ID:

rno-let-7c-1

 Coordinate:

chr11:16052873-16052966 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.3 -45.3 -45.3
mature
  1. chr11:16052888-16052909 +
  2. chr7:126590225-126590246 +
star

Sense Strand Reads

TTTGGAGGAGCGGACTGAAGATATAATGAGTTTGAAGAAACACTGGAAGCTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCATCGAGGAATTCTTCATCTCTTTAATCTGACCAAGCCAACCTCT
***********************************.......((.((.(((((((((.((((((..(((.(((.(((((((((((((..((.((.((...)).)).))))))))))))))).))).)))..))))))))))))...)))..)).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
.................................................................TGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 0 2 29127.00 58254 56330 1430 494
.................................................................TGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 1 2 9491.50 18983 18652 305 26
.................................................................TGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 24 2 2 8720.00 17440 17341 88 11
.................................................................TGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 0 2 7342.50 14685 14352 279 54
.................................................................TGAGGTAGTAGGTTGTATGGTTAA......................................................................................................... 24 1 1 4573.00 4573 4534 34 5
.................................................................TGAGGTAGTAGGTTGTATGGT............................................................................................................ 21 0 2 2477.50 4955 4562 180 213
.................................................................TGAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 24 1 2 1705.00 3410 3373 36 1
..................................................................GAGGTAGTAGGTTGTATGGTT........................................................................................................... 21 0 2 1101.50 2203 2178 6 19
.................................................................TGAGGTAGTAGGTTGTATGGTAA.......................................................................................................... 23 2 2 1048.50 2097 2064 18 15
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 25 2 2 913.00 1826 1783 42 1
.................................................................TGAGGTAGTAGGTTGTATGGTTAAA........................................................................................................ 25 2 1 792.00 792 789 3 0
.................................................................TGAGGTAGTAGGTTGTATGGTA........................................................................................................... 22 1 2 780.00 1560 1525 18 17
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAT........................................................................................................ 25 3 2 777.50 1555 1541 13 1
.................................................................TGAGGTAGTAGGTTGTATGG............................................................................................................. 20 0 2 746.00 1492 1290 7 195
.................................................................TGAGGTAGTAGGTTGTATGGTTTA......................................................................................................... 24 0 1 572.00 572 559 13 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAG........................................................................................................ 25 2 1 396.00 396 396 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAAA......................................................................................................... 24 3 3 376.00 1128 1125 0 3
.................................................................TGAGGTAGTAGGTTGTATGGTTG.......................................................................................................... 23 1 2 357.00 714 683 27 4
.................................................................TGAGGTAGTAGGTTGTATGGTAT.......................................................................................................... 23 1 2 352.50 705 696 6 3
..................................................................GAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 22 1 2 351.00 702 701 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTGA......................................................................................................... 24 2 2 330.50 661 653 8 0
................................................................ATGAGGTAGTAGGTTGTATGGTT........................................................................................................... 23 1 3 279.67 839 768 41 30
..................................................................GAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 22 0 2 276.50 553 552 0 1
..................................................................GAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 23 2 2 263.50 527 526 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTTAG......................................................................................................... 24 2 2 260.00 520 511 7 2
.................................................................TGAGGTAGTAGGTTGTATGGTTTAA........................................................................................................ 25 1 1 223.00 223 215 8 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAAA....................................................................................................... 26 3 2 222.00 444 444 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTAAA......................................................................................................... 24 2 1 204.00 204 203 0 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAAA....................................................................................................... 26 2 2 196.50 393 389 4 0
..................................................................GAGGTAGTAGGTTGTATGGTTAA......................................................................................................... 23 1 1 173.00 173 173 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTGA......................................................................................................... 24 1 1 172.00 172 172 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAT........................................................................................................ 25 2 1 172.00 172 172 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAG........................................................................................................ 25 1 1 167.00 167 167 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAG........................................................................................................ 25 1 1 148.00 148 148 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTAT........................................................................................................ 25 1 1 147.00 147 147 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAGA....................................................................................................... 26 2 1 135.00 135 134 0 1
.................................................................TGAGGTAGTAGGTTGTATGGA............................................................................................................ 21 1 2 123.50 247 183 1 63
................................................................ATGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 25 3 2 108.00 216 206 7 3
.................................................................TGAGGTAGTAGGTTGTATGGTTAAAA....................................................................................................... 26 2 1 98.00 98 98 0 0
..................................................................GAGGTAGTAGGTTGTATGGT............................................................................................................ 20 0 2 97.00 194 181 0 13
.................................................................TGAGGTAGTAGGTTGTAT............................................................................................................... 18 0 4 82.50 330 295 2 33
.................................................................TGAGGGAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 82.00 164 155 8 1
.................................................................TGAGGTAGTAGGTTGTATGGTAG.......................................................................................................... 23 2 2 78.50 157 155 2 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAGA......................................................................................................... 24 3 2 76.50 153 151 0 2
.................................................................TGAGGTAGTAGGTTGTCTGGTT........................................................................................................... 22 1 3 74.67 224 218 6 0
................................................................ATGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 24 2 3 74.33 223 222 1 0
.................................................................TGAGGTAGTAGGTTGTATGGAA........................................................................................................... 22 2 2 73.50 147 131 2 14
................................................................TTGAGGTAGTAGGTTGTATGGT............................................................................................................ 22 0 1 70.00 70 58 12 0
................................................................TTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 23 0 1 70.00 70 68 1 1
.................................................................TGAGGTAGTAGGTTGTATGGTC........................................................................................................... 22 1 2 69.50 139 127 11 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAGA....................................................................................................... 26 1 1 66.00 66 66 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAGT....................................................................................................... 26 3 1 65.00 65 64 1 0
.................................................................TGCGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 60.50 121 118 1 2
..................................................................GAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 23 1 2 57.00 114 114 0 0
.................................................................TGAGGTAGTAGGTCGTATGGTT........................................................................................................... 22 1 2 56.00 112 106 5 1
................................................................ATGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 24 1 3 56.00 168 163 1 4
.................................................................TGAGGTAGTAGGTAGTATGGTT........................................................................................................... 22 1 2 54.50 109 95 14 0
.................................................................TGAGGCAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 51.50 103 98 3 2
.................................................................TGAGGTAGAAGGTTGTATGGTT........................................................................................................... 22 1 2 51.00 102 97 4 1
.................................................................TGAGGTAGTAGGTTGTATGGTTTAG........................................................................................................ 25 0 1 50.00 50 39 11 0
.................................................................TGAGGTAGTAGGTTGTATGGTG........................................................................................................... 22 1 2 47.50 95 95 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAGA....................................................................................................... 26 1 1 47.00 47 41 6 0
.................................................................TGAGGTAGTAGGTTGTATCGTT........................................................................................................... 22 1 4 46.50 186 183 2 1
.................................................................TGAGGTAGTAGGTTGTATGGTTC.......................................................................................................... 23 1 2 45.00 90 88 1 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAGT....................................................................................................... 26 2 1 42.00 42 42 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTAAA....................................................................................................... 26 1 1 42.00 42 42 0 0
................................................................ATGAGGTAGTAGGTTGTATGGTTAA......................................................................................................... 25 2 1 42.00 42 42 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTATA......................................................................................................... 24 2 2 41.00 82 82 0 0
.................................................................TGGGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 41.00 82 76 4 2
.................................................................TGAGGTAGCAGGTTGTATGGTT........................................................................................................... 22 1 2 40.00 80 74 6 0
...............................................................GTTGAGGTAGTAGGTTGTATGGT............................................................................................................ 23 0 1 40.00 40 39 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTTAAAT....................................................................................................... 26 3 1 39.00 39 38 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTGAA........................................................................................................ 25 2 1 38.00 38 38 0 0
..................................................................GAGGTAGTAGGTTGTATGGTA........................................................................................................... 21 1 2 37.50 75 75 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 24 2 2 37.00 74 74 0 0
.................................................................TGAGGTAGTAGGTTGTCTGGTTA.......................................................................................................... 23 2 3 36.67 110 107 3 0
.................................................................TGAGGTAGTAGGTTGTCTGGTTAA......................................................................................................... 24 2 1 36.00 36 36 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAC........................................................................................................ 25 2 1 35.00 35 28 7 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTATT....................................................................................................... 26 3 2 33.00 66 65 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTTAGA........................................................................................................ 25 3 4 32.50 130 129 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTGA.......................................................................................................... 23 2 2 32.00 64 62 1 1
.................................................................TGAGGTAGTAGGTTGTATG.............................................................................................................. 19 0 2 31.50 63 57 0 6
..................................................................GAGGTAGTAGGTTGTATGGTTAAA........................................................................................................ 24 2 1 31.00 31 31 0 0
.................................................................TGAGGTAGGAGGTTGTATGGTT........................................................................................................... 22 1 3 30.67 92 89 3 0
.................................................................TGAGGTAGTAGGTTGTCTGGTTT.......................................................................................................... 23 1 3 30.33 91 89 2 0
.................................................................TGAGGAAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 30.00 60 54 4 2
.................................................................CGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 29.00 58 54 3 1
.................................................................TGAGGTAGTAGGTTGTGTGGTTTATAT...................................................................................................... 27 3 1 29.00 29 28 1 0
...............................................................AATGAGGTAGTAGGTTGTATGGTT........................................................................................................... 24 2 3 28.67 86 74 12 0
.................................................................TGAGGTAGTAGGTTGTATGGTCA.......................................................................................................... 23 2 2 28.50 57 55 1 1
..................................................................GAGGTAGTAGGTTGTATGGTAA.......................................................................................................... 22 2 3 27.67 83 83 0 0
..................................................................GAGGTAGTAGGTTGTATGG............................................................................................................. 19 0 2 25.00 50 44 0 6
.................................................................TGAGGTAGTAGGTTGTGTGGTTCA......................................................................................................... 24 2 2 24.50 49 49 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTCG......................................................................................................... 24 2 2 24.00 48 3 45 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTGAT........................................................................................................ 25 3 2 23.00 46 46 0 0
.................................................................TGAGGTAGTAGGTTGTATGGAAA.......................................................................................................... 23 3 3 23.00 69 69 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAC......................................................................................................... 24 2 3 21.00 63 63 0 0
................................................................TTGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 24 0 1 21.00 21 21 0 0
.................................................................TGAGGGAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 20.50 41 38 3 0
.................................................................TGAGGTAGTACGTTGTATGGTT........................................................................................................... 22 1 2 20.00 40 38 2 0
.................................................................TGTGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 20.00 40 38 1 1
.................................................................TGAGGTAGTAGGTTGTATGGTAGA......................................................................................................... 24 2 1 20.00 20 20 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTATA....................................................................................................... 26 2 1 20.00 20 12 8 0
.................................................................TGAGGGAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 20.00 40 38 2 0
................................................................ATGAGGTAGTAGGTTGTATGGT............................................................................................................ 22 1 3 20.00 60 52 0 8
...............................................................GTTGAGGTAGTAGGTTGTATGGTT........................................................................................................... 24 0 1 20.00 20 20 0 0
.................................................................TGAGGTAGTAGGTTGCATGGTT........................................................................................................... 22 1 2 19.50 39 39 0 0
.................................................................TGAGGTAGTAGTTTGTATGGTT........................................................................................................... 22 1 2 19.50 39 19 20 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAAC........................................................................................................ 25 3 2 19.50 39 39 0 0
.................................................................TGAGGTAGTAGCTTGTATGGTT........................................................................................................... 22 1 2 19.50 39 39 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTGT.......................................................................................................... 23 1 2 19.00 38 38 0 0
.................................................................TGAGGTAGAAGGTTGTATGGTTA.......................................................................................................... 23 2 2 19.00 38 37 1 0
..................................................................GAGGTAGTAGGTTGTGTGGTTGA......................................................................................................... 23 2 2 18.50 37 37 0 0
.................................................................TGAGGTAGTAGGTTATATGGTT........................................................................................................... 22 1 2 18.50 37 35 1 1
.................................................................TGAGGTAGTAGGTTGTATGGTAAAA........................................................................................................ 25 3 1 18.00 18 18 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAATA....................................................................................................... 26 3 1 18.00 18 18 0 0
..................................................................GAGGTAGTAGGTTGTATGGTAT.......................................................................................................... 22 1 2 18.00 36 36 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAGAA....................................................................................................... 26 3 1 18.00 18 18 0 0
.................................................................TGAGGTAGTAGGTAGTATGGTTA.......................................................................................................... 23 2 2 18.00 36 34 2 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAAAT...................................................................................................... 27 3 2 17.50 35 35 0 0
................................................................ATGAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 26 3 2 17.50 35 35 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAGT........................................................................................................ 25 3 2 17.50 35 35 0 0
.................................................................TGAGGCAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 17.50 35 34 1 0
.................................................................TGAGGTAGTAGGTCGTATGGTTA.......................................................................................................... 23 2 2 17.50 35 35 0 0
.................................................................TGAGGTAGTAGATTGTATGGTT........................................................................................................... 22 1 4 17.25 69 64 5 0
.................................................................GGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 17.00 34 32 2 0
.................................................................TGAGGTAGTAGGTTCTATGGTT........................................................................................................... 22 1 2 17.00 34 32 1 1
................................................................ATGAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 25 2 2 16.50 33 33 0 0
.................................................................TGAGGTAGTAGGTAGTGTGGTTAA......................................................................................................... 24 3 2 16.50 33 32 1 0
.................................................................AGAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 16.50 33 33 0 0
.................................................................TGAGGTAGTAGGTAGTATGGTTT.......................................................................................................... 23 1 2 16.50 33 32 1 0
..................................................................GAGGTAGTAGGTTGTGTGGTTAAT........................................................................................................ 24 3 3 16.33 49 49 0 0
.................................................................TGAGGTAGTAGGTTGTATGGAT........................................................................................................... 22 1 2 16.00 32 31 0 1
.................................................................TGAGGTCGTAGGTTGTATGGTT........................................................................................................... 22 1 2 16.00 32 30 1 1
.................................................................TGCGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 16.00 32 31 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTCAA......................................................................................................... 24 3 3 16.00 48 48 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTGAAA....................................................................................................... 26 3 2 15.50 31 31 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTTTA....................................................................................................... 26 3 3 15.00 45 45 0 0
.................................................................TGACGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 15.00 30 29 0 1
.................................................................TGAGGGAGTAGGTTGTATGGTTAA......................................................................................................... 24 2 1 15.00 15 15 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTATAT........................................................................................................ 25 3 2 15.00 30 21 9 0
..................................................................GAGGTAGTAGGTTGTATGGTTTA......................................................................................................... 23 0 1 15.00 15 15 0 0
...................................................................AGGTAGTAGGTTGTATGGTT........................................................................................................... 20 0 2 15.00 30 30 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTTAAG........................................................................................................ 24 2 1 15.00 15 15 0 0
.................................................................TGAGGCAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 14.50 29 28 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAAAA...................................................................................................... 27 3 2 14.50 29 29 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTCT.......................................................................................................... 23 1 2 14.50 29 26 3 0
.................................................................TGAGGTAGTCGGTTGTATGGTT........................................................................................................... 22 1 2 14.00 28 27 1 0
..................................................................GAGGTAGTAGGTTGTATGGTTAG......................................................................................................... 23 2 2 14.00 28 28 0 0
.................................................................TGCGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 14.00 28 27 1 0
................................................................TTGAGGTAGTAGGTTGTGTGGT............................................................................................................ 22 1 2 14.00 28 28 0 0
.................................................................TGAGGTAGCAGGTTGTATGGTTA.......................................................................................................... 23 2 2 14.00 28 26 2 0
.................................................................TGAGGAAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 13.50 27 27 0 0
.................................................................TGAGGTAGGAGGTTGTATGGTTT.......................................................................................................... 23 1 2 13.50 27 27 0 0
.................................................................TGAGGTAGTAGGTTGTATGGCG........................................................................................................... 22 2 2 13.50 27 0 27 0
.................................................................TGAGGTAGTAGGTCGTATGGTTT.......................................................................................................... 23 1 2 13.50 27 25 2 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTAAT....................................................................................................... 26 2 1 13.00 13 13 0 0
.................................................................TGAGGTAGAAGGTTGTATGGTTAA......................................................................................................... 24 2 1 13.00 13 13 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTG......................................................................................................... 24 1 2 13.00 26 26 0 0
.................................................................TGAGGTAGTAGGTTGTATCGTTA.......................................................................................................... 23 2 4 13.00 52 52 0 0
.................................................................TGAGGTAGTAGGCTGTATGGTT........................................................................................................... 22 1 2 13.00 26 25 1 0
.................................................................TGAGGTAGTAGGTCGTGTGGTTAA......................................................................................................... 24 3 3 12.67 38 38 0 0
.................................................................TGGGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 12.50 25 24 1 0
.................................................................TGAGGTGGTAGGTTGTATGGTT........................................................................................................... 22 1 2 12.00 24 24 0 0
.................................................................TGAGGTAGAAGGTTGTATGGTTT.......................................................................................................... 23 1 2 12.00 24 23 1 0
.................................................................TGAGGTAGTAGGTTGTTTGGTT........................................................................................................... 22 1 3 12.00 36 29 7 0
.................................................................TGAGGTAGTAGGTGGTATGGTT........................................................................................................... 22 1 2 12.00 24 21 3 0
.................................................................TGAGGTAGTAGGTTGTATCGTTT.......................................................................................................... 23 1 4 11.75 47 45 1 1
................................................................TTGAGGTAGTAGGTTGTATAGT............................................................................................................ 22 1 3 11.67 35 35 0 0
.................................................................TGAGGTAGTAGGTTGTACGGTT........................................................................................................... 22 1 2 11.50 23 23 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAC........................................................................................................ 25 2 2 11.50 23 23 0 0
.................................................................TGAGCTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 11.50 23 21 1 1
.................................................................TGAGGGAGTAGGTTGTGTGGTTAA......................................................................................................... 24 3 4 11.25 45 44 1 0
.................................................................TGAGGTAGTAGGTCGTATGGTTAA......................................................................................................... 24 2 1 11.00 11 11 0 0
.................................................................TGATGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 11.00 22 20 1 1
..................................................................GAGGTAGTAGGTTGTATGGTTAAT........................................................................................................ 24 2 1 11.00 11 11 0 0
.................................................................TGAGGTAGTAGGTTGTATGGCT........................................................................................................... 22 1 2 11.00 22 21 1 0
.................................................................TGAGGTAGTAGCTTGTATGGTTA.......................................................................................................... 23 2 2 10.50 21 21 0 0
.................................................................TGAGGAAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 3 10.33 31 30 1 0
.................................................................TGAGGTAATAGGTTGTATGGTT........................................................................................................... 22 1 2 10.00 20 20 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTAC.......................................................................................................... 23 2 2 10.00 20 20 0 0
.................................................................TGGGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 10.00 20 19 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTCAA......................................................................................................... 24 2 1 10.00 10 10 0 0
.................................................................TGAGGTAGTAGCTTGTATGGTTT.......................................................................................................... 23 1 2 10.00 20 19 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTAGA....................................................................................................... 26 0 1 10.00 10 10 0 0
...............................................................TTTGAGGTAGTAGGTTGTATGG............................................................................................................. 22 1 1 10.00 10 10 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAGT....................................................................................................... 26 2 1 10.00 10 10 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAAAT...................................................................................................... 27 3 1 10.00 10 10 0 0
.................................................................TGAGGTAGTGGGTTGTATGGTT........................................................................................................... 22 1 2 10.00 20 20 0 0
.................................................................TGAGGTAGGAGGTTGTATGGTTA.......................................................................................................... 23 2 3 9.67 29 28 1 0
.................................................................TGAGGTAGTAAGTTGTATGGTT........................................................................................................... 22 1 3 9.67 29 27 1 1
.................................................................TCAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 9.50 19 18 0 1
..................................................................GAGGTAGTAGGTTGTGTGGTTTAAA....................................................................................................... 25 2 2 9.50 19 19 0 0
.................................................................TGAGGTAGTAGGTTGTATGGAAT.......................................................................................................... 23 2 2 9.50 19 19 0 0
.................................................................TGAGGTAGTACGTTGTGTGGTTAA......................................................................................................... 24 3 2 9.50 19 19 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTAAG........................................................................................................ 24 1 1 9.00 9 9 0 0
.................................................................TGAGGTACTAGGTTGTATGGTT........................................................................................................... 22 1 2 9.00 18 16 1 1
....................................................................GGTAGTAGGTTGTATGGTT........................................................................................................... 19 0 2 9.00 18 17 1 0
.................................................................TGAGGTAGTAGGTTGTATGTTT........................................................................................................... 22 1 2 9.00 18 18 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTCA......................................................................................................... 24 1 1 9.00 9 9 0 0
.................................................................TGAGGTAGAAGGTTGTGTGGTTAA......................................................................................................... 24 3 4 8.50 34 31 3 0
.................................................................TGAAGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 8.50 17 15 2 0
.................................................................TGAGGTAGTAGGTTGTATGGTTGAAA....................................................................................................... 26 2 1 8.00 8 8 0 0
.................................................................TGCGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 24 3 2 8.00 16 16 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTAAAT........................................................................................................ 25 3 1 8.00 8 7 1 0
..................................................................GAGGTAGTAGGTTGTATGGTTTAA........................................................................................................ 24 1 1 8.00 8 8 0 0
................................................................ATGAGGTAGTAGGTTGTATGGTA........................................................................................................... 23 2 3 8.00 24 22 0 2
.................................................................TGAGGTAGTAGGTTGTGTGGTTGAGA....................................................................................................... 26 2 1 8.00 8 8 0 0
.................................................................TGAGGTAGTAGGTTGTATGCG............................................................................................................ 21 2 2 8.00 16 0 16 0
.................................................................TGAGGGAGTAGGTTGTATGGT............................................................................................................ 21 1 2 8.00 16 13 3 0
.................................................................TGAGGTAGTAGGTTGTATCGT............................................................................................................ 21 1 4 7.75 31 29 2 0
.................................................................AGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 7.50 15 14 1 0
..................................................................GAGGTAGTAGGTTGTGTGGTTAAAA....................................................................................................... 25 3 2 7.50 15 15 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTG.......................................................................................................... 22 1 2 7.50 15 13 1 1
.................................................................TGAGGTAGCAGGTTGTATGGTTT.......................................................................................................... 23 1 2 7.50 15 14 1 0
.................................................................TGAGGTAGTAGGCTGTATGGTTA.......................................................................................................... 23 2 2 7.50 15 14 1 0
.................................................................TGAGGTAGTAGGTTATGTGGTTAA......................................................................................................... 24 3 2 7.50 15 14 0 1
.................................................................TGAGGTAGTAGGTTGTATGGTTAAAAA...................................................................................................... 27 3 2 7.50 15 15 0 0
.................................................................TGAGGTAGTAGGTTGTATTGTT........................................................................................................... 22 1 5 7.40 37 36 1 0
.................................................................TGAGGTAGTAGGTTGTCTGGT............................................................................................................ 21 1 3 7.33 22 19 2 1
...............................................................AATGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 25 2 3 7.33 22 22 0 0
.................................................................TGAGGTAGTAGATTGTATGGTTA.......................................................................................................... 23 2 4 7.25 29 26 3 0
..............................................................AAATGAGGTAGTAGGTTGTATGGTT........................................................................................................... 25 3 4 7.25 29 23 6 0
.................................................................TGAGGAAGTAGGTTGTATGGTTAA......................................................................................................... 24 2 1 7.00 7 7 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAACA....................................................................................................... 26 2 1 7.00 7 7 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTCG.......................................................................................................... 23 2 2 7.00 14 2 12 0
.................................................................TGAGGTAGTAGGTTATATGGTTA.......................................................................................................... 23 2 2 7.00 14 14 0 0
..................................................................GAGGTAGTAGGTTGTATGGTAAA......................................................................................................... 23 2 1 7.00 7 7 0 0
.................................................................TGAGGCAGTAGGTTGTATGGTTAA......................................................................................................... 24 2 1 7.00 7 7 0 0
.............................................................GGTTTGAGGTAGTAGGTTGTAT............................................................................................................... 22 1 1 7.00 7 7 0 0
.................................................................TGGGGTAGTAGGTTGTATGGTTAA......................................................................................................... 24 2 1 7.00 7 7 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTATAG........................................................................................................ 25 2 1 7.00 7 7 0 0
................................................................TTGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 23 1 2 7.00 14 14 0 0
.....................................................................GTAGTAGGTTGTATGGTT........................................................................................................... 18 0 2 7.00 14 14 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTAAA......................................................................................................... 23 3 6 6.83 41 41 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTAAG......................................................................................................... 24 3 3 6.67 20 20 0 0
..................................................................GAGGTAGTCGGTTGTATGGTT........................................................................................................... 21 1 2 6.50 13 13 0 0
.................................................................CGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 6.50 13 13 0 0
.................................................................TGAGGTAGTAGGTTGCATGGTTT.......................................................................................................... 23 1 2 6.50 13 13 0 0
.................................................................TGAGGTAGTAGGTTGTATGCTT........................................................................................................... 22 1 2 6.50 13 11 2 0
.................................................................TGAGGTAGTACGTTGTATGGTTA.......................................................................................................... 23 2 2 6.50 13 11 2 0
...............................................................AATGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 25 3 4 6.50 26 23 3 0
................................................................ATGAGGTAGTAGGTTGTATGGTAA.......................................................................................................... 24 3 4 6.50 26 26 0 0
.................................................................TGAGGTAGTAGGTTGTATGA............................................................................................................. 20 1 2 6.50 13 8 0 5
................................................................ATGAGGTAGTAGGTTGTATGG............................................................................................................. 21 1 3 6.33 19 12 0 7
...............................................................GTTGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 25 1 1 6.00 6 6 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTTAAGA....................................................................................................... 25 2 1 6.00 6 6 0 0
.................................................................TGAGGTAGTAGGTTGTCTGGTTTA......................................................................................................... 24 1 1 6.00 6 6 0 0
.................................................................CGAGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 6.00 12 11 1 0
.................................................................TGAGGTAGTAGATTGTATGGTTAA......................................................................................................... 24 2 1 6.00 6 6 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTAAAA....................................................................................................... 25 2 1 6.00 6 6 0 0
.................................................................TGCGGTAGTAGGTTGTATGGTTAA......................................................................................................... 24 2 1 6.00 6 6 0 0
.................................................................TGTGGTAGTAGGTTGTATGGTTA.......................................................................................................... 23 2 2 6.00 12 11 0 1
.................................................................TGAGGTAGTATGTTGTATGGTT........................................................................................................... 22 1 2 6.00 12 10 0 2
..................................................................GAGGTAGTAGGTTGTGTGGTTTAG........................................................................................................ 24 1 1 6.00 6 6 0 0
.................................................................TGAGGTAGTAGGCTGTATGGTTT.......................................................................................................... 23 1 2 6.00 12 12 0 0
.................................................................TTAGGTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 6.00 12 11 0 1
..................................................................GAGGGAGTAGGTTGTATGGTT........................................................................................................... 21 1 2 6.00 12 11 1 0
.................................................................TGAGGTTGTAGGTTGTATGGTT........................................................................................................... 22 1 2 6.00 12 11 1 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTAACA....................................................................................................... 26 3 1 6.00 6 6 0 0
.................................................................TGAGGTAGTACGTTGTATGGTTT.......................................................................................................... 23 1 2 6.00 12 12 0 0
.................................................................TGAGGTAGTAGGATGTATGGTT........................................................................................................... 22 1 2 6.00 12 12 0 0
.................................................................TGAGGTAGTAGGTAGTATGGTTAA......................................................................................................... 24 2 1 6.00 6 6 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTGAA......................................................................................................... 24 3 5 5.80 29 28 1 0
.................................................................TGAGGTAGTAGGTTGTATGGTTTC......................................................................................................... 24 1 3 5.67 17 17 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTAAAG........................................................................................................ 25 3 2 5.50 11 11 0 0
...................................................................AGGTAGTAGGTTGTATGGTTT.......................................................................................................... 21 0 2 5.50 11 11 0 0
.................................................................TGAGGTAGTAGGTTATATGGTTT.......................................................................................................... 23 1 2 5.50 11 11 0 0
.................................................................TGAGGCAGTAGGTTGTATGGT............................................................................................................ 21 1 2 5.50 11 7 3 1
.................................................................TGAGGTAGCAGGTTGTGTGGTTTA......................................................................................................... 24 2 2 5.50 11 10 1 0
.................................................................TGAGGTAGTTGGTTGTATGGTT........................................................................................................... 22 1 2 5.50 11 11 0 0
.................................................................TGCGGTAGTAGGTTGTATGGT............................................................................................................ 21 1 2 5.50 11 10 0 1
.................................................................TGAGGTAGTAGGTTGTTTGGTTA.......................................................................................................... 23 2 4 5.50 22 21 0 1
.................................................................TGAGGTAGTAGATTGTGTGGTTAA......................................................................................................... 24 3 3 5.33 16 16 0 0
.................................................................TGAGGTAGTAGGTTGTATGGAG........................................................................................................... 22 2 3 5.33 16 15 0 1
.................................................................TGAGGTAGTAAGTTGTATGGTTA.......................................................................................................... 23 2 3 5.33 16 16 0 0
.................................................................AGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 24 3 3 5.33 16 16 0 0
......................................................................TAGTAGGTTGTATGGTT........................................................................................................... 17 0 2 5.00 10 10 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAATA....................................................................................................... 26 2 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTTGTGCGGTTAA......................................................................................................... 24 3 2 5.00 10 10 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTTAT........................................................................................................ 24 1 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTTGTATGGTTAAGAA...................................................................................................... 27 2 1 5.00 5 5 0 0
.................................................................TGTGGTAGTAGGTTGTATGGTTT.......................................................................................................... 23 1 2 5.00 10 10 0 0
.................................................................TGAGGTAGTAGGTTTTATGGTT........................................................................................................... 22 1 2 5.00 10 8 0 2
.................................................................TGAGGTAGTAGGTTGTGTGGTATAAA....................................................................................................... 26 3 2 5.00 10 10 0 0
................................................................TTGAGGTAGTAGGTTGTATGGTA........................................................................................................... 23 1 1 5.00 5 5 0 0
..................................................................GAGGTAGTAGGTTGTATGGTTCA......................................................................................................... 23 1 1 5.00 5 5 0 0
................................................................TTGAGGTAGTAGGTTGTATGGTTA.......................................................................................................... 24 1 1 5.00 5 5 0 0
................................................................TTGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 24 1 2 5.00 10 10 0 0
.................................................................TGAGGGAGTAGGTTGTATGGTTAAA........................................................................................................ 25 3 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTGGTATGGTTAA......................................................................................................... 24 2 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTTCTATGGTTA.......................................................................................................... 23 2 2 5.00 10 10 0 0
..................................................................GAGGTAGTAGGTTGTGTGGTTTAGA....................................................................................................... 25 1 1 5.00 5 5 0 0
....................................................................GGTAGTAGGTTGTATGGTTAA......................................................................................................... 21 1 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTCTA......................................................................................................... 24 2 2 5.00 10 9 1 0
..............................................................GTTTGAGGTAGTAGGTTGTATG.............................................................................................................. 22 1 1 5.00 5 5 0 0
.................................................................TGAGGTAGTAGGTTGTGTGGTTTAGAT...................................................................................................... 27 2 1 5.00 5 5 0 0
.................................................................TGAGTTAGTAGGTTGTATGGTT........................................................................................................... 22 1 2 5.00 10 10 0 0
.................................................................TGAGGTAGTAGGGTGTATGGTT........................................................................................................... 22 1 2 5.00 10 10 0 0
.................................................................TGAGGTAGGAGGTTGTGTGGTTAA......................................................................................................... 24 3 6 4.83 29 29 0 0
...............................................................AATGAGGTAGTAGGTTGTATGGT............................................................................................................ 23 2 3 4.67 14 14 0 0

Anti-sense strand reads

AAACCTCCTCGCCTGACTTCTATATTACTCAAACTTCTTTGTGACCTTCGACACACGTAGGCCCAACTCCATCATCCAACATACCAAATCTCAATGTGGGACCCTCAATTGACATGTTGGAAGATCGAAAGGAACCTCGTGTGAACTCGGTAGCTCCTTAAGAAGTAGAGAAATTAGACTGGTTCGGTTGGAGA
***********************************.......((.((.(((((((((.((((((..(((.(((.(((((((((((((..((.((.((...)).)).))))))))))))))).))).)))..))))))))))))...)))..)).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
.................................................................ACTCCATCATCCAAC.................................................................................................................. 15 0 8 0.38 3 3
...........................................................................................................ATTGATATGTTGGAAGATGGAGA................................................................ 23 3 8 0.13 1 1

Generated: 04/30/2015 at 05:34 PM