ID:

rno-let-7d

 Coordinate:

chr17:16419980-16420077 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.7 -51.6 -51.3

Sense Strand Reads

AACAGGTATGTGAAGTGCGTCCGCCAAGTAGAAGACCAGCAAGAATACAGTGGGCTCCTAGGAAGAGGTAGTAGGTTGCATAGTTTTAGGGCAGAGATTTTGCCCACAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCCTTATCATACCAGCATACAGTTCCATGCGTGTAAGCAAGAGTTCTTCGTGCAG
************************************************...((((.(((((((.((((((((((((((.((((((...(((((((...)))))))..........)))))).))))))))))))))))))))))))).......******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
...............................................................AGAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 0 1 19247.00 19247 19056 152 39
...............................................................AGAGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 1 1 6762.00 6762 6738 4 20
...............................................................AGAGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 0 1 5282.00 5282 5230 40 12
...............................................................AGAGGTAGTAGGTTGCATAGT.................................................................................................................. 21 0 1 2812.00 2812 2680 125 7
...............................................................AGAGGTAGTAGGTTGCATAGTTAA............................................................................................................... 24 2 1 1160.00 1160 1158 2 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCT........................................................... 22 0 1 1107.00 1107 1092 5 10
...............................................................AGAGGTAGTAGGTTGCATAG................................................................................................................... 20 0 1 963.00 963 909 54 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAT............................................................................................................... 24 1 1 595.00 595 594 0 1
................................................................GAGGTAGTAGGTTGCATAGTT................................................................................................................. 21 0 1 471.00 471 464 7 0
...............................................................AGAGGTAGTAGGTTGCATAGTAA................................................................................................................ 23 2 1 352.00 352 352 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTT............................................................................................................... 24 0 1 274.00 274 273 1 0
...............................................................AGAGGTAGTAGGTTGCATAGTA................................................................................................................. 22 1 1 246.00 246 245 1 0
...............................................................AGAGGTAGTAGGTTGCATAGTTG................................................................................................................ 23 1 1 220.00 220 220 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAA.............................................................................................................. 25 2 1 191.00 191 189 2 0
.....................................................................................................................CTATACGACCTGCTGCCTTTC............................................................ 21 0 1 168.00 168 160 6 2
...............................................................AGAGGTAGTAGGTTGCATAGTTTA............................................................................................................... 24 1 1 167.00 167 166 1 0
...............................................................AGAGGTAGTAGGTTGCATCGTT................................................................................................................. 22 1 1 164.00 164 164 0 0
..............................................................AAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 23 0 1 158.00 158 150 0 8
................................................................GAGGTAGTAGGTTGCATAGTTA................................................................................................................ 22 1 1 154.00 154 153 1 0
...............................................................AGAGGTAGTAGGTTGCATAGTAT................................................................................................................ 23 1 1 133.00 133 132 0 1
................................................................GAGGTAGTAGGTTGCATAGTTT................................................................................................................ 22 0 1 132.00 132 129 3 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAG............................................................................................................... 24 2 1 118.00 118 118 0 0
...............................................................AGAGGTAGTAGGTTGCATAGA.................................................................................................................. 21 1 1 116.00 116 107 9 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCA........................................................... 22 1 1 107.00 107 107 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTT................................................................................................................. 22 1 1 102.00 102 102 0 0
...............................................................AGAGGTAGTAGGTTGCATAA................................................................................................................... 20 1 1 92.00 92 91 1 0
.....................................................................................................................CTATACGACCTGCTGCCTTT............................................................. 20 0 1 82.00 82 82 0 0
...............................................................AGAGGTAGTAGGTTGCATA.................................................................................................................... 19 0 1 73.00 73 63 10 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTA.......................................................... 23 1 1 72.00 72 67 0 5
...............................................................AGAGGTAGTAGGTTGCAT..................................................................................................................... 18 0 1 70.00 70 67 3 0
...............................................................AGAGGTAGTAGGTCGCATAGTT................................................................................................................. 22 1 1 69.00 69 69 0 0
...............................................................AGAGGTAGTAGGTAGCATAGTT................................................................................................................. 22 1 1 69.00 69 69 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTC................................................................................................................. 22 1 1 67.00 67 67 0 0
...............................................................AGAGGGAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 65.00 65 65 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTA................................................................................................................ 23 2 1 65.00 65 65 0 0
......................................................................................................................TATACGACCTGCTGCCTTTCT........................................................... 21 0 1 63.00 63 62 0 1
...............................................................AGAGGTAGTAGGTTGCATAGTTGA............................................................................................................... 24 2 1 59.00 59 59 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTGT............................................................................................................... 24 1 1 59.00 59 59 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTT.......................................................... 23 0 1 58.00 58 58 0 0
................................................................GAGGTAGTAGGTTGCATAGT.................................................................................................................. 20 0 1 56.00 56 54 2 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTAA.............................................................................................................. 25 1 1 52.00 52 52 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTT................................................................................................................ 23 1 1 51.00 51 51 0 0
..............................................................AAGAGGTAGTAGGTTGCATAGTTA................................................................................................................ 24 1 1 50.00 50 50 0 0
...............................................................AGAGGTAGGAGGTTGCATAGTT................................................................................................................. 22 1 1 47.00 47 47 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTAT......................................................... 24 2 1 46.00 46 46 0 0
...............................................................AGAGGTAGAAGGTTGCATAGTT................................................................................................................. 22 1 1 45.00 45 45 0 0
...............................................................AGAGGCAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 44.00 44 44 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTTA................................................................................................................ 23 2 1 43.00 43 43 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAT.............................................................................................................. 25 3 1 42.00 42 42 0 0
.................................................................AGGTAGTAGGTTGCATAGTT................................................................................................................. 20 0 1 37.00 37 37 0 0
...............................................................AGCGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 37.00 37 36 0 1
..............................................................AAGAGGTAGTAGGTTGCATAGTTT................................................................................................................ 24 0 1 36.00 36 36 0 0
...............................................................CGAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 35.00 35 35 0 0
...............................................................AGAGGTAGCAGGTTGCATAGTT................................................................................................................. 22 1 1 35.00 35 35 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTT.............................................................................................................. 25 1 1 34.00 34 34 0 0
...............................................................AGAGGAAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 34.00 34 34 0 0
...............................................................AGAGGTAGTAGATTGCATAGTT................................................................................................................. 22 1 1 33.00 33 33 0 0
...............................................................AGAGGTAGTAGGTTACATAGTT................................................................................................................. 22 1 1 33.00 33 33 0 0
...............................................................TGAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 3 30.33 91 90 0 1
.....................................................................................................................CTATACGACCTGCTGCCTTTCTAA......................................................... 24 1 1 30.00 30 30 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTTT................................................................................................................ 23 1 1 30.00 30 30 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAGA.............................................................................................................. 25 2 1 29.00 29 29 0 0
...............................................................AGAGGTAGTAGGCTGCATAGTT................................................................................................................. 22 1 1 29.00 29 29 0 0
...............................................................AGGGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 29.00 29 29 0 0
...............................................................AGAGGTAGTAGGTCGCATAGTTA................................................................................................................ 23 2 1 28.00 28 28 0 0
...............................................................AGAGGTAGTAGCTTGCATAGTT................................................................................................................. 22 1 1 27.00 27 27 0 0
..............................................................AAGAGGTAGTAGGTTGCATAGT.................................................................................................................. 22 0 1 27.00 27 26 1 0
.....................................................................................................................CTATACGACCTGCTGCCTTTTT........................................................... 22 1 1 27.00 27 26 0 1
................................................................GAGGTAGTAGGTTGCATAG................................................................................................................... 19 0 1 26.00 26 24 1 1
...............................................................AGAGGTAGTACGTTGCATAGTT................................................................................................................. 22 1 1 26.00 26 26 0 0
...............................................................AGAGGTAGTAAGTTGCATAGTT................................................................................................................. 22 1 1 26.00 26 26 0 0
...............................................................AGAGGTAGTAGGTAGCATAGTTA................................................................................................................ 23 2 1 26.00 26 26 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTC................................................................................................................ 23 1 1 26.00 26 26 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAAA............................................................................................................. 26 3 1 25.00 25 25 0 0
.............................................................AAAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 24 1 1 24.00 24 24 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAAT............................................................................................................... 24 2 1 24.00 24 24 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTCA................................................................................................................ 23 2 1 24.00 24 24 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAG................................................................................................................ 23 2 1 24.00 24 24 0 0
...............................................................AGCGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 23.00 23 23 0 0
...............................................................AGAGGTAGTAGGTCGCATAGTTT................................................................................................................ 23 1 1 22.00 22 22 0 0
...............................................................AGAGGTAGTAGGTTGCATCGT.................................................................................................................. 21 1 1 21.00 21 21 0 0
...............................................................AGAGGGAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 21.00 21 21 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTCT................................................................................................................ 23 1 1 19.00 19 19 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTG................................................................................................................. 22 1 1 19.00 19 19 0 0
...............................................................AGAGGTAGTAGGTTGCATAGAA................................................................................................................. 22 2 2 18.50 37 34 3 0
...............................................................AGAGGTAGTAGGTTCCATAGTT................................................................................................................. 22 1 1 18.00 18 17 1 0
...............................................................AGAGGTAGTAGGTTGCATAGTGA................................................................................................................ 23 2 1 17.00 17 17 0 0
...............................................................AGAGGTAGAAGGTTGCATAGTTA................................................................................................................ 23 2 1 17.00 17 17 0 0
...............................................................AGCGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 16.00 16 16 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTAT.............................................................................................................. 25 2 1 16.00 16 16 0 0
...............................................................AGAGGTAGTAGGTTACATAGTTT................................................................................................................ 23 1 1 16.00 16 16 0 0
...............................................................AGAGGGAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 16.00 16 15 0 1
.....................................................................................................................CTATACGACCTGCTGCCTTTCTTT......................................................... 24 1 1 15.00 15 15 0 0
.................................................................AGGTAGTAGGTTGCATAGTTT................................................................................................................ 21 0 1 15.00 15 15 0 0
................................................................GAGGTAGTAGGTTGCATAGTTAA............................................................................................................... 23 2 2 15.00 30 30 0 0
...............................................................AGAGGTAGCAGGTTGCATAGTTA................................................................................................................ 23 2 1 15.00 15 15 0 0
...............................................................AGAGGTAATAGGTTGCATAGTT................................................................................................................. 22 1 1 14.00 14 13 0 1
...............................................................AGAGGTAGTAGGTTGCATAT................................................................................................................... 20 1 1 14.00 14 14 0 0
..................................................................GGTAGTAGGTTGCATAGTT................................................................................................................. 19 0 1 14.00 14 14 0 0
...............................................................CGAGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 14.00 14 14 0 0
...............................................................AGTGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 14.00 14 14 0 0
...............................................................AGAGGTAGTAGCTTGCATAGTTA................................................................................................................ 23 2 1 13.00 13 13 0 0
...............................................................AGAGGTAGTAGGTAGCATAGTTT................................................................................................................ 23 1 1 13.00 13 13 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCC........................................................... 22 1 1 13.00 13 13 0 0
...............................................................AGAGGCAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 13.00 13 13 0 0
...............................................................AGGGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 13.00 13 13 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAAA............................................................................................................... 24 3 3 13.00 39 39 0 0
...............................................................AGAGGTAGTAGGTAGCATAGT.................................................................................................................. 21 1 1 13.00 13 13 0 0
...............................................................AGAAGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 13.00 13 13 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGT.................................................................................................................. 21 1 1 13.00 13 13 0 0
...............................................................AGAGGTAGTAGGTTGTATAGTT................................................................................................................. 22 1 3 12.67 38 38 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAG.............................................................................................................. 25 3 2 12.50 25 25 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTT............................................................ 21 1 1 12.00 12 11 1 0
...............................................................AGAGGTAGTAGGTCGCATAGT.................................................................................................................. 21 1 1 12.00 12 12 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTACA.............................................................................................................. 25 2 1 12.00 12 12 0 0
...............................................................AGAGGTAGTAGGTTCCATAGTTT................................................................................................................ 23 1 1 12.00 12 11 1 0
...............................................................AGAGGTAGTACGTTGCATAGTTA................................................................................................................ 23 2 1 12.00 12 12 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAC............................................................................................................... 24 2 1 11.00 11 11 0 0
...............................................................AGAGGTAGTAGTTTGCATAGTT................................................................................................................. 22 1 1 11.00 11 11 0 0
...............................................................AGAGGTAGAAGGTTGCATAGTTT................................................................................................................ 23 1 1 11.00 11 11 0 0
...............................................................AGCGGTAGTAGGTTGCATAGT.................................................................................................................. 21 1 1 11.00 11 10 1 0
...............................................................AGAGGTAGGAGGTTGCATAGTTT................................................................................................................ 23 1 1 11.00 11 11 0 0
...............................................................AGAGGTAGTAGGTTGCGTAGTT................................................................................................................. 22 1 1 11.00 11 11 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTAAA............................................................................................................. 26 2 1 11.00 11 11 0 0
...............................................................AGACGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 11.00 11 11 0 0
...............................................................TGAGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 3 10.67 32 31 0 1
...............................................................AGAGGTAGTAGGTTTCATAGTTA................................................................................................................ 23 2 1 10.00 10 10 0 0
...............................................................AGAGGTAGTAGGTTACATAGTTA................................................................................................................ 23 2 1 10.00 10 10 0 0
.................................................................AGGTAGTAGGTTGCATAGTTA................................................................................................................ 21 1 1 10.00 10 10 0 0
....................................................................................................................ACTATACGACCTGCTGCCTTTCT........................................................... 23 0 1 10.00 10 10 0 0
...............................................................AGAGGTAGTCGGTTGCATAGTT................................................................................................................. 22 1 1 10.00 10 10 0 0
...............................................................AGAGGTAGTAGGTTGCTTAGTT................................................................................................................. 22 1 1 10.00 10 10 0 0
...............................................................CGAGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 10.00 10 10 0 0
................................................................GAGGTAGTAGGTTGCATAGTTAT............................................................................................................... 23 1 1 10.00 10 10 0 0
...............................................................AGAGGTAGTAGGTTGCATT.................................................................................................................... 19 1 1 10.00 10 9 1 0
....................................................................................................................ACTATACGACCTGCTGCCTTTC............................................................ 22 0 1 10.00 10 9 1 0
................................................................GAGGTAGTAGGTTGCATAGTTAAA.............................................................................................................. 24 2 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCCTAG................................................................................................................... 20 1 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTCCATAGTTA................................................................................................................ 23 2 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTC................................................................................................................. 22 2 1 9.00 9 9 0 0
...............................................................AGAGGTAGGAGGTTGCATAGTTA................................................................................................................ 23 2 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATGGTT................................................................................................................. 22 1 1 9.00 9 9 0 0
................................................................GAGGTAGTAGGTTGCATAGTA................................................................................................................. 21 1 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAAAA.............................................................................................................. 25 3 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAAT............................................................................................................. 26 3 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTGT................................................................................................................ 23 1 1 9.00 9 9 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCAA.......................................................... 23 2 1 9.00 9 9 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTAA............................................................................................................... 24 3 1 8.00 8 8 0 0
...............................................................AGAGGTAGTACGTTGCATAGTTT................................................................................................................ 23 1 1 8.00 8 8 0 0
...............................................................TGAGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 3 8.00 24 24 0 0
...............................................................AGAGGTAGTAGGTTGAATAGTT................................................................................................................. 22 1 1 8.00 8 8 0 0
..............................................................AAGAGGTAGTAGGTTGCATAG................................................................................................................... 21 0 1 8.00 8 8 0 0
...............................................................AGAGGTAGTAGCTTGCATAGTTT................................................................................................................ 23 1 1 8.00 8 8 0 0
...............................................................AGTGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 8.00 8 8 0 0
...............................................................AGAGGTAGTAGGTTGCATAGCT................................................................................................................. 22 1 1 8.00 8 8 0 0
...............................................................AGAGGTAGTAGGTTGC....................................................................................................................... 16 0 1 8.00 8 1 7 0
...............................................................AGAGGTAGTAGATTGCATAGTTT................................................................................................................ 23 1 1 8.00 8 7 0 1
...............................................................AGAGGTAGTAGGCTGCATAGTTA................................................................................................................ 23 2 1 8.00 8 8 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTTTT.......................................................... 23 1 1 8.00 8 8 0 0
.................................................................AGGTAGTAGGTTGCATAGT.................................................................................................................. 19 0 1 8.00 8 6 2 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTTT............................................................................................................. 26 2 1 8.00 8 8 0 0
...............................................................AGAGGGAGTAGGTTGCATAGT.................................................................................................................. 21 1 1 8.00 8 7 1 0
...............................................................AGAGGAAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 8.00 8 8 0 0
...............................................................GGAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 8.00 8 7 1 0
.....................................................................................................................CTATACGACCTGCTGCCTTTA............................................................ 21 1 1 8.00 8 8 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTAT............................................................................................................... 24 2 1 7.00 7 7 0 0
...............................................................AGAGGTAGTAGCTTGCATAGTTC................................................................................................................ 23 2 1 7.00 7 7 0 0
...............................................................AGAGGTAGTAGCTTGCATAGT.................................................................................................................. 21 1 1 7.00 7 7 0 0
..............................................................AAGAGGTAGTAGGTTGCATAGTTG................................................................................................................ 24 1 1 7.00 7 7 0 0
...............................................................AGAGGTAGAAGGTTGCATAGT.................................................................................................................. 21 1 1 7.00 7 7 0 0
...............................................................AGGGGTAGTAGGTTGCATAGT.................................................................................................................. 21 1 1 7.00 7 7 0 0
................................................................GAGGTAGTAGGTTGCATAGTAA................................................................................................................ 22 2 1 7.00 7 7 0 0
...............................................................AGAGGTAGTAGGTTGCATCG................................................................................................................... 20 1 1 7.00 7 7 0 0
...............................................................AGAGGTGGTAGGTTGCATAGTT................................................................................................................. 22 1 1 7.00 7 7 0 0
...............................................................AGGGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 7.00 7 7 0 0
...............................................................AGAGGTCGTAGGTTGCATAGTT................................................................................................................. 22 1 1 7.00 7 7 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTC............................................................................................................... 24 1 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGGT................................................................................................................. 22 2 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGTGGCATAGTTT................................................................................................................ 23 1 1 6.00 6 6 0 0
...........................................................AAAAAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 26 2 1 6.00 6 6 0 0
......................................................................................................................TATACGACCTGCTGCCTTTC............................................................ 20 0 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAAGTTGCATAGTTA................................................................................................................ 23 2 1 6.00 6 6 0 0
..............................................................AAGAGGTAGTAGGTTGCATAGTTAA............................................................................................................... 25 2 1 6.00 6 6 0 0
...............................................................AGAGCTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 6.00 6 5 1 0
...............................................................AGAGGTAGTACGTTGCATAGT.................................................................................................................. 21 1 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGTTGCATTGTT................................................................................................................. 22 1 1 6.00 6 6 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTTA......................................................... 24 0 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGGTGCATAGTT................................................................................................................. 22 1 1 6.00 6 6 0 0
...............................................................AGAGGTAGTGGGTTGCATAGTT................................................................................................................. 22 1 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAC................................................................................................................ 23 2 1 6.00 6 6 0 0
.............................................................AAAGAGGTAGTAGGTTGCATAGT.................................................................................................................. 23 1 1 6.00 6 6 0 0
...............................................................AGAGGTAGCAGGTTGCATAGTTT................................................................................................................ 23 1 1 6.00 6 6 0 0
...............................................................................................................AGTTAACTATACGACCTGCTGCCT............................................................... 24 0 1 6.00 6 6 0 0
...............................................................AGACGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 6.00 6 6 0 0
...............................................................AGAAGTAGTAGGTTGCCTAGTT................................................................................................................. 22 2 1 6.00 6 6 0 0
...............................................................AGAGGTAGTAGGTTGCATAGAT................................................................................................................. 22 1 1 6.00 6 6 0 0
................................................................GAGGTAGTAGGTTGCATAGTTG................................................................................................................ 22 1 1 6.00 6 6 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTAT........................................................... 22 1 1 6.00 6 6 0 0
...............................................................AGTGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 6.00 6 6 0 0
...............................................................AGAGGGAGTAGGTTGCATAGTTAA............................................................................................................... 24 3 1 6.00 6 6 0 0
......................................................................................................................TATACGACCTGCTGCCTTTTT........................................................... 21 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTTAT............................................................................................................... 24 2 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTAG............................................................................................................. 26 0 1 5.00 5 5 0 0
...............................................................AGAGGCAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 5.00 5 5 0 0
...............................................................AGAGGTCGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTCGCATAGTTAT............................................................................................................... 24 2 1 5.00 5 5 0 0
.....................................................................................................................CTATACGACCTGCTGCTTTTCT........................................................... 22 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGTTTGCATAGTTT................................................................................................................ 23 1 1 5.00 5 5 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTAAA........................................................ 25 2 1 5.00 5 5 0 0
...........................................................GTCAAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 26 3 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAC.............................................................................................................. 25 3 1 5.00 5 5 0 0
...............................................................AGAGGTATTAGGTTGCATAGTT................................................................................................................. 22 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTATT.............................................................................................................. 25 2 1 5.00 5 5 0 0
............................................................AAAAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 25 2 1 5.00 5 5 0 0
...............................................................CGAGGTAGTAGGTTGCATAGT.................................................................................................................. 21 1 1 5.00 5 5 0 0
...............................................................AGAGGAAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 5.00 5 5 0 0
.....................................................................................................................ATATACGACCTGCTGCCTTTCT........................................................... 22 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTA................................................................................................................. 22 2 1 5.00 5 5 0 0
...................................................................GTAGTAGGTTGCATAGTT................................................................................................................. 18 0 1 5.00 5 4 1 0
...............................................................AGCGGTAGTAGGTAGCATAGTT................................................................................................................. 22 2 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTAT................................................................................................................ 23 2 1 5.00 5 5 0 0
...............................................................AGAGGTAGGAGGTTGCATAG................................................................................................................... 20 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTATA.............................................................................................................. 25 1 1 5.00 5 5 0 0
...............................................................AGAGGTAGTATGTTGCATAGTT................................................................................................................. 22 1 1 5.00 5 5 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTAG......................................................... 24 2 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTAGG............................................................................................................ 27 0 1 5.00 5 5 0 0
...............................................................AGAAGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 5.00 5 5 0 0
.....................................................................................................................CTATACGACCTGCTGCCTT.............................................................. 19 0 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTA.............................................................................................................. 25 0 1 5.00 5 5 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTTAT............................................................................................................. 26 1 1 5.00 5 5 0 0
.....................................................................................................................CTATACGACCTGCCGCCTTTCT........................................................... 22 1 1 4.00 4 4 0 0
.......................................................................................................................ATACGACCTGCTGCCTTTCT........................................................... 20 0 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGATTGCATAGT.................................................................................................................. 21 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCAAA.................................................................................................................... 19 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTATT............................................................................................................... 24 1 1 4.00 4 4 0 0
....................................................................TAGTAGGTTGCATAGTTAGAGG............................................................................................................ 22 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAAAG............................................................................................................. 26 2 1 4.00 4 4 0 0
.............................................................AAAGAGGTAGTAGGTTGCATAGTTA................................................................................................................ 25 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCACAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTGGCATAGTTA................................................................................................................ 23 2 1 4.00 4 4 0 0
..............................................................AAGAGGTAGTAGGTTGCATAA................................................................................................................... 21 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCA...................................................................................................................... 17 0 1 4.00 4 3 1 0
...............................................................ACAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AAAGGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGGAGGTTGCATAGT.................................................................................................................. 21 1 1 4.00 4 4 0 0
...............................................................AGAGTTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGCAGGTTGCATAGT.................................................................................................................. 21 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATATTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTGAA.............................................................................................................. 25 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGATGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTG................................................................................................................. 22 2 1 4.00 4 4 0 0
......................................................................................................................TATACGACCTGCTGCCTTTCTAT......................................................... 23 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAAGTTGCATAGTTT................................................................................................................ 23 1 1 4.00 4 4 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCCA.......................................................... 23 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGCTGCATAGTTT................................................................................................................ 23 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGCTGCATAGT.................................................................................................................. 21 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATACTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTGGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTCAT............................................................................................................... 24 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTAGCATAGTTAT............................................................................................................... 24 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGGTGCATAGTTA................................................................................................................ 23 2 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCAAAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAAG............................................................................................................... 24 3 1 4.00 4 4 0 0
...............................................................AGAGTTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 4.00 4 4 0 0
...............................................................AGATGTAGTAGGTTGCATAGTT................................................................................................................. 22 1 1 4.00 4 4 0 0
...............................................................ACAGGTAGTAGGTTGCATAGTTA................................................................................................................ 23 2 1 4.00 4 4 0 0
...............................................................AGAGGGAGTAGGTTGCATAG................................................................................................................... 20 1 2 3.50 7 7 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTTAA............................................................................................................... 24 3 2 3.50 7 7 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTTAG.............................................................................................................. 25 2 2 3.50 7 7 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTAGA............................................................................................................... 24 3 3 3.33 10 10 0 0
................................................................GAGGCAGTAGGTTGCATAGTT................................................................................................................. 21 1 1 3.00 3 3 0 0
......................................................................................................................TATACGACCTGCTGCCTTT............................................................. 19 0 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGATTGCATAGTCT................................................................................................................ 23 2 1 3.00 3 3 0 0
...............................................................AGAGGTGGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 3.00 3 3 0 0
................................................................GAGGTAGTAGGATGCATAGTT................................................................................................................. 21 1 1 3.00 3 3 0 0
...............................................................AGAGGTAATAGGTTGCATAGTTA................................................................................................................ 23 2 1 3.00 3 3 0 0
...............................................................AGAGGAAGTAGGTTGCATAGT.................................................................................................................. 21 1 1 3.00 3 2 1 0
...............................................................AGAGGTAGTAGGTTGCATCGTTTA............................................................................................................... 24 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTTGCATAGCTA................................................................................................................ 23 2 1 3.00 3 3 0 0
..............................................................TAGAGGTAGTAGGTTGCATAGTT................................................................................................................. 23 1 1 3.00 3 3 0 0
.......................................................................................................................ATACGACCTGCTGCCTTTCTCT......................................................... 22 2 1 3.00 3 3 0 0
...............................................................AGAGGGAGTAGGTTGCATAGTTAT............................................................................................................... 24 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTAGCATAGTA................................................................................................................. 22 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTTGCATACTTA................................................................................................................ 23 2 1 3.00 3 3 0 0
......................................................................................................................TATACGACCTGCTGCCTTTCTTT......................................................... 23 1 1 3.00 3 3 0 0
................................................................GAGGTAGTAGGTTGCATAGTTTT............................................................................................................... 23 0 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTG................................................................................................................ 23 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGATTGCATAG................................................................................................................... 20 1 1 3.00 3 3 0 0
.............................................................TAAGAGGTAGTAGGTTGCATAGT.................................................................................................................. 23 1 1 3.00 3 3 0 0
.................................................................................................................AAAACTATACGACCTGCTGCCTTTCT........................................................... 26 2 1 3.00 3 3 0 0
.....................................................................................................................CTATACGACCTGCTGCCTTTCTTTT........................................................ 25 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTGGCATCGTT................................................................................................................. 22 2 1 3.00 3 3 0 0
......................................................................................................................TATACGACCTGCTGCCTTTCTA.......................................................... 22 1 1 3.00 3 3 0 0
...............................................................................................................AGTTAACTATACGACCTGCTGCCTTT............................................................. 26 0 1 3.00 3 3 0 0
...............................................................AGAGGTAGTCGGTTGCATAGTTA................................................................................................................ 23 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTTGCATCGTTTT............................................................................................................... 24 1 1 3.00 3 3 0 0
...............................................................ATAGGTAGTAGGTTGCATAGTTT................................................................................................................ 23 1 1 3.00 3 3 0 0
......................................................................................................................TATACGACCTGCTGCCTTTCC........................................................... 21 1 1 3.00 3 3 0 0
...............................................................AGAGGTAGAAGGTTGCATAGTA................................................................................................................. 22 2 1 3.00 3 3 0 0
...............................................................AGAGGTAGTAGGTTGCCTAGTC................................................................................................................. 22 2 2 3.00 6 6 0 0
...............................................................AGAGGTAGTAGGTTGCATAGTTAGAGA............................................................................................................ 27 3 1 3.00 3 3 0 0

Anti-sense strand reads

TTGTCCATACACTTCACGCAGGCGGTTCATCTTCTGGTCGTTCTTATGTCACCCGAGGATCCTTCTCCATCATCCAACGTATCAAAATCCCGTCTCTAAAACGGGTGTTCCTCAATTGATATGCTGGACGACGGAAAGAATCCCGGAATAGTATGGTCGTATGTCAAGGTACGCACATTCGTTCTCAAGAAGCACGTC
********************************************...((((.(((((((.((((((((((((((.((((((...(((((((...)))))))..........)))))).))))))))))))))))))))))))).......************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:37 PM