTTGATGATGGCA.............................................................................................. 24 3 6 0.17 1 1 0 0
................................................................ACTCCATTTGATTTGATGATGGAAA............................................................................................. 25 3 6 0.17 1 1 0 0
..............................................................GGACTCCATTTGTCTTGATGATTT................................................................................................ 24 3 6 0.17 1 1 0 0
................................................................TCTCCATTTGTTTTGATGATGGT............................................................................................... 23 2 20 0.15 3 3 0 0
................................................................ACTCCATTTGTTTTAATGATGGCA.............................................................................................. 24 3 9 0.11 1 1 0 0
..............................................................AAACTCCATTTGTTTTGATGA................................................................................................... 21 2 13 0.08 1 1 0 0
............................................................TGGTACTCCATTTGTTTTGATGA................................................................................................... 23 3 13 0.08 1 1 0 0
........................................................................TGTTTTGATGATGGA............................................................................................... 15 0 20 0.05 1 1 0 0

Anti-sense strand reads

CGAAGGCGGACGTGGGGTGACAACGGTCCACGGAGAAGTTGCCACAACCTACTCGGGAGCCTCCTGAGGTAAACAAAACTACTACCTAAGAATTCGAGGTAGTAGCAGAGTTTACTCAGAAGTCTCCCAAGATAGTACAGCAGCCAACCTTCCCTCACACGAGACTTCTGACCATTCTAGCC
***********************************************..((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))....*************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:46 PM