ID:rno-mir-132 |
Coordinate:chr10:62014995-62015095 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
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|
| -43.4 | -42.9 |
 |
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ACACTAGCGCTACCCCCGCCGCCCGCGATGCTGACGTCAGCCTGAAAGCCCCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGCTCCCCACCACTCCCGAGTTCTGCCAGCCTGGGTTTGGGCAGATACAGAGCAA
********************************************************..((((((...((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).))))...)).))))..******************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| ............................................................................................................TAACAGTCTACAGCCATGGTCGT...................................................................... | 23 | 1 | 1 | 28.00 | 28 | 24 | 1 | 3 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCG....................................................................... | 22 | 0 | 1 | 21.00 | 21 | 11 | 0 | 10 |
| .......................................................................AACCGTGGCTTTCGATTGTTAC............................................................................................................ | 22 | 0 | 1 | 18.00 | 18 | 0 | 18 | 0 |
| ........................................................................ACCGTGGCTTTCGATTGTTACTGTGGGACG................................................................................................... | 30 | 2 | 1 | 14.00 | 14 | 0 | 0 | 14 |
| ........................................................................ACCGTGGCTTTCGATTGTTACT........................................................................................................... | 22 | 0 | 1 | 13.00 | 13 | 7 | 6 | 0 |
| .......................................................................AACCGTGGCTTTCGATTGTTA............................................................................................................. | 21 | 0 | 1 | 8.00 | 8 | 0 | 8 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGA...................................................................... | 23 | 1 | 1 | 8.00 | 8 | 7 | 1 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGTA..................................................................... | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .......................................................................AACCGTGGCTTTCGATTGTT.............................................................................................................. | 20 | 0 | 1 | 3.00 | 3 | 0 | 3 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGTT..................................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................CGTGGCTTTCGATTGTTAC............................................................................................................ | 19 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| .............................................................................................................AACAGTCTACAGCCATGGTCGTTT.................................................................... | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................AACAGTCTACAGCCATGGTCGT...................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .......................................................................AACCGTGGCTTTCGATTGTTACT........................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................AACCGTGGCTTTCGATTGTTAAAAT......................................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................AACAGTCTACAGCCATGGTCG....................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCAT...................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCAA...................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................AACCGTGTCTTTCGATTGTTAC............................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................ACCCGTGGCTTTCGATTGTTA............................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...........................................................................GTGGCTTTCGATTGTTA............................................................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGAAT.................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..........................................................................CGTGGCTTTCGATTGTTACT........................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................................GTCTACAGCCATGGTCG....................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................AGCCGTGGCTTTCGATTGTTA............................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................................................TAACAGTCTACAGTCATGGTCG....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAAAAGTCTACAGCCATGGTCG....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGTAA.................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCC....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................AACAGTCTACAGCCATGGTCGTT..................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCT....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGC...................................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................ACAGTGGCTTTCGATTGTTACTGTGGGAAC................................................................................................... | 30 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................AAGCGTGGCTTTCGATTGTTAC............................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...........................................................................GTGGCTTTCGATTGTTACT........................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ........................................................................ACCGTGGCTTTCGATTGTTA............................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ........................................................................ACCGTGGCTTTCGATTGTT.............................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................AACAGTCTACAGCCATGGTCGA...................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................ACCGTGGCTTTCGATTGTTAC............................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGGCG....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ........................................................................ACCGTGGCTTTCGATTGTTACTA.......................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................CCGTGGCTTTCGATTGTTACT........................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................AACCGTGGCTTTCGATT................................................................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ........................................................................AACGTGGCTTTCGATTGTTAC............................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................................................TAACAGTCTAGAGCCATGGTCG....................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGTCT.................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................ACAGTCTACAGCCATGGTCGTTT.................................................................... | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTCGTAT.................................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...................................................................................................................CTACAGCCATGGTCG....................................................................... | 15 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ............................................................................................................TAACAGTCTACAGCCATGGTAA....................................................................... | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...................................................................................................................CTACAGCCATGGTCGT...................................................................... | 16 | 1 | 20 | 0.10 | 2 | 0 | 2 | 0 |
|
TGTGATCGCGATGGGGGCGGCGGGCGCTACGACTGCAGTCGGACTTTCGGGGCGGGGGCGCAGAGGTCCCGTTGGCACCGAAAGCTAACAATGACACCCTTGGCCTCCATTGTCAGATGTCGGTACCAGCGGGGCGTCGTGCGGGTGCGAGGGGTGGTGAGGGCTCAAGACGGTCGGACCCAAACCCGTCTATGTCTCGTT
********************************************************..((((((...((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).))))...)).))))..******************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:32 PM