ID:

rno-let-7e

 Coordinate:

chr1:59704381-59704473 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.9 -44.6 -44.6

Sense Strand Reads

CTCCCTACTTCTGGTCTCCCATCAATCCATCTGTCAATCTGCCCACCTGCCGCGCCCCCCGGGCTGAGGTAGGAGGTTGTATAGTTGAGGAAGACACCCGAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGCGCCCTGCACTGGAAGGGGCCGGCGGGGACCCCAGGTCCACACCACTGCTCCAG
*************************************************..((((..((.(((..(((.((((((((((((((((.((..................)))))))))))))))))).)))..))).))..))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
................................................................TGAGGTAGGAGGTTGTATAGTT........................................................................................................... 22 0 1 6759.00 6759 6701 27 31
................................................................TGAGGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 0 1 2061.00 2061 2045 16 0
................................................................TGAGGTAGGAGGTTGTATAGTTA.......................................................................................................... 23 1 1 1965.00 1965 1957 8 0
................................................................TGAGGTAGGAGGTTGTATAGTTGT......................................................................................................... 24 1 1 1491.00 1491 1486 4 1
................................................................TGAGGTAGGAGGTTGTATAGT............................................................................................................ 21 0 1 1302.00 1302 1248 20 34
................................................................TGAGGTAGGAGGTTGTATAGTTT.......................................................................................................... 23 1 3 857.67 2573 2556 12 5
................................................................TGAGGTAGGAGGTTGTATAG............................................................................................................. 20 0 1 710.00 710 683 9 18
................................................................TGAGGTAGGAGGTTGTATAGTTAA......................................................................................................... 24 1 1 658.00 658 658 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGA......................................................................................................... 24 0 1 494.00 494 492 1 1
................................................................TGAGGTAGGAGGTTGTATAGTTAT......................................................................................................... 24 2 2 287.50 575 573 2 0
.................................................................GAGGTAGGAGGTTGTATAGTT........................................................................................................... 21 0 1 227.00 227 225 0 2
................................................................TGAGGTAGGAGGTTGTAT............................................................................................................... 18 0 1 213.00 213 199 11 3
................................................................TGAGGTAGGAGGTTGTATAGTAA.......................................................................................................... 23 2 2 179.00 358 358 0 0
................................................................TGAGGTAGGAGGTTGTATAGTA........................................................................................................... 22 1 1 139.00 139 139 0 0
................................................................TGAGGTAGGAGGTTGTATAA............................................................................................................. 20 1 1 130.00 130 127 0 3
................................................................TGAGGTAGGAGGTTGTATAGA............................................................................................................ 21 1 1 104.00 104 100 0 4
................................................................TGAGGTAGTAGGTTGTATAGTTG.......................................................................................................... 23 1 4 95.75 383 365 18 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAA........................................................................................................ 25 2 1 93.00 93 92 1 0
................................................................TGAGGTAGGAGGTTGTATAGTTTA......................................................................................................... 24 1 2 82.50 165 164 0 1
.................................................................GAGGTAGGAGGTTGTATAGTTA.......................................................................................................... 22 1 1 73.00 73 73 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAG......................................................................................................... 24 2 1 68.00 68 68 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGTT........................................................................................................... 23 1 2 56.50 113 111 1 1
.................................................................GAGGTAGGAGGTTGTATAGTTG.......................................................................................................... 22 0 1 53.00 53 53 0 0
................................................................TGAGGTAGGAGGTTGTATA.............................................................................................................. 19 0 1 52.00 52 52 0 0
.................................................................GAGGTAGGAGGTTGTATAGT............................................................................................................ 20 0 1 49.00 49 45 0 4
.................................................................GAGGTAGGAGGTTGTATAGTTGT......................................................................................................... 23 1 1 44.00 44 44 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAAA......................................................................................................... 24 2 1 42.00 42 42 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAT.......................................................................................................... 23 2 4 39.50 158 158 0 0
................................................................TGAGGTAGGAGGTTGTATCGTT........................................................................................................... 22 1 1 39.00 39 38 1 0
................................................................TGAGGTAGGAGGTTGTATAGAA........................................................................................................... 22 2 2 38.00 76 75 1 0
................................................................TGAGGTAGGAGGTTGTATAGTTGTT........................................................................................................ 25 2 1 34.00 34 34 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGTTG.......................................................................................................... 24 1 1 33.00 33 33 0 0
................................................................TGAGGTAGGAGGTTGTATGGTT........................................................................................................... 22 1 3 30.67 92 89 3 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAT........................................................................................................ 25 2 1 30.00 30 30 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTGA......................................................................................................... 23 0 1 29.00 29 29 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAG.......................................................................................................... 23 1 1 26.00 26 25 1 0
...............................................................TTGAGGTAGGAGGTTGTATAGT............................................................................................................ 22 1 1 26.00 26 26 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGAA........................................................................................................ 25 1 1 25.00 25 25 0 0
.................................................................GAGGTAGGAGGTTGTATAG............................................................................................................. 19 0 1 24.00 24 24 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTT.......................................................................................................... 22 1 3 23.67 71 70 1 0
................................................................TGAGGTAGGAGGTTGTATAGTTC.......................................................................................................... 23 1 1 23.00 23 23 0 0
................................................................TGAGGTAGTAGGTTGTATAGTTGA......................................................................................................... 24 1 2 22.50 45 32 13 0
................................................................TGAGGTAGGAGGTTGTATAGTTGAT........................................................................................................ 25 1 1 22.00 22 22 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTAA......................................................................................................... 23 1 1 21.00 21 21 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTTAT........................................................................................................ 25 2 2 20.00 40 40 0 0
................................................................TGAGGTAGGAGGTTGTATAGTG........................................................................................................... 22 1 1 18.00 18 18 0 0
................................................................TGAGGGAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 18.00 18 18 0 0
................................................................TGAGGTAGGAGGTTGTCTAGTT........................................................................................................... 22 1 2 17.50 35 35 0 0
................................................................TGAGGTAGGAGGTTGTATCGTTG.......................................................................................................... 23 1 1 17.00 17 17 0 0
................................................................TGAGGTAGGAGGTCGTATAGTT........................................................................................................... 22 1 1 17.00 17 17 0 0
................................................................TGAGGTAGAAGGTTGTATAGTT........................................................................................................... 22 1 3 16.67 50 48 2 0
................................................................TGAGGTAGGAGGTTGTATAGTC........................................................................................................... 22 1 1 15.00 15 15 0 0
................................................................TGAGGTAGGAGGTAGTATAGTT........................................................................................................... 22 1 1 15.00 15 15 0 0
................................................................TGAGGTAGGCGGTTGTATAGTT........................................................................................................... 22 1 1 14.00 14 14 0 0
................................................................TGAGGAAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 14.00 14 14 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTTAA........................................................................................................ 25 2 3 14.00 42 42 0 0
................................................................TGCGGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 14.00 14 14 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAGA......................................................................................................... 24 1 1 14.00 14 14 0 0
................................................................TGAGGTAGGAGATTGTATAGTT........................................................................................................... 22 1 3 13.00 39 37 2 0
.................................................................GAGGTAGGAGGTTGTATAGTTAT......................................................................................................... 23 2 2 12.00 24 24 0 0
................................................................TGAGGTAGGAGGTTGTATCGTTA.......................................................................................................... 23 2 1 12.00 12 12 0 0
................................................................TGAGGTAGCAGGTTGTATAGTT........................................................................................................... 22 1 3 12.00 36 32 4 0
...............................................................ATGAGGTAGGAGGTTGTATAGTTGT......................................................................................................... 25 2 2 12.00 24 24 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGTTA.......................................................................................................... 24 2 2 11.50 23 23 0 0
................................................................TGAGGTAGGAGGTTGTATAGAAA.......................................................................................................... 23 3 6 11.50 69 69 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGT............................................................................................................ 22 1 2 11.50 23 16 6 1
................................................................TGAGGTAGGGGGTTGTATAGTT........................................................................................................... 22 1 1 11.00 11 10 0 1
................................................................TGAGGTAGGAGGTTGTATAGTGA.......................................................................................................... 23 2 2 11.00 22 22 0 0
................................................................TGAGGTAGGAGGTTGTATAGAAAA......................................................................................................... 24 3 1 11.00 11 11 0 0
................................................................TGAGGTAGGAGGTTGTATCGTTGT......................................................................................................... 24 2 1 10.00 10 10 0 0
................................................................TGAGGTAGGAGGTTGTATGGTTA.......................................................................................................... 23 2 3 9.67 29 28 1 0
.................................................................GAGGTAGGAGGTTGTATAGTAA.......................................................................................................... 22 2 2 9.50 19 19 0 0
................................................................TGAGGTAGGAGGTTGTCTAGTTG.......................................................................................................... 23 1 1 9.00 9 8 1 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCC.............................................................. 22 0 1 9.00 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAGTCG.......................................................................................................... 23 1 1 9.00 9 8 1 0
................................................................TGAGGTAGGAGGTTGCATAGTT........................................................................................................... 22 1 1 9.00 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGTTT....................................................................................................... 26 3 1 9.00 9 9 0 0
................................................................TGAGGTAGGAGGTTGTCTAGTTGT......................................................................................................... 24 2 1 9.00 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAAA............................................................................................................ 21 2 4 8.50 34 33 0 1
................................................................TGAGGTAGGAGGTTGTCTAGTTA.......................................................................................................... 23 2 2 8.50 17 17 0 0
..............................................................AATGAGGTAGGAGGTTGTATAGTT........................................................................................................... 24 2 2 8.50 17 17 0 0
................................................................TGAGGTAGGAGGTTGTATCGT............................................................................................................ 21 1 1 8.00 8 8 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAGT........................................................................................................ 25 3 1 8.00 8 8 0 0
................................................................TGAGGTAGGAGGTTGTATAGTCA.......................................................................................................... 23 2 1 8.00 8 8 0 0
................................................................TGAGGTAGGAGGTTGTAAA.............................................................................................................. 19 1 4 7.25 29 28 0 1
................................................................TGAGGTAGGACGTTGTATAGTT........................................................................................................... 22 1 1 7.00 7 7 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAGT......................................................................................................... 24 2 1 7.00 7 7 0 0
................................................................TGAGGTAGGAGGTTGTATAGTAAAA........................................................................................................ 25 3 1 7.00 7 7 0 0
................................................................TGAGGTAGGAGGTTGTACAGTT........................................................................................................... 22 1 1 7.00 7 7 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCT.............................................................. 22 1 1 7.00 7 7 0 0
................................................................TGAGGTAGGAGGTAGTATAGTTG.......................................................................................................... 23 1 1 7.00 7 7 0 0
................................................................TGCGGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 7.00 7 7 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCCA............................................................. 23 1 1 7.00 7 7 0 0
.....................................................................TAGGAGGTTGTATAGTTGAGGAA..................................................................................................... 23 0 1 7.00 7 7 0 0
................................................................TGAGGTAGGAAGTTGTATAGTT........................................................................................................... 22 1 1 7.00 7 7 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGTAT....................................................................................................... 26 3 2 6.50 13 13 0 0
................................................................TGAGGCAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 6.00 6 6 0 0
................................................................TGAGGTCGGAGGTTGTATAGTT........................................................................................................... 22 1 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATCGTTAA......................................................................................................... 24 2 1 6.00 6 6 0 0
.................................................................GAGGTAGGAGGTTGTATAGTAAA......................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAAT............................................................................................................ 21 1 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTG.......................................................................................................... 23 1 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATCG............................................................................................................. 20 1 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAGCT........................................................................................................... 22 1 1 6.00 6 6 0 0
................................................................CGAGGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 6.00 6 6 0 0
................................................................TGAGGAAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................TGAGGCAGGAGGTTGTATAGT............................................................................................................ 21 1 1 6.00 6 6 0 0
................................................................TGCGGTAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................TGAGGCAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTAGTATAGTTA.......................................................................................................... 23 2 1 6.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGTA........................................................................................................ 25 2 2 6.00 12 12 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTCT......................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................GAGGTAGGAGGTTGTAT............................................................................................................... 17 0 2 5.50 11 11 0 0
................................................................TGAGGTAGGCGGTTGTATAGTTGT......................................................................................................... 24 2 1 5.00 5 5 0 0
................................................................TGAGGTAGGGGGTTGTATAGTTA.......................................................................................................... 23 2 1 5.00 5 5 0 0
................................................................TGAGGAAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 5.00 5 4 1 0
................................................................TGAGGTAGGAGGTTGTATAGGA........................................................................................................... 22 2 1 5.00 5 4 0 1
................................................................TGAGGTAGGAGGTTATATAGTT........................................................................................................... 22 1 1 5.00 5 5 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTC............................................................... 21 0 1 5.00 5 5 0 0
................................................................TGAGGTAGGAGGTTCTATAGTT........................................................................................................... 22 1 1 5.00 5 5 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGTTGA......................................................................................................... 25 1 1 5.00 5 5 0 0
................................................................TGATGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 5.00 5 5 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCCT............................................................. 23 1 1 5.00 5 5 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAC......................................................................................................... 24 2 1 5.00 5 5 0 0
................................................................TGAGGCAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 5.00 5 4 1 0
................................................................TGAGGTAGGAGGTTGTATAGTTATT........................................................................................................ 25 3 4 5.00 20 20 0 0
...............................................................ATGAGGTAGGAGGTTGTATAG............................................................................................................. 21 1 2 5.00 10 9 0 1
................................................................TGAGGTAGGAGGTTGTATAGTTAAAT....................................................................................................... 26 3 1 5.00 5 5 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGTTAA......................................................................................................... 25 2 1 5.00 5 5 0 0
................................................................TGAGGTAGGAGCTTGTATAGTTG.......................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................TGAGGTAGGAGCTTGTATAGTT........................................................................................................... 22 1 1 5.00 5 5 0 0
................................................................TGAGGTAGGAGGTTGTGTGGTTAA......................................................................................................... 24 3 6 4.83 29 29 0 0
................................................................TGAGGTAGGAGGTTGTCTAGT............................................................................................................ 21 1 2 4.50 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAGAAG.......................................................................................................... 23 2 2 4.50 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAT............................................................................................................. 20 1 2 4.50 9 9 0 0
................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................... 23 2 5 4.40 22 22 0 0
................................................................TGAGGTAGAAGGTTGTATAGTTA.......................................................................................................... 23 2 4 4.25 17 15 2 0
................................................................TGAGGTAGGAGGTTGTATAGTTGC......................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGAAT....................................................................................................... 26 2 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTGT......................................................................................................... 24 2 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTATCGTTGA......................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGGGGTTGTATAGTTGT......................................................................................................... 24 2 1 4.00 4 4 0 0
................................................................TGGGGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 4.00 4 4 0 0
................................................................TGAGGGAGGAGGTTGTATAGTTGT......................................................................................................... 24 2 1 4.00 4 4 0 0
................................................................TTAGGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTATAGTCGT......................................................................................................... 24 2 1 4.00 4 4 0 0
.................................................................GAGGTAGGAGGTTGTATAGTAGA......................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTCGTATAGT............................................................................................................ 21 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTCTATAGTTG.......................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGG......................................................................................................... 24 1 1 4.00 4 4 0 0
................................................................TGAAGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTACAGTTG.......................................................................................................... 23 1 1 4.00 4 4 0 0
................................................................TGAGTTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 4.00 4 4 0 0
........................................................CCTCCGTCTGAGGTAGGAGGTTGTAT............................................................................................................... 26 3 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTTTATAGTT........................................................................................................... 22 1 1 4.00 4 3 1 0
................................................................TGAGGTAGGAGGTTGTGTAGTT........................................................................................................... 22 1 1 4.00 4 4 0 0
...............................................................TTGAGGTAGGAGGTTGTATAGTT........................................................................................................... 23 1 1 4.00 4 4 0 0
..............................................................TGTGAGGTAGGAGGTTGTATAGT............................................................................................................ 23 2 1 4.00 4 4 0 0
................................................................TGAGGTAGGAGGTTGTATCGTA........................................................................................................... 22 2 1 4.00 4 4 0 0
................................................................TGAGGTAGAAGGTTGTATAGT............................................................................................................ 21 1 3 3.67 11 9 2 0
................................................................TGAGGTAGGAGGTTGTATCGTTT.......................................................................................................... 23 2 5 3.60 18 18 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGTAA....................................................................................................... 26 3 2 3.50 7 7 0 0
................................................................TGAGGTAGGAGGTTGTATT.............................................................................................................. 19 1 2 3.50 7 7 0 0
................................................................TGAGGTAGGAGGTTGTATAGTGT.......................................................................................................... 23 2 3 3.33 10 10 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAGA........................................................................................................ 25 3 3 3.33 10 10 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTTC......................................................................................................... 24 2 3 3.33 10 10 0 0
................................................................TGAGGTAGGAGATTGTATAGTTA.......................................................................................................... 23 2 3 3.33 10 10 0 0
................................................................TGAGGAAGGAGGTTGTATAGT............................................................................................................ 21 1 1 3.00 3 2 1 0
................................................................TGGGGTAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATGGTTAA......................................................................................................... 24 2 2 3.00 6 5 1 0
................................................................TGAGGTAGGAGGTTGTTTAGTT........................................................................................................... 22 1 1 3.00 3 3 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCTAT............................................................ 24 3 1 3.00 3 3 0 0
................................................................TGGGGTAGGAGGTTGTATAGTTGT......................................................................................................... 24 2 1 3.00 3 2 1 0
................................................................TGAGGGAGGAGGTTGTATAGTTT.......................................................................................................... 23 2 3 3.00 9 9 0 0
................................................................TGAGGTAGGAGGTTGTATAGATA.......................................................................................................... 23 2 1 3.00 3 3 0 0
..............................................................TTTGAGGTAGGAGGTTGTATAG............................................................................................................. 22 2 1 3.00 3 3 0 0
................................................................TGAGGGAGGAGGTTGTATAGTTAA......................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGGT........................................................................................................ 25 2 1 3.00 3 3 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTTT.............................................................. 22 2 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGCATAGT............................................................................................................ 21 1 1 3.00 3 3 0 0
................................................................TGAGGTGGGAGGTTGTATAGTT........................................................................................................... 22 1 1 3.00 3 3 0 0
...............................................................TTGAGGTAGGAGGTTGTATAG............................................................................................................. 21 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTATATAGT............................................................................................................ 21 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTAA............................................................................................................... 18 1 17 3.00 51 51 0 0
................................................................TGAGGTAGGAAGTTGTATAGTTG.......................................................................................................... 23 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTAGTATAGTTGT......................................................................................................... 24 2 1 3.00 3 3 0 0
.................................................................GAGGAAGGAGGTTGTATAGTT........................................................................................................... 21 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATAGTCAA......................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATGGT............................................................................................................ 21 1 3 3.00 9 9 0 0
................................................................TGAGGTAGGAGGTTATATAGTTG.......................................................................................................... 23 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTA................................................................................................................ 17 0 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTTTAGT............................................................................................................ 21 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGCGGTTGTATAGTTG.......................................................................................................... 23 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGCTTGTATAG............................................................................................................. 20 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTGA......................................................................................................... 24 1 1 3.00 3 3 0 0
................................................................TGACGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 3.00 3 3 0 0
................................................................TGCGGTAGGAGGTTGTATAGTTGT......................................................................................................... 24 2 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATAGAT........................................................................................................... 22 1 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAAA....................................................................................................... 26 3 2 3.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAATT....................................................................................................... 26 3 1 3.00 3 3 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAC........................................................................................................ 25 2 1 3.00 3 3 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTTA......................................................................................................... 23 1 2 3.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAAAAGA......................................................................................................... 24 3 4 2.75 11 11 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTT.......................................................................................................... 23 2 3 2.67 8 8 0 0
................................................................TGAGGGAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 2 2.50 5 5 0 0
.................................................................GAGGTAGTAGGTTGTATAGTTG.......................................................................................................... 22 1 4 2.50 10 10 0 0
................................................................TGAGGTAGGAGGTTGTATAGAGA.......................................................................................................... 23 3 3 2.33 7 7 0 0
................................................................TGAGGTAGGAGGTTGTCTAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAAAT........................................................................................................... 22 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTGCA........................................................................................................ 25 2 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGA............................................................................................................ 20 1 2 2.00 4 4 0 0
................................................................TGAGGTACGAGGTTGTATAGTTGT......................................................................................................... 24 2 1 2.00 2 2 0 0
................................................................TGAGGTGGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTGAA........................................................................................................ 24 1 1 2.00 2 2 0 0
................................................................GGAGGTAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGGTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGCTTGTATAGTTC.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGACGTAGGAGGTTGTATAGT............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTTTAG............................................................................................................. 20 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGCTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGGGGTTGTATAGT............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAG........................................................................................................ 25 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTTTAGTTGT......................................................................................................... 24 2 1 2.00 2 2 0 0
................................................................TGAGGGAGGAGGTTGTATAG............................................................................................................. 20 1 2 2.00 4 4 0 0
.................................................................GAGGTAGGCGGTTGTATAGTTA.......................................................................................................... 22 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTAA......................................................................................................... 24 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTATATAG............................................................................................................. 20 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTAAGAA...................................................................................................... 27 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGACGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 1 1 0
................................................................TGAGGTAGGAGGTTGTGTAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGAATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGGGGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTCA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGATGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGAGGTAGAAGGTTGTATAG............................................................................................................. 20 1 3 2.00 6 6 0 0
................................................................TGAGGTAGGAGGTTGTATAGAG........................................................................................................... 22 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTTCCT........................................................................................................ 25 3 1 2.00 2 2 0 0
................................................................TGAGGGAGGAGGTTGTATAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGCTTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTATGAGGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGCTTGTATAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGTAGGTTGTATAGTTGAA........................................................................................................ 25 2 3 2.00 6 6 0 0
..............................................................ATTGAGGTAGGAGGTTGTATAGTT........................................................................................................... 24 2 1 2.00 2 2 0 0
...............................................................GTGAGGTAGGAGGTTGTATA.............................................................................................................. 20 1 1 2.00 2 2 0 0
................................................................TGAGGTAGCAGGTTGTATAGT............................................................................................................ 21 1 3 2.00 6 6 0 0
................................................................TGATGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................AGAGGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTAGTATAGTTAA......................................................................................................... 24 2 1 2.00 2 2 0 0
................................................................TGAGGTAAGAGGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
...............................................................ATGCGGTAGGAGGTTGTATAGTTG.......................................................................................................... 24 2 1 2.00 2 2 0 0
..............................................................................................................TATACGGCCTCCTAGCTTTCCA............................................................. 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGTGGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATACTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTGTT........................................................................................................ 24 2 1 2.00 2 2 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCCAA............................................................ 24 2 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATA.............................................................................................................. 18 0 1 2.00 2 2 0 0
................................................................TGAGGTAGCAGGTTGTATAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGCGGTAGGAGGTTGTATAGT............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGAGGTAGAAGGTTGTATAGTTAA......................................................................................................... 24 2 2 2.00 4 4 0 0
................................................................CGAGGTAGGAGGTTGTATAGT............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGATGTAGGAGGTTGTATAGT............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGAGGGAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGAAGTAGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGG............................................................................................................ 21 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGCTGTATAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGATTGTATAGTTAA......................................................................................................... 24 2 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTAG......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................CGAGGTAGGAGGTTGTATAGTTG.......................................................................................................... 23 1 1 2.00 2 2 0 0
................................................................TGAGGTGGGAGGTTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTTGGAGGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTC.......................................................................................................... 22 1 1 2.00 2 2 0 0
.......................................................................GGAGGTTGTATAGTTGAGGAA..................................................................................................... 21 0 1 2.00 2 2 0 0
.................................................................GAGGTAGGAGGTTGTATAGTTGTTT....................................................................................................... 25 3 1 2.00 2 2 0 0
................................................................TGAGGTAGGATGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGCTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGAATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAAGTTGTATAGTTA.......................................................................................................... 23 2 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATATTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGTTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
.................................................................GAGGTAGGCGGTTGTATAGT............................................................................................................ 20 1 1 2.00 2 2 0 0
..............................................................TTTGAGGTAGGAGGTTGTATAGT............................................................................................................ 23 2 1 2.00 2 2 0 0
.............................................................................................................CTATACGGCCTCCTAGCTTTCCATT........................................................... 25 3 1 2.00 2 2 0 0
................................................................GGAGGTAGGAGGTTGTATAGTT........................................................................................................... 22 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTCGTATAG............................................................................................................. 20 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATGGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAAGTAGGAGGTTGTATAGTTGT......................................................................................................... 24 2 1 2.00 2 2 0 0
................................................................AGAGGTAGGAGGTTGTATAGTTGA......................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................TGAGGTAGGAGGTTGTATAGTATA......................................................................................................... 24 2 3 1.67 5 5 0 0
................................................................TGAGGTAGGAGGTTGTATGG............................................................................................................. 20 1 3 1.67 5 4 0 1
...............................................................ATGAGGTAGGAGGTTGTATAGTAA.......................................................................................................... 24 3 3 1.67 5 5 0 0
................................................................TGAGGTAGCAGGTTGTATAGTTA.......................................................................................................... 23 2 3 1.67 5 5 0 0
................................................................TGAGGTAGGAGGTTGTCTAGTC........................................................................................................... 22 2 2 1.50 3 3 0 0
................................................................TGAGGTAGGAGATTGTATAGTTG.......................................................................................................... 23 1 2 1.50 3 3 0 0
................................................................TGAGGTAGGAGGTTGTCTAG............................................................................................................. 20 1 2 1.50 3 3 0 0
...............................................................ATGAGGTAGGAGGTTGTATAGA............................................................................................................ 22 2 2 1.50 3 3 0 0
................................................................TGAGGTAGGAGGTTGTAAAG............................................................................................................. 20 1 2 1.50 3 3 0 0
................................................................TGAGGAAGGAGGTTGTATAGTTT.......................................................................................................... 23 2 4 1.50 6 6 0 0
................................................................TGAGGGAGGAGGTTGTATAGT............................................................................................................ 21 1 2 1.50 3 3 0 0
................................................................TGAGGTAGGAGGTCGTATAGTTAT......................................................................................................... 24 3 2 1.50 3 3 0 0
.................................................................GAGGTAGTAGGTTGTATAGTTGA......................................................................................................... 23 1 2 1.50 3 3 0 0
................................................................TGCGGTAGGAGGTTGTATAGTTT.......................................................................................................... 23 2 3 1.33 4 4 0 0

Anti-sense strand reads

GAGGGATGAAGACCAGAGGGTAGTTAGGTAGACAGTTAGACGGGTGGACGGCGCGGGGGGCCCGACTCCATCCTCCAACATATCAACTCCTTCTGTGGGCTCCTCTAGTGATATGCCGGAGGATCGAAAGGGGTCCGACGCGGGACGTGACCTTCCCCGGCCGCCCCTGGGGTCCAGGTGTGGTGACGAGGTC
***********************************************..((((..((.(((..(((.((((((((((((((((.((..................)))))))))))))))))).)))..))).))..))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:29 PM