ID:

rno-mir-103-2

 Coordinate:

chr3:123833671-123833756 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-31.8 -31.8 -31.8
mature
  1. chr10:20606766-20606788 +
  2. chr3:123833722-123833744 +
star

Sense Strand Reads

GAGCGGTCAGAGGAAGGCCCACCTTGGTTCTTCTCCACCTCAGCAGAGCTGTCTTCGTGCTTTCAGCTTCTTTACAGTGCTGCCTTGTAGCATTCAGGTCAAGCAGCATTGTACAGGGCTATGAAAGAACCAAGAATGGGCTGCCCTTAAGGAAAGAGGATCTAGGATCCAGTTGGTGCAGCTTTA
*************************************************..((((.((.(((((((((.((.(((((((((((((((.......))))....))))))))))).)))))..)))))).)).))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
.....................................................................................................AGCAGCATTGTACAGGGCTATGA.............................................................. 23 0 2 20596.50 41193 40653 311 229
.....................................................................................................AGCAGCATTGTACAGGGCTATGAT............................................................. 24 1 2 1766.00 3532 3502 6 24
.....................................................................................................AGCAGCATTGTACAGGGCTATGAA............................................................. 24 0 2 1614.50 3229 3221 1 7
.....................................................................................................AGCAGCATTGTACAGGGCTATGT.............................................................. 23 1 2 1493.00 2986 2947 4 35
.....................................................................................................AGCAGCATTGTACAGGGCTATG............................................................... 22 0 2 572.50 1145 1125 0 20
.....................................................................................................AGCAGCATTGTACAGGGCTAT................................................................ 21 0 3 517.33 1552 1435 9 108
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAA............................................................ 25 0 1 479.00 479 477 0 2
................................................................AGCTTCTTTACAGTGCTGCCTTGA.................................................................................................. 24 1 1 402.00 402 393 9 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAA.............................................................. 23 1 3 381.00 1143 1134 5 4
.....................................................................................................AGCAGCATTGTACCGGGCTATGA.............................................................. 23 1 2 350.50 701 694 7 0
......................................................................................................GCAGCATTGTACAGGGCTATGA.............................................................. 22 0 2 334.00 668 642 10 16
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAT............................................................ 25 1 2 190.50 381 380 1 0
.........................................................................................................GCATTGTACAGGGCTATGA.............................................................. 19 0 2 182.00 364 355 9 0
.....................................................................................................AGCCGCATTGTACAGGGCTATGA.............................................................. 23 1 2 179.50 359 353 6 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGA.............................................................. 24 0 2 154.00 308 301 0 7
.....................................................................................................AGCAGCATTGTCCAGGGCTATGA.............................................................. 23 1 2 151.00 302 299 3 0
.......................................................................................................CAGCATTGTACAGGGCTATGA.............................................................. 21 0 2 109.00 218 211 4 3
.....................................................................................................AGCAGCATTGTACAGGGCTATGAG............................................................. 24 1 2 99.00 198 198 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGATT............................................................ 25 2 2 97.00 194 193 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGTA............................................................. 24 1 2 94.00 188 188 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGTT............................................................. 24 2 2 86.00 172 167 1 4
.....................................................................................................AGCAGCATTGTACAGGGCTATAT.............................................................. 23 2 3 80.67 242 241 1 0
.....................................................................................................AGCAGCATTGTACAGGGCTATA............................................................... 22 1 3 76.00 228 226 0 2
.....................................................................................................AGCAGCATTGTACTGGGCTATGA.............................................................. 23 1 2 71.00 142 142 0 0
.....................................................................................................AGCAGCATTGCACAGGGCTATGA.............................................................. 23 1 2 70.00 140 139 1 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAGA............................................................ 25 1 1 70.00 70 70 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATTA.............................................................. 23 1 3 70.00 210 208 2 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAAA............................................................. 24 1 3 67.00 201 200 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGTAA............................................................ 25 1 1 61.00 61 61 0 0
..........................................................................................................CATTGTACAGGGCTATGA.............................................................. 18 0 2 56.00 112 98 13 1
................................................................AGCTTCTTTACAGTGCTGCCTTGT.................................................................................................. 24 0 1 44.00 44 44 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATT............................................................... 22 1 3 44.00 132 128 0 4
.....................................................................................................AGCAGCATTGTACAGGGCTATGTAT............................................................ 25 2 2 42.00 84 84 0 0
.....................................................................................................CGCCGCATTGTACAGGGCTATGA.............................................................. 23 2 2 41.00 82 82 0 0
.....................................................................................................AGCAGCATTGAACAGGGCTATGA.............................................................. 23 1 2 40.00 80 79 1 0
.....................................................................................................AGCAGCATTGTACGGGGCTATGA.............................................................. 23 1 2 36.00 72 70 1 1
.....................................................................................................AGCCGCATTGTACCGGGCTATGA.............................................................. 23 2 2 35.00 70 70 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGT.............................................................. 22 1 2 34.00 68 67 0 1
......................................................................................................GCAGCATTGTACAGGGCTATGAT............................................................. 23 1 2 32.00 64 64 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGAA............................................................. 23 0 2 31.50 63 63 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTATGAT............................................................. 24 2 2 31.00 62 62 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGATA............................................................ 25 1 1 29.00 29 29 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATTT.............................................................. 23 2 3 28.00 84 83 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGTTT............................................................ 25 3 2 27.00 54 50 3 1
.....................................................................................................AGCAGCATTGTACCGGGCTATGT.............................................................. 23 2 2 26.50 53 53 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAAT............................................................. 24 2 3 25.67 77 77 0 0
.....................................................................................................AGCAGCATTGGACAGGGCTATGA.............................................................. 23 1 2 24.50 49 46 1 2
.....................................................................................................AGCAGCCTTGTACAGGGCTATGA.............................................................. 23 1 2 24.50 49 48 1 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAT........................................................... 26 1 1 24.00 24 24 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAC............................................................. 24 1 2 23.50 47 47 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAG.............................................................. 23 2 3 22.67 68 67 0 1
.....................................................................................................AGCAGCATTGTACAGGGCAATGA.............................................................. 23 1 2 22.50 45 43 2 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGC.............................................................. 23 1 2 22.00 44 43 1 0
.........................................................................................................GCATTGTACAGGGCTATGAT............................................................. 20 1 2 22.00 44 31 13 0
........................................................................................................AGCATTGTACAGGGCTATGA.............................................................. 20 0 2 22.00 44 43 0 1
.....................................................................................................AGCAGCATTGTACAAGGCTATGA.............................................................. 23 1 2 22.00 44 43 1 0
.....................................................................................................AGCAGCATTGTACAGGGCTA................................................................. 20 0 3 21.67 65 56 0 9
.....................................................................................................AGCAGCATTGTACAGGGCTATGAGT............................................................ 25 2 2 21.50 43 43 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATGT.............................................................. 23 2 2 21.50 43 42 1 0
.................................................................GCTTCTTTACAGTGCTGCCTTGA.................................................................................................. 23 1 2 21.00 42 42 0 0
.....................................................................................................AGCAGCATTGTTCAGGGCTATGA.............................................................. 23 1 2 21.00 42 42 0 0
.........................................................................................................GCATTGTACAGGGCTATGAA............................................................. 20 0 2 20.50 41 41 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGG.............................................................. 23 1 2 20.50 41 38 2 1
.....................................................................................................AGCAGCATTGTACAGGGCTATTAA............................................................. 24 1 3 19.67 59 59 0 0
.....................................................................................................AGGCGCATTGTACCGGGCTATGA.............................................................. 23 3 2 18.50 37 37 0 0
.....................................................................................................AGCAGCATTGTGCAGGGCTATGA.............................................................. 23 1 2 18.50 37 37 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTAAA............................................................... 22 2 3 18.33 55 52 0 3
.......................................................................................................CAGCATTGTACAGGGCTATGAAA............................................................ 23 0 1 18.00 18 18 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTATGAA............................................................. 24 1 2 18.00 36 36 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGAT............................................................. 25 1 2 17.50 35 35 0 0
.....................................................................................................AGCAGCATTGTACAGGCCTATGA.............................................................. 23 1 2 17.50 35 34 1 0
.....................................................................................................AGAAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 17.50 35 35 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGAA............................................................. 22 0 2 16.00 32 31 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGATAT........................................................... 26 2 1 15.00 15 15 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGATTT........................................................... 26 3 2 15.00 30 30 0 0
...........................................................................................................ATTGTACAGGGCTATGA.............................................................. 17 0 2 15.00 30 19 0 11
.....................................................................................................AGCGGCATTGTACAGGGCTATGA.............................................................. 23 1 2 15.00 30 30 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAC............................................................ 25 1 2 15.00 30 30 0 0
.....................................................................................................AGCAGCATTGTACAGGGCCATGA.............................................................. 23 1 2 15.00 30 30 0 0
.....................................................................................................AGCTGCATTGTACAGGGCTATGA.............................................................. 23 1 2 14.50 29 28 1 0
.....................................................................................................AGCAGCATTGTACAGGTCTATGA.............................................................. 23 1 2 14.50 29 14 15 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGATCG........................................................... 26 2 2 14.00 28 0 28 0
................................................................AGCTTCTTTACAGTGCTGCCTTGTA................................................................................................. 25 0 1 14.00 14 14 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAA........................................................... 26 1 1 14.00 14 14 0 0
.........................................................................................................GCATTGTACAGGGCTATGT.............................................................. 19 1 4 13.75 55 55 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGT.............................................................. 24 1 2 13.50 27 26 0 1
.....................................................................................................AGCCGCATTGTACAGGGCTATGAA............................................................. 24 1 2 13.50 27 27 0 0
...................................................................................................AAAGCAGCATTGTACAGGGCTATGA.............................................................. 25 1 2 13.50 27 27 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAGA............................................................. 24 2 3 13.00 39 39 0 0
.....................................................................................................AGCAGCATTGTCCACGGCTATGA.............................................................. 23 2 2 13.00 26 26 0 0
.....................................................................................................AGCAGCATTGTACACGGCTATGA.............................................................. 23 1 2 12.50 25 25 0 0
.....................................................................................................AGCAGCAATGTACAGGGCTATGA.............................................................. 23 1 2 12.50 25 25 0 0
.....................................................................................................AGACGCATTGTACCGGGCTATGA.............................................................. 23 3 3 12.00 36 35 1 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATGAT............................................................. 24 2 2 12.00 24 24 0 0
.....................................................................................................AGACGCATTGTACAGGGCTATGA.............................................................. 23 2 2 12.00 24 24 0 0
.....................................................................................................TGCCGCATTGTACAGGGCTATGA.............................................................. 23 2 2 11.50 23 23 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATGG.............................................................. 23 2 2 11.50 23 23 0 0
.....................................................................................................AGCAGCATTGTACAGGACTATGA.............................................................. 23 1 2 11.50 23 22 1 0
.....................................................................................................AGCAGCATCGTACAGGGCTATGA.............................................................. 23 1 2 11.50 23 23 0 0
.....................................................................................................AGTAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 11.50 23 21 0 2
.....................................................................................................CGCAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 11.00 22 22 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGAT............................................................. 22 1 2 11.00 22 21 0 1
......................................................................................................GCAGCATTGTACAGGGCTATG............................................................... 21 0 2 11.00 22 22 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATTAT............................................................. 24 2 3 10.67 32 32 0 0
.....................................................................................................AGCAGCATAGTACAGGGCTATGA.............................................................. 23 1 2 10.00 20 20 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTG................................................................................................... 23 0 1 10.00 10 10 0 0
.....................................................................................................AGCAGCATGGTACAGGGCTATGA.............................................................. 23 1 2 10.00 20 20 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTAA................................................................ 21 1 3 10.00 30 27 1 2
.....................................................................................................AGCCGCATTGTCCAGGGCTATGA.............................................................. 23 2 2 9.50 19 18 1 0
.....................................................................................................AGCAGCGTTGTACAGGGCTATGA.............................................................. 23 1 2 9.50 19 19 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGAA............................................................. 25 0 2 9.50 19 18 0 1
.....................................................................................................AGCAGCATTGTCCAGGGCTATGAA............................................................. 24 1 2 9.50 19 19 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTAAGA.............................................................. 23 1 2 9.00 18 16 1 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGTTA............................................................ 25 2 1 9.00 9 9 0 0
.....................................................................................................AGCCGCATTGTACAGGGCTATGT.............................................................. 23 2 2 9.00 18 18 0 0
.....................................................................................................AGCCGCATTGTACAGGACTATGA.............................................................. 23 2 2 9.00 18 17 1 0
.....................................................................................................ACCAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 9.00 18 17 0 1
......................................................................................................GCAGCATTGTACAGGGCTATGAAA............................................................ 24 0 1 9.00 9 9 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTAT................................................................ 21 1 3 9.00 27 27 0 0
.....................................................................................................AGCAGCATTATACAGGGCTATGA.............................................................. 23 1 2 9.00 18 18 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTAGGA.............................................................. 23 1 2 9.00 18 17 1 0
.....................................................................................................AGCAGCATTGTACAGGGCTAAAA.............................................................. 23 2 3 8.67 26 26 0 0
.....................................................................................................AGCAGCATTGTCCAAGGCTATGA.............................................................. 23 2 2 8.50 17 17 0 0
.....................................................................................................AGCAGCATTGTACAGGGATATGA.............................................................. 23 1 2 8.50 17 17 0 0
.....................................................................................................AGCCGCATTGTACAGGGCTATGAT............................................................. 24 2 2 8.50 17 17 0 0
.....................................................................................................ATCAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 8.50 17 15 0 2
.....................................................................................................AGCATCATTGTACAGGGCTATGA.............................................................. 23 1 2 8.00 16 15 0 1
................................................................AGCTTCTTTACAGTGCTGCCTTTAA................................................................................................. 25 2 1 8.00 8 8 0 0
.....................................................................................................AGCAGCATTGTACATGGCTATGA.............................................................. 23 1 2 8.00 16 15 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTACGA.............................................................. 23 1 2 8.00 16 16 0 0
....................................................................................................TAGCAGCATTGTACAGGGCTATGA.............................................................. 24 1 2 8.00 16 16 0 0
......................................................................................................GCAGCATTGTACAGGGCTAT................................................................ 20 0 3 7.67 23 19 0 4
.....................................................................................................AGCAGCATTCTACAGGGCTATGA.............................................................. 23 1 2 7.50 15 14 1 0
....................................................................................................AAGCAGCATTGTACAGGGCTATG............................................................... 23 0 2 7.50 15 14 0 1
.....................................................................................................AGCAGCATTGTACCGGGCTATG............................................................... 22 1 2 7.50 15 15 0 0
.........................................................................................................GCATTGTACAGGGCTATGAAT............................................................ 21 1 2 7.00 14 14 0 0
.....................................................................................................AGCAGCATTGTAAAGGGCTATGA.............................................................. 23 1 2 7.00 14 14 0 0
..................................................................................................AAAAGCAGCATTGTACAGGGCTATGA.............................................................. 26 2 2 7.00 14 14 0 0
.....................................................................................................AGCAGCATTGTATAGGGCTATGA.............................................................. 23 1 2 7.00 14 13 0 1
................................................................AGCTTCTTTACAGTGCTGCCTTGG.................................................................................................. 24 1 1 7.00 7 7 0 0
.....................................................................................................AGCAGCACTGTACAGGGCTATGA.............................................................. 23 1 2 6.50 13 13 0 0
.....................................................................................................AGCAGCATTGTACAGCGCTATGA.............................................................. 23 1 2 6.50 13 12 0 1
.....................................................................................................AGTCGCATTGTACCGGGCTATGA.............................................................. 23 3 2 6.50 13 12 1 0
.....................................................................................................AGCAGCATTGTACAGGGTTATGA.............................................................. 23 1 2 6.50 13 13 0 0
.....................................................................................................AGCAACATTGTACAGGGCTATGA.............................................................. 23 1 2 6.50 13 13 0 0
.....................................................................................................AGCCGCATAGTACAGGGCTATGA.............................................................. 23 2 2 6.50 13 13 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGAAT............................................................ 24 1 2 6.50 13 12 0 1
.....................................................................................................AGCCGCATTGTACAGGGCTATG............................................................... 22 1 2 6.50 13 13 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAAG............................................................. 24 2 3 6.33 19 19 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGT.............................................................. 21 1 2 6.00 12 11 0 1
................................................................AGCTTCTTTACAGTGCTGCCTTAT.................................................................................................. 24 1 1 6.00 6 6 0 0
................................................................AGCTTCTTTACAGAGCTGCCTTGA.................................................................................................. 24 2 1 6.00 6 6 0 0
.....................................................................................................AGCAGCATTGTACTGGGCTATGAT............................................................. 24 2 2 6.00 12 12 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAAAA............................................................ 25 1 2 6.00 12 12 0 0
.....................................................................................................AGGCGCATTGTCCAGGGCTATGA.............................................................. 23 3 2 6.00 12 12 0 0
......................................................................................................GCAGCATTGTACAGGGCTATAA.............................................................. 22 1 3 6.00 18 18 0 0
.....................................................................................................AGCAGCATTGCACAGGGCTATGT.............................................................. 23 2 2 6.00 12 11 0 1
.....................................................................................................GGCCGCATTGTACAGGGCTATGA.............................................................. 23 2 2 5.50 11 11 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATG............................................................... 22 1 2 5.50 11 11 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGTGT............................................................ 25 3 2 5.50 11 11 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGAG............................................................. 23 1 2 5.50 11 11 0 0
.....................................................................................................AGCAGAATTGTACAGGGCTATGA.............................................................. 23 1 2 5.50 11 11 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGGA............................................................. 24 1 2 5.50 11 11 0 0
.....................................................................................................GGCAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 5.50 11 11 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTATAA.............................................................. 23 2 3 5.33 16 16 0 0
.........................................................................................................GCATTGTACAGGGCTATGAAA............................................................ 21 0 1 5.00 5 5 0 0
..........................................................................................................CATTGTACAGGGCTATGAA............................................................. 19 0 2 5.00 10 10 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTAA.................................................................................................. 24 2 1 5.00 5 5 0 0
.......................................................................................................CAGCATTGTACAGGGCTATG............................................................... 20 0 2 5.00 10 9 0 1
.....................................................................................................AGCAGCATTGTACAGTGCTATGA.............................................................. 23 1 2 5.00 10 9 0 1
.....................................................................................................AGCAGCATTGTACAGGGCTATGATAA........................................................... 26 2 1 5.00 5 5 0 0
.........................................................................................................GCATTGTACAGGGCTATG............................................................... 18 0 2 5.00 10 10 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTTT.................................................................................................. 24 1 1 5.00 5 5 0 0
..........................................................................................................CATTGTACAGGGCTATG............................................................... 17 0 2 5.00 10 2 8 0
.......................................................................................................CAGCATTGTACAGGGCTATGATT............................................................ 23 2 2 5.00 10 10 0 0
.....................................................................................................AGCAGTATTGTACAGGGCTATGA.............................................................. 23 1 2 5.00 10 9 1 0
.....................................................................................................AGCCGCATTGTACAAGGCTATGA.............................................................. 23 2 2 5.00 10 10 0 0
.....................................................................................................AGCAGCATTTTACAGGGCTATGA.............................................................. 23 1 2 5.00 10 10 0 0
.....................................................................................................AGCAGCATTGTACAGAGCTATGA.............................................................. 23 1 2 4.50 9 9 0 0
.....................................................................................................AGCAGCCTTGTACAGGGCTATGAA............................................................. 24 1 2 4.50 9 9 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTCTGA.............................................................. 23 1 2 4.50 9 9 0 0
.....................................................................................................AGACGCATTGTCCAGGGCTATGA.............................................................. 23 3 4 4.50 18 18 0 0
........................................................................................................AGCATTGTACAGGGCTATGAT............................................................. 21 1 2 4.50 9 9 0 0
.....................................................................................................AGGCGCATTGTACAGGGCTATGA.............................................................. 23 2 2 4.50 9 9 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGATT............................................................ 24 2 2 4.50 9 9 0 0
.....................................................................................................AGCAGCATTGTACGGGGCTATGAT............................................................. 24 2 2 4.50 9 9 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAG........................................................... 26 0 1 4.00 4 4 0 0
................................................................AGCTTCTTTACAGTGCTGCCTAGA.................................................................................................. 24 2 1 4.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGTAAA........................................................... 26 2 1 4.00 4 4 0 0
.....................................................................................................AGCACCATTGTACAGGGCTATGA.............................................................. 23 1 2 4.00 8 8 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGTGA............................................................ 25 2 1 4.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCT.................................................................. 19 0 3 4.00 12 5 0 7
.....................................................................................................CGCCGCATTGTACAGGGCTATGAA............................................................. 24 2 2 4.00 8 8 0 0
.....................................................................................................AGCAGCTTTGTACAGGGCTATGA.............................................................. 23 1 2 4.00 8 8 0 0
.....................................................................................................AGCAGCATTGTACTGGGCTATGAA............................................................. 24 1 2 4.00 8 8 0 0
.....................................................................................................TGCAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 4.00 8 8 0 0
.....................................................................................................AGAAGCATTGTACCGGGCTATGA.............................................................. 23 2 2 4.00 8 8 0 0
.....................................................................................................AGCCGCATTGTACAGGGCTAT................................................................ 21 1 3 4.00 12 11 0 1
................................................................AGCTTCTTTACAGTGCTGCCTTGTAA................................................................................................ 26 1 1 4.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTATGAAA............................................................ 25 1 1 4.00 4 4 0 0
..........................................................................................................CATTGTACAGGGCTATGAT............................................................. 19 1 2 4.00 8 8 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAGT............................................................. 24 3 3 3.67 11 11 0 0
.....................................................................................................AGCCGCATTGTACCGGGCTATGT.............................................................. 23 3 2 3.50 7 7 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGTT............................................................. 23 2 2 3.50 7 7 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGGT............................................................. 24 2 2 3.50 7 7 0 0
.....................................................................................................AGCAGCATTGTGCAGGGCTATGT.............................................................. 23 2 2 3.50 7 7 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTGTGA.............................................................. 23 1 2 3.50 7 7 0 0
.....................................................................................................AGCCGCATTGTACCGGGCTATGAT............................................................. 24 3 2 3.50 7 7 0 0
..................................................................CTTCTTTACAGTGCTGCCTTGA.................................................................................................. 22 1 2 3.50 7 7 0 0
.....................................................................................................AGCAGCATTGTACCGGGCTATGTA............................................................. 24 2 2 3.50 7 7 0 0
.....................................................................................................AGCCGCATTGTACAGGCCTATGA.............................................................. 23 2 2 3.50 7 7 0 0
.....................................................................................................CGCCGCATTGTACAGGGCTATGAT............................................................. 24 3 2 3.50 7 7 0 0
.........................................................................................................GCATTGTACAGGGCTAT................................................................ 17 0 6 3.17 19 18 0 1
.....................................................................................................AGCAGCATTGTACAAGGCTATGAT............................................................. 24 2 2 3.00 6 6 0 0
.....................................................................................................AGTCGCATTGTACAGGGCTATGA.............................................................. 23 2 2 3.00 6 6 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTGAT................................................................................................. 25 2 2 3.00 6 5 0 1
......................................................................................................GCAGCATTGGACAGGGCTATGA.............................................................. 22 1 2 3.00 6 6 0 0
................................................................AGCTTCTTTACAGTGCTGCCTAAA.................................................................................................. 24 3 1 3.00 3 3 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATGC.............................................................. 23 2 4 3.00 12 12 0 0
................................................................AGCTTCTTTACAGCGCTGCCTTGA.................................................................................................. 24 2 1 3.00 3 3 0 0
.....................................................................................................AGCAGCATTGCACAGGGCTATGAT............................................................. 24 2 2 3.00 6 6 0 0
....................................................................................................AAGCAGCATTGTACCGGGCTATGA.............................................................. 24 1 2 3.00 6 6 0 0
.........................................................................................................GCATTGTACAGGGCTATGC.............................................................. 19 1 2 3.00 6 5 1 0
.....................................................................................................AGCAGCATTGAACAGGGCTATGAA............................................................. 24 1 2 3.00 6 6 0 0
........................................................................................................AGCATTGTACAGGGCTATGAAA............................................................ 22 0 1 3.00 3 3 0 0
.........................................................................................................GCATTGTACAGGGCTATGTAA............................................................ 21 1 1 3.00 3 3 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGAAAG........................................................... 24 0 1 3.00 3 3 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTT................................................................................................... 23 1 1 3.00 3 3 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGC.............................................................. 22 1 2 3.00 6 6 0 0
.....................................................................................................AGCAGCATTGTACTGGGCTATGT.............................................................. 23 2 2 3.00 6 6 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAC........................................................... 26 1 1 3.00 3 3 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTGAA................................................................................................. 25 1 1 3.00 3 3 0 0
............................................................................................................TTGTACAGGGCTATGA.............................................................. 16 0 14 2.86 40 37 0 3
......................................................................................................GCAGCATTGTACAGGGCTATA............................................................... 21 1 3 2.67 8 8 0 0
.......................................................................................................CAGCATTGTACAGGGCTAT................................................................ 19 0 3 2.67 8 8 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTAT................................................................ 22 0 3 2.67 8 7 0 1
.....................................................................................................AGCAGCATTGTACTGGGCTATAA.............................................................. 23 2 3 2.67 8 8 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATTTA............................................................. 24 2 3 2.67 8 8 0 0
.....................................................................................................AGCAGCATTGTACAGGCCTATAA.............................................................. 23 2 3 2.67 8 8 0 0
.....................................................................................................AGCAGCATTGTACAGGCCTATGT.............................................................. 23 2 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTACGGGGCTATGAA............................................................. 24 1 2 2.50 5 5 0 0
....................................................................................................AAGCAGCATTGTAAAGGGCTATGA.............................................................. 24 1 2 2.50 5 5 0 0
.....................................................................................................ACCAGCATTGTACAGGGCTATGAT............................................................. 24 2 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTATGAAT............................................................ 25 2 2 2.50 5 5 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGAAT............................................................ 26 1 2 2.50 5 5 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGAAT............................................................ 23 1 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATTAAA............................................................ 25 1 2 2.50 5 5 0 0
......................................................................................................ACAGCATTGTACAGGGCTATGA.............................................................. 22 1 2 2.50 5 5 0 0
.....................................................................................................TGCAGCATTGTACAGGGCTATGC.............................................................. 23 2 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTACAGGGCGATGA.............................................................. 23 1 2 2.50 5 5 0 0
.....................................................................................................AGCAGGATTGTACAGGGCTATGA.............................................................. 23 1 2 2.50 5 5 0 0
.....................................................................................................AGGAGCATTGTACCGGGCTATGA.............................................................. 23 2 2 2.50 5 5 0 0
.....................................................................................................CGCCGCATAGTACAGGGCTATGA.............................................................. 23 3 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGCT............................................................. 24 2 2 2.50 5 5 0 0
.....................................................................................................AGCAGCCTTGTACAGGGCTATGAT............................................................. 24 2 2 2.50 5 5 0 0
......................................................................................................GCAGCATTGTACAGGGCTCTGA.............................................................. 22 1 2 2.50 5 4 1 0
.....................................................................................................AGGAGCATTGTACAGGGCTATGA.............................................................. 23 1 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGATC............................................................ 25 2 2 2.50 5 5 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATGATT............................................................ 26 2 2 2.50 5 5 0 0
.....................................................................................................AGCAGCATTGTCCAGGGCTAT................................................................ 21 1 5 2.40 12 12 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATATT............................................................. 24 3 5 2.40 12 12 0 0
.....................................................................................................AGCCGCATTGTACAGGGCTATTA.............................................................. 23 2 3 2.33 7 7 0 0
..........................................................................................................CATTGTACAGGGCTATGT.............................................................. 18 1 5 2.20 11 11 0 0
.....................................................................................................AGCAGCATTGTACAAGGCTATGT.............................................................. 23 2 2 2.00 4 4 0 0
.........................................................................................................GCATTGTACAGGGCTATGATA............................................................ 21 1 1 2.00 2 2 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGTAA............................................................ 24 1 1 2.00 2 2 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGTTT............................................................ 24 3 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGGACAGGGCTATGAT............................................................. 24 2 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCAATGT.............................................................. 23 2 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTAAG............................................................... 22 1 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCAATGAG............................................................. 24 2 2 2.00 4 4 0 0
.....................................................................................................AGCCGCATTGTTCAGGGCTATGA.............................................................. 23 2 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGTG............................................................. 24 2 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATAAAT............................................................ 25 2 3 2.00 6 6 0 0
.....................................................................................................AGCAGCATAGTACAGGGCTATTA.............................................................. 23 2 3 2.00 6 6 0 0
.................................................................GCTTCTTTACAGTGCTGCCTTGT.................................................................................................. 23 0 2 2.00 4 4 0 0
.....................................................................................................AGCCGCATTGTACCGGGCTATGAC............................................................. 24 3 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATAGTACAGGGCTATGT.............................................................. 23 2 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGCACCGGGCTATGA.............................................................. 23 2 2 2.00 4 3 0 1
.................................................................................................CAAAAGCAGCATTGTACAGGGCTATGA.............................................................. 27 3 2 2.00 4 4 0 0
.......................................................................................................CAGCATTGTACAGGGCTATGATA............................................................ 23 1 1 2.00 2 2 0 0
.....................................................................................................AGCAGCAGTGTACAGGGCTATGA.............................................................. 23 1 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACACGGCTATGAT............................................................. 24 2 2 2.00 4 4 0 0
................................................................AGCTTCTTTACAGTGCTGCCTTGTAT................................................................................................ 26 1 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGAACAGGGCTATGAAA............................................................ 25 1 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGTACAGAGCTATGAT............................................................. 24 2 2 2.00 4 4 0 0
...............................................................CAGCTTCTTTACAGTGCTGCCTTGA.................................................................................................. 25 1 1 2.00 2 2 0 0
................................................................................................GGCCCAGCAGCATTGTACAGGGCTATGA.............................................................. 28 2 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAAT.......................................................... 27 2 1 2.00 2 2 0 0
........................................................................................................AGCATTGTACAGGGCTATGT.............................................................. 20 1 3 2.00 6 6 0 0
....................................................................................................AAGCAGCATTGTACAGGGCTATAA.............................................................. 24 1 3 2.00 6 6 0 0
.....................................................................................................AGCAGCATTGCACAGGGCTATGAAA............................................................ 25 1 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGCACAGGGCTATGAA............................................................. 24 1 2 2.00 4 4 0 0
...........................................................................................................ATTGTACAGGGCTATGAAA............................................................ 19 0 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGTACAGGGCTATGAAAGA.......................................................... 27 0 1 2.00 2 2 0 0
.....................................................................................................AGCAGCATTGTACAGGGGTATGA.............................................................. 23 1 2 2.00 4 4 0 0
.....................................................................................................AGCAGCATTGTACAGGCCTATGAA............................................................. 24 1 2 2.00 4 4 0 0
...............................................................AAGCTTCTTTACAGTGCTGCCTTGA.................................................................................................. 25 2 2 2.00 4 3 0 1
.....................................................................................................AGCAGCATTGAACAGGGCTATGAT............................................................. 24 2 2 2.00 4 4 0 0
.....................................................................................................AGCCGCATTGTGCAGGGCTATGA.............................................................. 23 2 2 2.00 4 4 0 0
......................................................................................................GCAGCATTGTACAGGGCTATGAAAA........................................................... 25 1 1 2.00 2 2 0 0

Anti-sense strand reads

CTCGCCAGTCTCCTTCCGGGTGGAACCAAGAAGAGGTGGAGTCGTCTCGACAGAAGCACGAAAGTCGAAGAAATGTCACGACGGAACATCGTAAGTCCAGTTCGTCGTAACATGTCCCGATACTTTCTTGGTTCTTACCCGACGGGAATTCCTTTCTCCTAGATCCTAGGTCAACCACGTCGAAAT
***********************************************..((((.((.(((((((((.((.(((((((((((((((.......))))....))))))))))).)))))..)))))).)).))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:44 PM