ID:

rno-mir-1

 Coordinate:

chr18:2054933-2055019 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.7 -43.4 -43.3

Sense Strand Reads

ACAAATGGAGGATGGGCTGCTTCATGTTTCCACAACAATCGGCACAATAGTGCCTACTCAGAGCACATACTTCTTTATGTACCCATATGAACATAGAATGCTATGGAATGTAAAGAAGTGTGTATTTTGGGTAGGTAATGTCCGCCAAGAAGAAGCTAAGCAGAAGATAAAGGAAACCCTTTCCAGG
***********************************.....(((...(((.(((((((((((((.((((((((((((((((..(((((..............))))).)))))))))))))))).))))))))))))).)))..)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
.......................................................................................................TGGAATGTAAAGAAGTGTGTAT.............................................................. 22 0 1 13.00 13 13
.......................................................................................................TGGAATGTAAAGAAGTGTGTATAT............................................................ 24 1 1 1.00 1 1
.......................................................................................................TGGAATGTAAAGAAGTGTGTATTT............................................................ 24 0 1 1.00 1 1
.......................................................................................................TGGAATGTAAAGAAGTCTGTAT.............................................................. 22 1 2 1.00 2 2
.......................................................................................................TGGAATGTAAAGAAGTGTGTAA.............................................................. 22 1 1 1.00 1 1
.......................................................................................................TGGCATGTAAAGACGTGTGTAT.............................................................. 22 2 2 0.50 1 1
.......................................................................................................TGGCATGTAAAGAAGTCTGTAT.............................................................. 22 2 2 0.50 1 1

Anti-sense strand reads

TGTTTACCTCCTACCCGACGAAGTACAAAGGTGTTGTTAGCCGTGTTATCACGGATGAGTCTCGTGTATGAAGAAATACATGGGTATACTTGTATCTTACGATACCTTACATTTCTTCACACATAAAACCCATCCATTACAGGCGGTTCTTCTTCGATTCGTCTTCTATTTCCTTTGGGAAAGGTCC
***********************************.....(((...(((.(((((((((((((.((((((((((((((((..(((((..............))))).)))))))))))))))).))))))))))))).)))..)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:38 PM