ID:

rno-mir-106b

Coordinate:

chr12:19307752-19307833 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.1 -47.0 -46.9

Sense Strand Reads

CTGCCACCTCACCTAATGTCCTTCAAGCTGCCTTCTTCCCTCCCACCAGCCCTGCTGGGACTAAAGTGCTGACAGTGCAGATAGTGGTCCTCTCTGTGCTACCGCACTGTGGGTACTTGCTGCTCCAGCAGGGCACATGCAACACCCACGGAGGGAAAGGCTGCTTGAATCCACGAGGGGGT
**********************************************..(((((((((((....(((((((.(((((((((((((.((....)))))).))...))))))).))))))).....)))))))))))..**********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
.............................................................TAAAGTGCTGACAGTGCAGATA................................................................................................... 22 0 1 5653.00 5653 5533 97 23
.............................................................TAAAGTGCTGACAGTGCAGATAA.................................................................................................. 23 1 1 3931.00 3931 3908 7 16
.............................................................TAAAGTGCTGACAGTGCAGAT.................................................................................................... 21 0 1 3574.00 3574 3369 194 11
.............................................................TAAAGTGCTGACAGTGCAGATAT.................................................................................................. 23 1 1 2481.00 2481 2407 66 8
.............................................................TAAAGTGCTGACAGTGCAGATAAA................................................................................................. 24 2 1 912.00 912 905 6 1
.............................................................TAAAGTGCTGACAGTGCAGA..................................................................................................... 20 0 1 736.00 736 695 40 1
.............................................................TAAAGTGCTGACAGTGCAGATAG.................................................................................................. 23 0 1 735.00 735 731 3 1
.............................................................TAAAGTGCTGACAGTGCAGATAGT................................................................................................. 24 0 1 558.00 558 554 4 0
.............................................................TAAAGTGCTGACAGTGCAG...................................................................................................... 19 0 1 308.00 308 295 13 0
.............................................................TAAAGTGCTGACAGTGCAGATT................................................................................................... 22 1 2 254.00 508 484 24 0
.............................................................TAAAGTGCTGACAGTGCAGAAA................................................................................................... 22 1 1 216.00 216 214 2 0
..............................................................AAAGTGCTGACAGTGCAGATA................................................................................................... 21 0 1 210.00 210 209 1 0
.............................................................TAAAGTGCTGACAGTGCAGATAAT................................................................................................. 24 1 1 193.00 193 192 1 0
.............................................................TAAAGTGCTGACAGTGCAGATAAAA................................................................................................ 25 3 1 162.00 162 161 1 0
..............................................................AAAGTGCTGACAGTGCAGATAA.................................................................................................. 22 1 1 156.00 156 155 1 0
.............................................................TAAAGTGCTGACAGTGCAGATAGA................................................................................................. 24 1 1 151.00 151 150 1 0
..............................................................AAAGTGCTGACAGTGCAGAT.................................................................................................... 20 0 1 135.00 135 123 12 0
.............................................................TAAAGTGCTGACAGTGCAGATATT................................................................................................. 24 1 1 126.00 126 119 7 0
...................................................................................................TACCGCACTGTGGGTACTTGCT............................................................. 22 0 1 118.00 118 117 1 0
.....................................................................................................CCGCACTGTGGGTACTTGCTG............................................................ 21 0 1 115.00 115 111 4 0
.............................................................TAAAGTGCTGACAGTGCAGAA.................................................................................................... 21 1 1 110.00 110 100 4 6
............................................................ATAAAGTGCTGACAGTGCAGATA................................................................................................... 23 1 1 99.00 99 97 2 0
.............................................................TAAAGTGCTGACAGTGCAGATGA.................................................................................................. 23 2 1 95.00 95 94 0 1
.....................................................................................................CCGCACTGTGGGTACTTGCTGT........................................................... 22 1 1 93.00 93 91 2 0
............................................................ATAAAGTGCTGACAGTGCAGAT.................................................................................................... 22 1 1 74.00 74 68 6 0
..............................................................AAAGTGCTGACAGTGCAGATAT.................................................................................................. 22 1 1 73.00 73 70 3 0
.............................................................TAAAGTGCTGACAGTGCAGATG................................................................................................... 22 1 1 66.00 66 64 1 1
.............................................................TAAAGTGCTGACAGTGCAGATATA................................................................................................. 24 2 1 65.00 65 64 1 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGA........................................................... 22 1 1 63.00 63 60 3 0
.................................................................GTGCTGACAGTGCAGATA................................................................................................... 18 0 1 59.00 59 47 12 0
.............................................................TAAAGTGCTGACAGTGCAGATTT.................................................................................................. 23 2 2 58.00 116 111 5 0
.............................................................TAAAGTGCTGACAGTGCAGATGT.................................................................................................. 23 2 1 52.00 52 52 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGC........................................................... 22 0 1 50.00 50 35 15 0
.............................................................TAAAGTGCTGACAGTGCAGATAAG................................................................................................. 24 2 1 48.00 48 48 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAA.................................................................................................. 24 2 1 46.00 46 45 1 0
.............................................................TAACGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 45.00 45 45 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCT............................................................. 20 0 1 41.00 41 41 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAAGA................................................................................................ 25 3 1 41.00 41 41 0 0
.............................................................TAAAGTGCTGACAGTGCAGATC................................................................................................... 22 1 1 37.00 37 37 0 0
.............................................................TAACGTGCTGACAGTGCAGATAA.................................................................................................. 23 2 1 36.00 36 36 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTA.................................................................................................. 23 2 3 33.67 101 101 0 0
.............................................................TAACGTGCTGACAGTGCAGAT.................................................................................................... 21 1 1 33.00 33 32 1 0
..............................................................AAAGTGCTGACAGTGCAGATAGT................................................................................................. 23 0 1 32.00 32 31 1 0
.............................................................TAAAGTGCTGACAGTGCAGATATTT................................................................................................ 25 2 1 32.00 32 31 1 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAA.......................................................... 23 2 1 31.00 31 29 2 0
.............................................................TAAAGTGCTGACAGTGCAGAAAA.................................................................................................. 23 2 2 31.00 62 62 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAT.................................................................................................. 24 2 1 30.00 30 24 6 0
.............................................................TAAAGTGCTGACAGTGCAGT..................................................................................................... 20 1 1 30.00 30 30 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAAA......................................................... 24 3 1 29.00 29 29 0 0
.............................................................TAAAGTGCTGACAGTGCAGATCA.................................................................................................. 23 2 1 25.00 25 25 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCA.......................................................... 23 1 1 25.00 25 24 1 0
..............................................................AAAGTGCTGACAGTGCAGA..................................................................................................... 19 0 1 24.00 24 22 2 0
...............................................................AAGTGCTGACAGTGCAGATA................................................................................................... 20 0 1 23.00 23 22 1 0
.............................................................TAAAGTGCTGAAAGTGCAGATA................................................................................................... 22 1 1 21.00 21 21 0 0
.................................................................GTGCTGACAGTGCAGAT.................................................................................................... 17 0 1 21.00 21 7 14 0
.............................................................TAAAGTGCTGACAGTGCAGATAAAT................................................................................................ 25 3 2 20.50 41 41 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCT............................................................. 21 0 1 20.00 20 15 0 5
.............................................................TAAAGTGCTGACAGTGCAGAAAT.................................................................................................. 23 2 1 20.00 20 20 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTA............................................................ 23 1 1 20.00 20 20 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCAA......................................................... 24 2 1 19.00 19 19 0 0
..............................................................AAAGTGCTGACAGTGCAGATAG.................................................................................................. 22 0 1 19.00 19 18 1 0
.............................................................TAAAGTGCTGACAGTGCAGATATAT................................................................................................ 25 3 1 18.00 18 18 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGTAA......................................................... 24 3 2 17.00 34 34 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCTG............................................................ 22 0 1 17.00 17 17 0 0
.............................................................TAAAGGGCTGACAGTGCAGATA................................................................................................... 22 1 1 16.00 16 16 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCAT......................................................... 24 2 1 16.00 16 16 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAAC................................................................................................. 24 2 1 16.00 16 16 0 0
..............................................................AAAGTGCTGACAGTGCAGATAAA................................................................................................. 23 2 2 16.00 32 31 1 0
.............................................................TAACGTGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 16.00 16 16 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAAGT................................................................................................ 25 3 1 15.00 15 15 0 0
.............................................................TAAAGTGCTGACAGTGCAGATCT.................................................................................................. 23 2 1 15.00 15 15 0 0
............................................................ATAAAGTGCTGACAGTGCAGA..................................................................................................... 21 1 1 15.00 15 11 4 0
..............................................................AAAGTGCTGACAGTGCAGATAAT................................................................................................. 23 1 1 14.00 14 14 0 0
..............................................................AAAGTGCTGACAGTGCAGATAGA................................................................................................. 23 1 1 14.00 14 14 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAC.................................................................................................. 23 1 1 14.00 14 14 0 0
..............................................................AAAGTGCTGACAGTGCAGAAA................................................................................................... 21 1 1 14.00 14 14 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCT.......................................................... 23 0 1 14.00 14 14 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTA................................................................................................ 25 1 1 14.00 14 14 0 0
.............................................................TAAAGTGCTGACAGTGCAGATATAA................................................................................................ 25 3 2 13.50 27 27 0 0
...........................................................AATAAAGTGCTGACAGTGCAGATA................................................................................................... 24 1 1 13.00 13 13 0 0
...............................................................AAGTGCTGACAGTGCAGATAA.................................................................................................. 21 1 1 13.00 13 13 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTG............................................................ 23 0 1 13.00 13 13 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAG.................................................................................................. 24 1 1 13.00 13 13 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTAA................................................................................................. 24 3 4 12.50 50 50 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTAT................................................................................................. 24 2 2 12.00 24 23 0 1
.............................................................TAAAGTGCTGCCAGTGCAGATAA.................................................................................................. 23 2 1 12.00 12 12 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTAA........................................................... 24 2 1 12.00 12 12 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTT............................................................ 23 1 1 11.00 11 11 0 0
.............................................................TAAAGTGCTGAAAGTGCAGATAT.................................................................................................. 23 2 1 11.00 11 11 0 0
.............................................................TAAAGTGCTGACAGTGCAAA..................................................................................................... 20 1 1 11.00 11 11 0 0
...................................................................................................TACCGCACTGTGGGTACTTGC.............................................................. 21 0 1 11.00 11 11 0 0
.............................................................TAAAGCGCTGACAGTGCAGATA................................................................................................... 22 1 1 11.00 11 11 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTTT................................................................................................. 24 2 2 10.50 21 19 2 0
.............................................................TAAAGGGCTGACAGTGCAGATAA.................................................................................................. 23 2 1 10.00 10 10 0 0
.....................................................................................................CCGCACTGTGGGTACTTGC.............................................................. 19 0 1 10.00 10 10 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTT................................................................................................ 25 1 1 10.00 10 10 0 0
................................................................AGTGCTGACAGTGCAGATA................................................................................................... 19 0 1 10.00 10 7 3 0
.............................................................TAAAGTGCTGACAGTGCAGATAAAG................................................................................................ 25 2 1 10.00 10 10 0 0
...............................................................AAGTGCTGACAGTGCAGAT.................................................................................................... 19 0 1 10.00 10 9 1 0
..............................................................AAAGTGCTGACAGTGCAGATT................................................................................................... 21 1 3 9.00 27 26 1 0
.............................................................TAAAGTGCTGACAGTGCAA...................................................................................................... 19 1 4 9.00 36 36 0 0
.............................................................TAAAGTGCTGACAGCGCAGATA................................................................................................... 22 1 1 9.00 9 8 1 0
...............................................................AAGTGCTGACAGTGCAGATAT.................................................................................................. 21 1 1 9.00 9 9 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGAA................................................................................................ 25 2 1 9.00 9 9 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTG.................................................................................................. 23 1 1 9.00 9 9 0 0
...........................................................AATAAAGTGCTGACAGTGCAGAT.................................................................................................... 23 1 1 9.00 9 8 1 0
.............................................................TAAAGTGCTGACAGTGCAGAGA................................................................................................... 22 1 1 9.00 9 9 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCTGT........................................................... 23 1 1 9.00 9 9 0 0
.............................................................CAAAGTGCTGACAGTGCAGAT.................................................................................................... 21 1 1 8.00 8 8 0 0
.............................................................TAAAGTGCTGACAGTGCAGGTAG.................................................................................................. 23 1 1 8.00 8 8 0 0
.............................................................TAAAGTGCTGCCAGTGCAGATA................................................................................................... 22 1 1 8.00 8 8 0 0
.............................................................TAAAGTGCTGACAGCGCAGAT.................................................................................................... 21 1 1 8.00 8 8 0 0
............................................................ATAAAGTGCTGACAGTGCAG...................................................................................................... 20 1 1 8.00 8 7 1 0
..............................................................AAAGTGCTGACAGTGCAG...................................................................................................... 18 0 1 8.00 8 8 0 0
.............................................................TAAAGTGCTGAAAGTGCAGATAG.................................................................................................. 23 1 1 8.00 8 8 0 0
.............................................................TAAAGTGCTGACAGTGCAGAAT................................................................................................... 22 2 3 8.00 24 24 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGTA.......................................................... 23 2 1 7.00 7 7 0 0
..............................................................AAAGTGCTGACAGTGCAGATATT................................................................................................. 23 1 1 7.00 7 7 0 0
.............................................................TAAAGTGCTGACAATGCAGATAA.................................................................................................. 23 2 1 7.00 7 6 0 1
.............................................................TAAAGTGCTGACAGTGCAGATAGTTT............................................................................................... 26 2 1 7.00 7 7 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAAT......................................................... 24 3 1 7.00 7 7 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAATT................................................................................................ 25 2 1 7.00 7 7 0 0
..........................................................AAATAAAGTGCTGACAGTGCAGATA................................................................................................... 25 2 1 7.00 7 7 0 0
.............................................................TAAAGTGCTGACAGCGCAGATAA.................................................................................................. 23 2 1 7.00 7 6 0 1
...........................................................AATAAAGTGCTGACAGTGCAGATAA.................................................................................................. 25 2 1 7.00 7 7 0 0
.............................................................TAAAGTGCTGACAGTGCAGATCG.................................................................................................. 23 1 1 7.00 7 4 0 3
...............................................................AAGTGCTGACAGTGCAGATAAT................................................................................................. 22 1 1 7.00 7 7 0 0
.............................................................TAAAGTGCTGACAGTGCAGATATTA................................................................................................ 25 2 1 7.00 7 7 0 0
.................................................................GTGCTGACAGTGCAGATAA.................................................................................................. 19 1 3 6.33 19 18 1 0
.............................................................TAAAGTGCTGACAGTGCAGATCGT................................................................................................. 24 1 1 6.00 6 6 0 0
.............................................................TAAAGTGCCGACAGTGCAGATAA.................................................................................................. 23 2 1 6.00 6 6 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAGA......................................................... 24 3 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGGCAGTGCAGATA................................................................................................... 22 1 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGACACTGCAGATAA.................................................................................................. 23 2 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGACAGAGCAGATA................................................................................................... 22 1 1 6.00 6 6 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAAA................................................................................................. 25 3 3 6.00 18 18 0 0
.............................................................TAAAGTGCTGAAAGTGCAGATAA.................................................................................................. 23 2 1 6.00 6 6 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAG.......................................................... 23 2 1 6.00 6 6 0 0
.................................................................GTGCTGACAGTGCAGA..................................................................................................... 16 0 1 6.00 6 0 6 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGTT.......................................................... 23 1 1 6.00 6 6 0 0
..............................................................AAAGTGCTGACAGTGCAGATATA................................................................................................. 23 2 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAATA................................................................................................ 25 2 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGAAAGTGCAGAT.................................................................................................... 21 1 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGACAATGCAGATA................................................................................................... 22 1 1 6.00 6 6 0 0
.............................................................TAAAGTGCTGACAGCGCAGATAT.................................................................................................. 23 2 1 6.00 6 5 1 0
.............................................................TAAAGTGCTGACAATGCAGATAT.................................................................................................. 23 2 2 5.50 11 11 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAGT................................................................................................. 25 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAAAGT............................................................................................... 26 3 1 5.00 5 5 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCAAT........................................................ 25 3 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGAAAT.............................................................................................. 27 3 1 5.00 5 5 0 0
................................................................AGTGCTGACAGTGCAGAT.................................................................................................... 18 0 1 5.00 5 5 0 0
.............................................................TAACGTGCTGACAGTGCAGATAGT................................................................................................. 24 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGAGCAGATAA.................................................................................................. 23 2 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAATGCAGATAG.................................................................................................. 23 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGCCAGTGCAGAT.................................................................................................... 21 1 2 5.00 10 9 1 0
.............................................................TAAAGTGCTGCCAGTGCAGATAT.................................................................................................. 23 2 1 5.00 5 5 0 0
...........................................................AATAAAGTGCTGACAGTGCAG...................................................................................................... 21 1 1 5.00 5 5 0 0
.............................................................TAAAGTTCTGACAGTGCAGATA................................................................................................... 22 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGGTAA.................................................................................................. 23 2 1 5.00 5 5 0 0
..............................................................AAAGTGCTGACAGTGCAGATAGAT................................................................................................ 24 2 1 5.00 5 5 0 0
.............................................................TAACGTGCTGACAGTGCAGATAG.................................................................................................. 23 1 1 5.00 5 5 0 0
.............................................................AAAAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 5.00 5 5 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTAT........................................................... 24 2 1 5.00 5 5 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTGT........................................................... 24 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAATTT............................................................................................... 26 3 1 5.00 5 5 0 0
............................................................TTAAAGTGCTGACAGTGCAGA..................................................................................................... 21 1 1 5.00 5 5 0 0
.............................................................TACAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCA....................................................................................................... 18 0 1 5.00 5 4 1 0
.............................................................TAAAGTCCTGACAGTGCAGATAT.................................................................................................. 23 2 1 5.00 5 5 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCTGA........................................................... 23 1 1 5.00 5 5 0 0
.............................................................TAAAGTGCCGACAGTGCAGATA................................................................................................... 22 1 1 5.00 5 4 1 0
.............................................................TAAAGTGCTGCCAGTGCAGATAG.................................................................................................. 23 1 1 5.00 5 5 0 0
.............................................................TACCGTGCTGACAGTGCAGAT.................................................................................................... 21 2 2 5.00 10 10 0 0
.............................................................TAAAGCGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 5.00 5 5 0 0
...................................................................GCTGACAGTGCAGATA................................................................................................... 16 0 2 4.50 9 3 6 0
.............................................................TAAAGTGCTGACAGTGCAGATTGA................................................................................................. 24 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGGGCAGATAT.................................................................................................. 23 2 1 4.00 4 4 0 0
.............................................................TAAAGAGCTGACAGTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGGGCAGATA................................................................................................... 22 1 1 4.00 4 3 1 0
.............................................................TAAAGTGCTGACAATGCAGAT.................................................................................................... 21 1 2 4.00 8 8 0 0
.........................................................AAAATAAAGTGCTGACAGTGCAGATA................................................................................................... 26 3 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACACTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTGCATATA................................................................................................... 22 1 1 4.00 4 3 0 1
............................................................ATAAAGTGCTGACAGTGCAGATAAT................................................................................................. 25 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGATAGTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................TACCGTGCTGACAGTGCAGATA................................................................................................... 22 2 2 4.00 8 8 0 0
.............................................................TAAAGTGCTGACAGTGCAGTAA................................................................................................... 22 2 2 4.00 8 8 0 0
.............................................................TAAGGTGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTG................................................................................................ 25 0 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTTCAGAT.................................................................................................... 21 1 1 4.00 4 3 1 0
.................................................................GTGCTGACAGTGCAGATAG.................................................................................................. 19 0 1 4.00 4 3 1 0
.............................................................TAAAGTGCTGACAGTGCAGAAAG.................................................................................................. 23 1 1 4.00 4 4 0 0
.............................................................TAAAGCGCTGACAGTGCAGAT.................................................................................................... 21 1 1 4.00 4 4 0 0
.............................................................TATAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGGCAGTGCAGAT.................................................................................................... 21 1 1 4.00 4 3 1 0
.............................................................TAAAGTGCTGACAGTGCAGATGAT................................................................................................. 24 2 1 4.00 4 4 0 0
......................................................................................................CGCACTGTGGGTACTTGCTG............................................................ 20 0 1 4.00 4 4 0 0
.............................................................TAAAGGGCTGACAGTGCAGATAGT................................................................................................. 24 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTGCAGATACA................................................................................................. 24 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACACTGCAGAT.................................................................................................... 21 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACATTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
......................................................................................................CGCACTGTGGGTACTTGCTGCAA......................................................... 23 2 1 4.00 4 4 0 0
...............................................................AAGTGCTGACAGTGCAGATAGTA................................................................................................ 23 1 1 4.00 4 4 0 0
.............................................................TAGCGTGCTGACAGTGCAGATA................................................................................................... 22 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGAAAGTGCAGA..................................................................................................... 20 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTAT............................................................................................... 26 2 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACAGTCCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................TAAAGTGCTGACACTGCAGATAT.................................................................................................. 23 2 1 4.00 4 4 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGAT.......................................................... 23 1 1 4.00 4 4 0 0
.............................................................TAAAGGGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 4.00 4 4 0 0
.............................................................TAAAGTGTTGACAGTGCAGATA................................................................................................... 22 1 1 4.00 4 4 0 0
..................................................................TGCTGACAGTGCAGATA................................................................................................... 17 0 1 4.00 4 2 2 0
.............................................................TACAGTGCTGACAGTGCAGAT.................................................................................................... 21 1 1 4.00 4 3 1 0
.............................................................TAAAGTGCTGACAGTGCAGATGAA................................................................................................. 24 3 3 3.67 11 11 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGAAA............................................................................................... 26 3 2 3.50 7 7 0 0
.............................................................TATCGTGCTGACAGTGCAGATA................................................................................................... 22 2 1 3.00 3 3 0 0
...................................................................................................TACCGCACTGTGGGTACTTGAT............................................................. 22 1 1 3.00 3 3 0 0
.............................................................TAAGGTGCTGACAGTGCAGATAA.................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................TAAAGCGCTGACAGTGCAGATAA.................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGGAGAT.................................................................................................... 21 1 1 3.00 3 3 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCTGCAA......................................................... 25 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGGAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTAACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
.............................................................TAAAGTGATGACAGTGCAGATAA.................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGAGAGTGCAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
.............................................................CAAAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 2 1 0
.............................................................TAAAGTCCTGACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
...................................................................................................TACCGCACTGTGGGTACTTG............................................................... 20 0 1 3.00 3 3 0 0
.............................................................TAGAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 2 1 0
....................................................................................................ACCGCACTGTGGGTACTTGCTAA........................................................... 23 2 1 3.00 3 3 0 0
.............................................................TGAAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 2 1 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCTAA........................................................ 25 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGCAGAC.................................................................................................... 21 1 1 3.00 3 3 0 0
.................................................................GTGCTGACAGTGCAGATCG.................................................................................................. 19 1 2 3.00 6 0 0 6
....................................................................................................ACCGCACTGTGGGTACTTGCTGC........................................................... 23 0 1 3.00 3 2 1 0
.............................................................TAAAGTGCTGACAGTGCAGATATAGA............................................................................................... 26 3 1 3.00 3 3 0 0
.............................................................TAACGTGCTGACAGTGCAGA..................................................................................................... 20 1 1 3.00 3 3 0 0
...........................................................ATTAAAGTGCTGACAGTGCAG...................................................................................................... 21 1 1 3.00 3 3 0 0
.............................................................TAACGTGCTGACAGTGCAG...................................................................................................... 19 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTGGT.............................................................................................. 27 0 1 3.00 3 3 0 0
.............................................................TAAAGGGCTGACAGTGCAGAT.................................................................................................... 21 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGCAGAAG................................................................................................... 22 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTTACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGTAGAT.................................................................................................... 21 1 1 3.00 3 1 2 0
.............................................................TATAGTGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 3.00 3 2 1 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCTT......................................................... 24 1 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTG............................................................... 18 0 1 3.00 3 3 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCAA............................................................ 23 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGCAGATGGT................................................................................................. 24 1 1 3.00 3 3 0 0
......................................................................................................CGCACTGTGGGTACTTGCTGT........................................................... 21 1 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTA............................................................ 21 1 1 3.00 3 3 0 0
......................................................................................................CGCACTGTGGGTACTTGCTGC........................................................... 21 0 1 3.00 3 3 0 0
............................................................ATAAAGTGCTGACAGTGCAGATAGTT................................................................................................ 26 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGGCAGTGCAGATAA.................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTGCAAAT.................................................................................................... 21 1 1 3.00 3 3 0 0
.............................................................GAAAGTGCTGACAGTGCAGATA................................................................................................... 22 1 1 3.00 3 3 0 0
...................................................................................................TACCGCACTGTGGGTACTTA............................................................... 20 1 1 3.00 3 3 0 0
.............................................................TGAAGTGCTGACAGTGCAGATAT.................................................................................................. 23 2 1 3.00 3 2 1 0
..................................................................TGCTGACAGTGCAGATAG.................................................................................................. 18 0 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGTTT......................................................... 24 2 1 3.00 3 3 0 0
....................................................................................................ACCGCACTGTGGGTACTTGCTGAA.......................................................... 24 2 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCAAA........................................................ 25 3 1 3.00 3 3 0 0
......................................................................................................CGCACTGTGGGTACTTGCT............................................................. 19 0 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCATT........................................................ 25 3 1 3.00 3 3 0 0
.............................................................TAATGTGCTGACAGTGCAGAT.................................................................................................... 21 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGCCAGTGCAGATAGT................................................................................................. 24 1 1 3.00 3 3 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCA............................................................. 20 1 1 3.00 3 3 0 0
..............................................................AAAGTGCTGACAGTGCAGAA.................................................................................................... 20 1 1 3.00 3 3 0 0
.............................................................TAAAGTGCTGACAGTACAGAT.................................................................................................... 21 1 1 3.00 3 3 0 0
..............................................................AAAGTGCTGACAGTGCAGATAC.................................................................................................. 22 1 1 3.00 3 3 0 0
.............................................................TAACGTGCTGACAGTGCAGATAAA................................................................................................. 24 3 3 2.67 8 8 0 0
............................................................ATAAAGTGCTGACAGTGCAGATT................................................................................................... 23 2 3 2.67 8 5 3 0
.............................................................TAAAGTGCTGACAGTGAAGATA................................................................................................... 22 1 2 2.50 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAAAGA............................................................................................... 26 3 2 2.50 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGTA.................................................................................................... 21 2 2 2.50 5 5 0 0
.............................................................TAACGTGCTGACAGTGCAGATT................................................................................................... 22 2 2 2.50 5 5 0 0
.............................................................TAAAGTGCTGACAGTGCAGATTTTT................................................................................................ 25 3 2 2.50 5 5 0 0
..............................................................AAAGTGCTGACAGTGCAGATAAAT................................................................................................ 24 3 5 2.40 12 12 0 0
.............................................................TAAAGTGCTGACAGTGCAGAAAAA................................................................................................. 24 3 5 2.20 11 10 1 0
..........................................................TATTAAAGTGCTGACAGTGCAGA..................................................................................................... 23 2 1 2.00 2 2 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCTAT........................................................ 25 2 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGACAGTGCAGATATG................................................................................................. 24 2 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGACAGTGCAGCTAA.................................................................................................. 23 2 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGAAAGTGCAGATC................................................................................................... 22 2 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGACAGTGCTGATAT.................................................................................................. 23 2 1 2.00 2 2 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGTAG......................................................... 24 3 1 2.00 2 2 0 0
............................................................ATAAAGTGCTGACAGTGCAGATG................................................................................................... 23 2 2 2.00 4 4 0 0
.............................................................TAAAGTGCAGACAGTGCAGAT.................................................................................................... 21 1 1 2.00 2 2 0 0
.........................................................AAAATAAAGTGCTGACAGTGCAGAT.................................................................................................... 25 3 2 2.00 4 4 0 0
...........................................................AATAAAGTGCTGACAGTGCAGA..................................................................................................... 22 1 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGACAGGGCAGAT.................................................................................................... 21 1 1 2.00 2 2 0 0
..............................................................AAAGCGCTGACAGTGCAGATA................................................................................................... 21 1 1 2.00 2 2 0 0
.............................................................CAAAGTGCTGACAGTGCAGATAA.................................................................................................. 23 2 1 2.00 2 2 0 0
.............................................................TAAAGTGCTGACAGTGCAGATAGTGT............................................................................................... 26 1 1 2.00 2 2 0 0
...................................................................................................TACCGCACTGTGGGTACTTGCTAAA.......................................................... 25 3 1 2.00 2 2 0 0
......................................................................................................CGCACTGTGGGTACTTGCTGCTAA........................................................ 24 2 1 2.00 2 2 0 0
.....................................................................................................CCGCACTGTGGGTACTTGCTGCATTA....................................................... 26 3 1 2.00 2 2 0 0
...................................................................GCTGACAGTGCAGATAGT................................................................................................. 18 0 1 2.00 2 0 2 0
.............................................................TAAAGTGCTGACAGTGCAGATGTT................................................................................................. 24 2 1 2.00 2 2 0 0
................................................................AGTGCTGACAGTGCAGATAA.................................................................................................. 20 1 2 2.00 4 3 1 0
.............................................................TAAAGTGCTGACAGTGCAGATAGAG................................................................................................ 25 1 1 2.00 2 2 0 0

Anti-sense strand reads

GACGGTGGAGTGGATTACAGGAAGTTCGACGGAAGAAGGGAGGGTGGTCGGGACGACCCTGATTTCACGACTGTCACGTCTATCACCAGGAGAGACACGATGGCGTGACACCCATGAACGACGAGGTCGTCCCGTGTACGTTGTGGGTGCCTCCCTTTCCGACGAACTTAGGTGCTCCCCCA
**********************************************..(((((((((((....(((((((.(((((((((((((.((....)))))).))...))))))).))))))).....)))))))))))..**********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:34 PM