ID:

rno-let-7f-1

 Coordinate:

chr17:16418221-16418309 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.4 -48.3
mature
  1. chr17:16418228-16418249 +
  2. chrX:21583279-21583300 +
star

Sense Strand Reads

ACCTTTCTTGAAAGAGACTGATGTTTATTCCAGAAGAAAAAAATTGCTCTATCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTAGACTTGCTGCATTGTTTTATCTAGAGGATATTATAAACTTAGGTG
******************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))...***************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.........................................................TGAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 0 2 9254.00 18508 17973 464 71
.........................................................TGAGGTAGTAGATTGTATAGTTA............................................................................................................. 23 1 2 2146.00 4292 4277 10 5
.........................................................TGAGGTAGTAGATTGTATAGT............................................................................................................... 21 0 2 1221.00 2442 2223 209 10
.........................................................TGAGGTAGTAGATTGTATAG................................................................................................................ 20 0 2 636.00 1272 1142 123 7
..........................................................GAGGTAGTAGATTGTATAGTT.............................................................................................................. 21 0 2 317.50 635 618 17 0
.........................................................TGAGGTAGTAGATTGTATAGTTG............................................................................................................. 23 0 1 170.00 170 170 0 0
.........................................................TGAGGTAGTAGATTGTAT.................................................................................................................. 18 0 2 148.50 297 243 54 0
.........................................................TGAGGTAGTAGATTGTATAGTTAA............................................................................................................ 24 2 3 96.67 290 289 0 1
.........................................................TGAGGTAGTAGGTTGTATAGTTG............................................................................................................. 23 1 4 95.75 383 365 0 18
..........................................................GAGGTAGTAGATTGTATAGTTA............................................................................................................. 22 1 2 62.50 125 124 1 0
.........................................................TGAGGTAGTAGATTGTATAGTTAT............................................................................................................ 24 1 2 57.00 114 114 0 0
.........................................................TGAGGTAGTAGATTGTATAGTA.............................................................................................................. 22 1 2 56.50 113 107 1 5
.........................................................TGAGGTAGTAGATTGTATCGTT.............................................................................................................. 22 1 2 55.50 111 111 0 0
.........................................................TGAGGTAGTAGATTGTATA................................................................................................................. 19 0 2 51.00 102 92 10 0
.........................................................TGAGGTAGTAGATTGTATAGTAA............................................................................................................. 23 2 2 45.00 90 89 0 1
.........................................................TGAGGTAGTAGATTGTCTAGTT.............................................................................................................. 22 1 2 40.50 81 81 0 0
..........................................................GAGGTAGTAGATTGTATAGT............................................................................................................... 20 0 2 39.00 78 69 9 0
.........................................................TGAGGTAGTAGATTGTATAGTTGT............................................................................................................ 24 0 1 30.00 30 29 1 0
.........................................................TGAGGTAGTAGCTTGTATAGTT.............................................................................................................. 22 1 4 29.50 118 112 2 4
.........................................................TGAGGGAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 29.50 59 59 0 0
..........................................................GAGGTAGTAGATTGTATAG................................................................................................................ 19 0 2 27.00 54 50 4 0
.........................................................TGAGGTAGTAGATTGTATAGTC.............................................................................................................. 22 1 2 24.00 48 48 0 0
.........................................................TGAGGTAGTAGATCGTATAGTT.............................................................................................................. 22 1 2 23.00 46 46 0 0
.......................................................AATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 24 1 2 22.50 45 42 3 0
.........................................................TGAGGTAGTAGATAGTATAGTT.............................................................................................................. 22 1 2 19.50 39 39 0 0
.........................................................TGAGGTAGTAGGTTGTATAGTTGT............................................................................................................ 24 1 2 19.50 39 38 1 0
.........................................................TGAGGTAGTAGATTGTATGGTT.............................................................................................................. 22 1 4 17.25 69 64 0 5
........................................................TTGAGGTAGTAGATTGTATAGT............................................................................................................... 22 1 2 17.00 34 34 0 0
.........................................................TGAGGTAGTAGATTGTATAA................................................................................................................ 20 1 2 15.00 30 23 7 0
.........................................................TGAGGTAGTAGATTGTATAGA............................................................................................................... 21 1 2 14.50 29 25 4 0
.........................................................TGAGGTAGTAGATTGTATCGTTA............................................................................................................. 23 2 2 14.50 29 29 0 0
.........................................................TGAGGTAGTAGATTGTCTAGTTA............................................................................................................. 23 2 2 14.00 28 28 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTGA............................................................................................................ 24 1 1 14.00 14 14 0 0
.........................................................TGGGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 13.50 27 26 1 0
.........................................................TGAGGTAGGAGATTGTATAGTT.............................................................................................................. 22 1 3 13.00 39 37 0 2
.........................................................TGAGGCAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 13.00 26 25 0 1
.........................................................TGAGGTAGTAGATTGTATAGTTGTGG.......................................................................................................... 26 0 1 13.00 13 13 0 0
.........................................................TGCGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 12.50 25 25 0 0
.........................................................TGAGGTAGAAGATTGTATAGTT.............................................................................................................. 22 1 2 12.50 25 24 0 1
.........................................................TGAGGTAGCAGATTGTATAGTT.............................................................................................................. 22 1 2 12.00 24 23 1 0
.........................................................TGAGGTAGTAGTTTGTACAGTTGT............................................................................................................ 24 2 2 12.00 24 24 0 0
.........................................................TGAGGTAGTAGATTGTACAGTT.............................................................................................................. 22 1 3 12.00 36 35 1 0
.........................................................TGAGGTAGTAGATTGTATCGT............................................................................................................... 21 1 2 11.00 22 21 0 1
.........................................................TGAGGAAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 11.00 22 18 2 2
.........................................................TGAGGTAGTAGATTGCATAGTT.............................................................................................................. 22 1 2 10.00 20 19 1 0
..........................................................GAGGTAGTAGATTGTATAGTTG............................................................................................................. 22 0 1 9.00 9 9 0 0
.......................................................ACTGAGGTAGTAGATTGTATAGTT.............................................................................................................. 24 1 1 9.00 9 0 0 9
.........................................................TGAGGTAGTAGATTATATAGTT.............................................................................................................. 22 1 2 8.50 17 15 2 0
.........................................................TGAGGTAGTAGATTGTATAGTTAG............................................................................................................ 24 2 2 8.50 17 17 0 0
..................................................ATCAAAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 29 3 1 8.00 8 8 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTC............................................................................................................. 23 1 2 7.50 15 14 1 0
.........................................................TGAGGTAGTAGTTTGTATAGTT.............................................................................................................. 22 1 5 7.40 37 36 1 0
.........................................................TGAGGTAGTAGATTGTATGGTTA............................................................................................................. 23 2 4 7.25 29 26 0 3
...................................................TCAAAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 28 3 1 7.00 7 7 0 0
.........................................................TGTGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 7.00 14 11 3 0
.................................................................................................................CTATACAATCTATTGCCTTCCT...................................................... 22 1 1 7.00 7 7 0 0
.........................................................TGAGGTAGTAGATTGTATAGTG.............................................................................................................. 22 1 2 7.00 14 14 0 0
.....................................................AAAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 26 3 3 7.00 21 21 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTGTGGG......................................................................................................... 27 0 1 7.00 7 7 0 0
.........................................................TGCGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 6.50 13 13 0 0
.........................................................TGAGGTAGTAGATTGTATCG................................................................................................................ 20 1 2 6.50 13 13 0 0
.........................................................TGAGGTAGTAGATTGTTTAGTT.............................................................................................................. 22 1 2 6.50 13 13 0 0
.........................................................TGAGGTAGTAGATTGTGTAGTT.............................................................................................................. 22 1 2 6.50 13 13 0 0
.........................................................TGAGGTAGTAGATTGTATAGTCA............................................................................................................. 23 2 2 6.50 13 12 0 1
.........................................................TGAGTTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 6.50 13 6 0 7
.........................................................TGAGGTAGTAAATTGTATAGTT.............................................................................................................. 22 1 2 6.00 12 11 1 0
.........................................................CGAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 6.00 12 9 1 2
.........................................................TGAAGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 6.00 12 12 0 0
.........................................................TGAGGTAGTACATTGTATAGTT.............................................................................................................. 22 1 2 6.00 12 11 0 1
...................................................TCAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 28 2 1 6.00 6 6 0 0
.........................................................TGAGGTAGTAGATTGTCTAGT............................................................................................................... 21 1 2 6.00 12 11 0 1
.........................................................AGAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 5.50 11 11 0 0
..........................................................GAGGTAGTAGATTGTATAGTTAT............................................................................................................ 23 1 2 5.50 11 11 0 0
.........................................................TGAGGTAGTAGATTGTATATTT.............................................................................................................. 22 1 2 5.00 10 10 0 0
.........................................................TGAGGTAGTAGATTGTA................................................................................................................... 17 0 2 5.00 10 7 3 0
.................................................................................................................CTATACAATCTATTGCCTTCCTAA.................................................... 24 3 1 5.00 5 5 0 0
.........................................................TGAGGTAGTAGATAGTATAGT............................................................................................................... 21 1 2 5.00 10 10 0 0
.........................................................TGAGGTAGTAGATTCTATAGTT.............................................................................................................. 22 1 2 5.00 10 9 1 0
.........................................................TGGGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 5.00 10 9 1 0
.........................................................TGAGGTAGTAGATTGTATAGTTGTG........................................................................................................... 25 0 1 5.00 5 5 0 0
.........................................................TGAGGTAGTAGATCGTATAGTTA............................................................................................................. 23 2 2 5.00 10 10 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTA..................................................... 23 2 1 5.00 5 5 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTTT.................................................... 24 2 1 5.00 5 5 0 0
..........................................................GAGGTAGTAGATTGTATAGTTAA............................................................................................................ 23 2 3 4.67 14 14 0 0
......................................................AAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 25 2 2 4.50 9 9 0 0
.........................................................TGAGGTGGTAGATTGTATAGTT.............................................................................................................. 22 1 2 4.50 9 9 0 0
.........................................................TGAGGTAGTAGATTGAATAGTT.............................................................................................................. 22 1 2 4.50 9 9 0 0
.........................................................TGAGGTAGTAGATAGTATAGTTA............................................................................................................. 23 2 2 4.50 9 9 0 0
..........................................................GAGGTAGTAGATTGTAT.................................................................................................................. 17 0 2 4.50 9 6 3 0
.........................................................TGAGGTAGTAGATTGTATCGTA.............................................................................................................. 22 2 2 4.50 9 9 0 0
.........................................................TGAGGTAGTAGGTTGTATAGTAG............................................................................................................. 23 2 5 4.40 22 22 0 0
.........................................................TGAGGTAGTAGCTTGTATAGTTA............................................................................................................. 23 2 5 4.40 22 22 0 0
.........................................................TCAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 4.00 8 8 0 0
.................................................GATCAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 30 3 1 4.00 4 4 0 0
.........................................................TGAGGCAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 4.00 8 8 0 0
.........................................................TGAGGGAGTAGATTGTATAGT............................................................................................................... 21 1 2 4.00 8 8 0 0
.........................................................TGAGGTAGTAGATTGTCTAGTTG............................................................................................................. 23 1 1 4.00 4 4 0 0
.........................................................TGAGGTCGTAGATTGTATAGTT.............................................................................................................. 22 1 2 4.00 8 8 0 0
.........................................................TGAGGTAGTAGCTTGTATAGT............................................................................................................... 21 1 4 3.75 15 14 0 1
.........................................................TGAGGTAGTAGATTGTACAGTTA............................................................................................................. 23 2 3 3.67 11 11 0 0
.........................................................TGATGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
.........................................................TGAGGTAGTAGATTGTATAGCT.............................................................................................................. 22 1 2 3.50 7 7 0 0
.......................................................TTTGAGGTAGTAGATTGTATAG................................................................................................................ 22 2 2 3.50 7 7 0 0
.........................................................TGAGGTAGTAGACTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
.........................................................TGAGGGAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 3.50 7 7 0 0
.........................................................TGAGGTACTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 5 2 0
.........................................................TGAGCTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
.........................................................TTAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 4 3 0
.........................................................TGAGGTAGGAGATTGTATAGTTA............................................................................................................. 23 2 3 3.33 10 10 0 0
.........................................................TGAGGTAGTAGATTGTGTGGTTAT............................................................................................................ 24 3 5 3.20 16 16 0 0
.......................................................AATGAGGTAGTAGATTGTATAGTTG............................................................................................................. 25 1 1 3.00 3 3 0 0
.........................................................TGAGGAAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 3.00 6 6 0 0
.........................................................TGAGGTAGAAGATTGTATAGTTA............................................................................................................. 23 2 2 3.00 6 6 0 0
....................................................CAAAATGAGGTAGTAGATTGTATAGTTA............................................................................................................. 28 3 1 3.00 3 3 0 0
.........................................................TGACGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.00 6 6 0 0
.........................................................TGAGGTAGTGGATTGTATAGTT.............................................................................................................. 22 1 2 3.00 6 6 0 0
.....................................................AAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 26 2 1 3.00 3 3 0 0
...................................................ACAAAATGAGGTAGTAGATTGTATAG................................................................................................................ 26 3 1 3.00 3 3 0 0
..........................................................GAGGTAGTAGATTGTATAGTTGT............................................................................................................ 23 0 1 3.00 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATCGTTG............................................................................................................. 23 1 1 3.00 3 3 0 0
.......................................................AATGAGGTAGTAGATTGTATAGTTA............................................................................................................. 25 2 2 3.00 6 6 0 0
...................................................TCAAAATGAGGTAGTAGGTTGTATAG................................................................................................................ 26 3 1 3.00 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATTGTT.............................................................................................................. 22 1 2 3.00 6 6 0 0
.........................................................GGAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 3.00 6 6 0 0
......................................................................................................................................CTGAGGAGTAGACTTGCTGCATTGTTTT........................... 28 0 1 3.00 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATACTT.............................................................................................................. 22 1 2 3.00 6 6 0 0
..............................................................TAGTAGATTGTATAGTTGAGG.......................................................................................................... 21 1 1 3.00 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATT................................................................................................................. 19 1 2 3.00 6 6 0 0
..................................................ATCAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 29 2 1 3.00 3 3 0 0
....................................................CAAAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 27 3 2 3.00 6 6 0 0
.........................................................TGAGGTAGTAGATTGTTTAGTTA............................................................................................................. 23 2 2 3.00 6 6 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTAT.................................................... 24 3 3 2.67 8 8 0 0
.........................................................TGAGGTAGTAGATTGTACAGT............................................................................................................... 21 1 3 2.67 8 8 0 0
.........................................................TGAGGTAGCAGATTGTATAGTTA............................................................................................................. 23 2 2 2.50 5 5 0 0
.........................................................TGAGGTAGTCGATTGTATAGTT.............................................................................................................. 22 1 2 2.50 5 5 0 0
.........................................................TGAGGTAGTAGATTATATAGTTA............................................................................................................. 23 2 2 2.50 5 5 0 0
.........................................................TGAGGTAGTAGATTGTCTAG................................................................................................................ 20 1 2 2.50 5 5 0 0
..........................................................GAGGTAGTAGGTTGTATAGTTG............................................................................................................. 22 1 4 2.50 10 10 0 0
..........................................................GAGGTAGTAGCTTGTATAGTT.............................................................................................................. 21 1 4 2.50 10 10 0 0
.........................................................TGAGGCAGTAGATTGTATAGT............................................................................................................... 21 1 2 2.50 5 4 1 0
.........................................................TGAGGTAGTAGATTGTCTAGGT.............................................................................................................. 22 2 2 2.50 5 5 0 0
.........................................................TGAGGTAGTAGATGGTATAGTT.............................................................................................................. 22 1 2 2.50 5 5 0 0
.........................................................TAAGGTAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 2.50 5 4 1 0
.........................................................TGCGGTAGTAGATTGTATAG................................................................................................................ 20 1 2 2.50 5 4 1 0
...........................................................................................................AGATAACTATACAATCTATTGCCTTC........................................................ 26 0 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATCGTATAGT............................................................................................................... 21 1 2 2.00 4 4 0 0
.........................................................TGAGGTATTAGATTGTATAGTT.............................................................................................................. 22 1 2 2.00 4 4 0 0
.................................................................................................................CTATACAATCTATTGCCTTCT....................................................... 21 1 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTATGGTTG............................................................................................................. 23 1 1 2.00 2 2 0 0
..........................................................GAGGAAGTAGATTGTATAGTT.............................................................................................................. 21 1 2 2.00 4 4 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTGTGGGG........................................................................................................ 28 0 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATAGTATAG................................................................................................................ 20 1 2 2.00 4 4 0 0
.........................................................TGAGGTAGAAGATTGTATAGTG.............................................................................................................. 22 2 2 2.00 4 4 0 0
.....................................................AAAATGAGGTAGTAGATTGTATAGTTA............................................................................................................. 27 3 1 2.00 2 2 0 0
.........................................................TGAGGTAGAAGATTGTATAGT............................................................................................................... 21 1 2 2.00 4 4 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTACA................................................... 25 3 1 2.00 2 2 0 0
...................................................TCAAAATGAGGTAGTAGATTGTATAGTTT............................................................................................................. 29 3 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATTATATAG................................................................................................................ 20 1 2 2.00 4 3 1 0
.........................................................TGAGGTAATAGATTGTATAGTTA............................................................................................................. 23 2 2 2.00 4 4 0 0
.........................................................TGAGGTAGTAGATTGTATAGGT.............................................................................................................. 22 1 2 2.00 4 4 0 0
...................................................TCAAAATGAGGTAGTAGGTTGTATAGT............................................................................................................... 27 3 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGCTTGTATAGTTG............................................................................................................. 23 1 1 2.00 2 2 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTT..................................................... 23 1 1 2.00 2 2 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTTAAA.................................................. 26 3 1 2.00 2 2 0 0
.........................................................TGACGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 2.00 4 4 0 0
..........................................................GAGGTAGTAGGTTGTATAGTTGT............................................................................................................ 23 1 2 2.00 4 4 0 0
.................................................................................................................CTATACAATCTATTGCCTTCTT...................................................... 22 2 1 2.00 2 2 0 0
.........................................................TGAGGTAGCAGATTGTATAGT............................................................................................................... 21 1 2 2.00 4 4 0 0
..........................................................................................ATTTTACCCTGTTTAGGAGATAAC........................................................................... 24 0 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATAGTATAGTTG............................................................................................................. 23 1 1 2.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTGTGGTTGT............................................................................................................ 24 2 1 2.00 2 2 0 0
.........................................................TGAGGTAGTATATTGTATAGTT.............................................................................................................. 22 1 2 2.00 4 4 0 0
...............................................................................................................AACTATACAATCTATTGCCTTCC....................................................... 23 0 1 2.00 2 2 0 0
.............................................................GTAGTAGATTGTATAGTTGAG........................................................................................................... 21 1 1 2.00 2 2 0 0
.....................................................AGAGTGAGGTAGGAGGTTGTATAGTTA............................................................................................................. 27 3 1 2.00 2 2 0 0
.........................................................TGAGATAGTAGATTGTATAGTT.............................................................................................................. 22 1 2 2.00 4 4 0 0
.........................................................TGAGGTAGTAGATTGTATAGTGA............................................................................................................. 23 2 3 2.00 6 6 0 0
.........................................................TGAGGTAGTAGATTGTATCGTC.............................................................................................................. 22 2 3 1.67 5 5 0 0
.........................................................TGAGGCAGTAGATTGTATAG................................................................................................................ 20 1 3 1.67 5 3 2 0
.........................................................TGAGGTAGTAGATTGTTTAGTC.............................................................................................................. 22 2 3 1.67 5 5 0 0
.........................................................TGAGGTAGTAGATTGTACAGTA.............................................................................................................. 22 2 3 1.67 5 5 0 0
.........................................................TGATGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.50 3 3 0 0
..........................................................GAGGTAGTAGTTTGTACAGTTGT............................................................................................................ 23 2 2 1.50 3 3 0 0
..........................................................GAGGTAGTCGATTGTATAGTT.............................................................................................................. 21 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGTATATTGTATAG................................................................................................................ 20 1 2 1.50 3 1 2 0
...........................................................AGGTAGTAGATTGTATAGTT.............................................................................................................. 20 0 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATAT................................................................................................................ 20 1 4 1.50 6 6 0 0
.........................................................TGAGGTAGAAGATTGTATAGTC.............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGAGGTTGTAGATTGTATAGTT.............................................................................................................. 22 1 2 1.50 3 3 0 0
..........................................................GAGGTAGTAGATTGTATAGTAA............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATCGTG.............................................................................................................. 22 2 2 1.50 3 3 0 0
.......................................................AATGAGGTAGTAGATTGTATAGTAA............................................................................................................. 25 3 2 1.50 3 3 0 0
.........................................................TGAAGTAGTAGATTGTATAGT............................................................................................................... 21 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTCG............................................................................................................ 24 2 2 1.50 3 0 0 3
.........................................................TGAGGTAGTAGATTGTATAGAT.............................................................................................................. 22 1 2 1.50 3 3 0 0
.......................................................AATGAGGTAGTAGATTGTATAGT............................................................................................................... 23 1 2 1.50 3 3 0 0
.........................................................TGCGGTAGTAGATTGTATAGT............................................................................................................... 21 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATGGT............................................................................................................... 21 1 4 1.50 6 6 0 0
......................................................AAATGAGGTAGTAGATTGTATAGT............................................................................................................... 24 2 2 1.50 3 3 0 0
.........................................................TGAAGTAGTAGATTGTCTAGTT.............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATCGTATTGTT.............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTAC............................................................................................................ 24 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTCTAGTA.............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGAGGAAGTAGATTGTATAGT............................................................................................................... 21 1 2 1.50 3 3 0 0
.........................................................TGAGGTCGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGCTTGTATAG................................................................................................................ 20 1 4 1.50 6 6 0 0
.........................................................TGAGGTAGTAGATTGTATAGC............................................................................................................... 21 1 2 1.50 3 3 0 0
........................................................TTGAGGTAGTAGATTGTATAGTT.............................................................................................................. 23 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATCGTAT.................................................................................................................. 18 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGGAGATTGTATAGTTG............................................................................................................. 23 1 2 1.50 3 3 0 0
.......................................................AATGAGGTCGTAGATTGTATAGTT.............................................................................................................. 24 2 2 1.50 3 3 0 0
..........................................................GAGGTAGTAGATTGTATA................................................................................................................. 18 0 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGCATAGTTA............................................................................................................. 23 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATAGAA.............................................................................................................. 22 2 2 1.50 3 3 0 0
.........................................................TGGGGTAGTAGATTGTATAG................................................................................................................ 20 1 2 1.50 3 2 1 0
.........................................................AGAGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.50 3 3 0 0
.........................................................TGAGGTAGTAGATTGGATAGTT.............................................................................................................. 22 1 2 1.50 3 3 0 0
.........................................................TGAGGTAGAAGATTGTATAG................................................................................................................ 20 1 2 1.50 3 3 0 0
..........................................................GAGGTAGTAGATTGTATGGTT.............................................................................................................. 21 1 4 1.25 5 5 0 0
.........................................................TGAGGTAGTAGGTTGTATAGTCG............................................................................................................. 23 2 4 1.25 5 2 0 3
.........................................................TGAGGTAGTAGTTTGTATAGT............................................................................................................... 21 1 5 1.20 6 6 0 0
..........................................................GAGGTAGTAGATTGTATAGTTC............................................................................................................. 22 1 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGT.................................................................................................................... 16 0 4 1.00 4 0 4 0
.........................................................TGAGGTAGTAGATTGTATTGTA.............................................................................................................. 22 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTTTAG................................................................................................................ 20 1 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAAATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
..................................................................................................................TATACAATCTATTGCCTTCCTT..................................................... 22 1 1 1.00 1 1 0 0
.......................................................TTTGAGGTAGTAGATTGTATAGTT.............................................................................................................. 24 2 2 1.00 2 2 0 0
.........................................................GGAGGTAGTAGATTGTATAGTTGA............................................................................................................ 24 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTATACTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTCGATTGTATAGT............................................................................................................... 21 1 2 1.00 2 2 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTAG.................................................... 24 2 1 1.00 1 1 0 0
................................................................................................................ACTATACAATCTATTGCCTTCCAGA.................................................... 25 3 1 1.00 1 1 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTTA.................................................... 24 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTTTAGT............................................................................................................... 21 1 2 1.00 2 2 0 0
.......................................................ATTGAGGTAGTAGATTGTATAGT............................................................................................................... 23 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGCTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTAGG........................................................................................................... 25 2 1 1.00 1 1 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTAAA................................................... 25 3 1 1.00 1 1 0 0
......................................................TAGTGAGGTAGTAGGTTGTATAGT............................................................................................................... 24 2 1 1.00 1 1 0 0
..........................................................GAGGTAGTAGAATGTATAGTT.............................................................................................................. 21 1 2 1.00 2 2 0 0
.........................................................TGAGGTATTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
..................................................ATCAAAATGAGGTAGTACATTGTATAGT............................................................................................................... 28 3 1 1.00 1 1 0 0
.........................................................TGAGGTAGTTGATTGTATAGTT.............................................................................................................. 22 1 2 1.00 2 2 0 0
........................................................TTGAGGTAGTAGATTGTATAG................................................................................................................ 21 1 2 1.00 2 2 0 0
......................................................TAGTGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 25 2 1 1.00 1 1 0 0
.................................................................................................................TTATACAATCTATTGCCTTCCTAG.................................................... 24 3 1 1.00 1 1 0 0
.........................................................TGAGGGAGTAGATTGTATAGTTG............................................................................................................. 23 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGGATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTGGATTGTATAGTTGA............................................................................................................ 24 2 1 1.00 1 1 0 0
.....................................................AAAATGAGGTAGTAGATTGTAT.................................................................................................................. 22 2 1 1.00 1 1 0 0
......................................................TAGTGAGGTAGTAGATTGTA................................................................................................................... 20 1 1 1.00 1 1 0 0
..........................................................GAGGTAGAAGATTGTATAGTTA............................................................................................................. 22 2 2 1.00 2 2 0 0
.........................................................GGAGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGCTTGTGTGGTTGT............................................................................................................ 24 3 3 1.00 3 3 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCAT..................................................... 23 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTAA.................................................................................................................. 18 1 7 1.00 7 6 1 0
...................................................TCGGAATGAGGTAGTAGATTGTATAGT............................................................................................................... 27 2 1 1.00 1 0 1 0
.........................................................TGAGGTAGCAGATTGTATAG................................................................................................................ 20 1 2 1.00 2 2 0 0
.........................................................CGAGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
..............................................................TAGTAGATTGTATAGTTGTGGGG........................................................................................................ 23 0 1 1.00 1 1 0 0
.........................................................TGAAGTAGTAGATTGTATAG................................................................................................................ 20 1 2 1.00 2 1 1 0
....................................................AAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 27 3 1 1.00 1 1 0 0
........................................................GTGAGGTAGTAGGTTGTATAGTTGT............................................................................................................ 25 1 1 1.00 1 1 0 0
.........................................................GGAGGTAGTAGCTTGTATAGTTGT............................................................................................................ 24 2 1 1.00 1 1 0 0
...........................................................................................................AGATAACTATACAATCTATTGCCTTCT....................................................... 27 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGTTTGTATAGTTG............................................................................................................. 23 1 1 1.00 1 1 0 0
.........................................................GGAGGTAGTAGCTTGTATAGTTG............................................................................................................. 23 2 1 1.00 1 1 0 0
.........................................................TTAGGTAGTAGATTGTATAGT............................................................................................................... 21 1 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTATAGTTATGCAG........................................................................................................ 28 3 1 1.00 1 1 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTAGA................................................... 25 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGACTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
...................................................ACAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 28 3 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTATGGTAG............................................................................................................. 23 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGAAGATTGTATCGTT.............................................................................................................. 22 2 2 1.00 2 2 0 0
.........................................................TGTGGTAGTAGATTGTATAGTTA............................................................................................................. 23 2 3 1.00 3 3 0 0
.........................................................TGAGGTAGTGGATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATTGTATAGAAG............................................................................................................. 23 2 1 1.00 1 1 0 0
........................................................GTGAGGTAGTAGATTGTATAGT............................................................................................................... 22 0 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGCTTGTATAGTTGT............................................................................................................ 24 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGACTGTATAG................................................................................................................ 20 1 2 1.00 2 2 0 0
.........................................................TGAGGGAGTAGATTGTATAG................................................................................................................ 20 1 2 1.00 2 2 0 0
.........................................................TGAGGTAGCAGATTGTATAGTTG............................................................................................................. 23 1 1 1.00 1 1 0 0
..............................................................TAGTAGATTGTCTAGTTGTGGGGT....................................................................................................... 24 1 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGCTTGTACAGTTG............................................................................................................. 23 2 3 1.00 3 3 0 0
..........................................................GAGGTAGTAGATTGTACAGTTA............................................................................................................. 22 2 3 1.00 3 3 0 0
.........................................................TGAGGTAGTAGATTGTATCGTGG............................................................................................................. 23 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATCGTATAG................................................................................................................ 20 1 2 1.00 2 2 0 0
.................................................................................................................CTATACAATCTATTGCCTACCTTAA................................................... 25 3 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGTAGA............................................................................................................ 24 2 1 1.00 1 1 0 0
.....................................................AAAATGAGGTCGTAGATTGTATAGTT.............................................................................................................. 26 3 1 1.00 1 1 0 0
.........................................................TGAGGTAGTATATTGTATAGT............................................................................................................... 21 1 2 1.00 2 0 2 0
....................................................CAAAATGAGGTAGTAGATTGTATAGTT.............................................................................................................. 27 2 1 1.00 1 1 0 0
.................................................................................................................CCATACAATCTATTGCCTTCCATTA................................................... 25 3 1 1.00 1 1 0 0
.................................................................................................................CTATACAATCTATTGCCTTCCTTTAA.................................................. 26 3 1 1.00 1 1 0 0
..........................................................GAGGTAGTCGATTGTATAGTTA............................................................................................................. 22 2 2 1.00 2 2 0 0
.........................................................AGAGGTAGTAGATTGTATAGT............................................................................................................... 21 1 2 1.00 2 2 0 0
.................................................................................................................CTATACAATCTATTGCCTTAC....................................................... 21 1 1 1.00 1 1 0 0
.........................................................TGAGGTGGTAGATTGTATAGTTA............................................................................................................. 23 2 2 1.00 2 2 0 0
.........................................................TGAGGTAGTAGATCGTATAGTTGA............................................................................................................ 24 2 1 1.00 1 1 0 0
.........................................................TGAGGTAGTAGATTGTATAGTAGTGGG......................................................................................................... 27 1 1 1.00 1 1 0 0

Anti-sense strand reads

TGGAAAGAACTTTCTCTGACTACAAATAAGGTCTTCTTTTTTTAACGAGATAGTCTCACTCCATCATCTAACATATCAACACCCCATCACTAAAATGGGACAAATCCTCTATTGATATGTTAGATAACGGAAGGGACTCCTCATCTGAACGACGTAACAAAATAGATCTCCTATAATATTTGAATCCAC
*****************************************.(((((((.((((...((((((((((((((((((((((((((((((.....))))))).........)))))))))))))))))))))))..)))))))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
..............................................................................................................ATTGATATGTTAGATGACGGAG......................................................... 22 2 7 0.14 1 1
..............................................................................................................ATTGATATGTTAGAT................................................................ 15 0 11 0.09 1 1

Generated: 04/30/2015 at 05:37 PM