ID:

rno-let-7b

Coordinate:

chr7:126590627-126590711 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.7 -52.7 -52.2

Sense Strand Reads

TGGCCAGGGTGGGTGGGGAGCGGCTGGGCCTCCTCCAGAATGTGGACACCGCGGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTCGCCCCTCCGAAGATAACTATACAACCTACTGCCTTCCCTGAGGCGCCCAGGGACACGTCCACATGGAGGCCCAGTAAGCCACACGGAGCCA
***********************************.......(((...((.(((((.(((((((((((((((((((((((((((..(((....))))))).....)).)))))))))))))))))))))))))).))...))).......***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528818
Adult_testes_Mili_IP
GSM1528817
Adult_testes
........................................................TGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 0 1 40924.00 40924 40042 668 214
........................................................TGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 0 1 36535.00 36535 35935 533 67
........................................................TGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 1 1 30711.00 30711 30413 279 19
........................................................TGAGGTAGTAGGTTGTGTGGTTAT......................................................................................................... 24 2 2 9443.50 18887 18725 155 7
........................................................TGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 24 2 2 8720.00 17440 17341 88 11
........................................................TGAGGTAGTAGGTTGTGTGGTAA.......................................................................................................... 23 2 1 6968.00 6968 6940 17 11
........................................................TGAGGTAGTAGGTTGTGTGGTTAAA........................................................................................................ 25 2 1 3785.00 3785 3755 24 6
........................................................TGAGGTAGTAGGTTGTGTGGTTTT......................................................................................................... 24 1 2 3754.50 7509 7386 119 4
........................................................TGAGGTAGTAGGTTGTGTGGT............................................................................................................ 21 0 1 3551.00 3551 3343 52 156
........................................................TGAGGTAGTAGGTTGTGTGGTAT.......................................................................................................... 23 1 1 3371.00 3371 3339 27 5
........................................................TGAGGTAGTAGGTTGTGTGGTTTAA........................................................................................................ 25 1 1 2776.00 2776 2754 22 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 24 1 2 1705.00 3410 3373 36 1
........................................................TGAGGTAGTAGGTTGTGTGGTA........................................................................................................... 22 1 1 1542.00 1542 1525 2 15
........................................................TGAGGTAGTAGGTTGTGTGGTTAG......................................................................................................... 24 2 1 1464.00 1464 1461 3 0
.........................................................GAGGTAGTAGGTTGTGTGGTT........................................................................................................... 21 0 1 1306.00 1306 1296 1 9
.........................................................GAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 22 0 1 1200.00 1200 1187 9 4
........................................................TGAGGTAGTAGGTTGTGTGGTTG.......................................................................................................... 23 1 1 1049.00 1049 1041 5 3
.........................................................GAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 22 1 1 1020.00 1020 1019 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 25 2 2 913.00 1826 1783 42 1
........................................................TGAGGTAGTAGGTTGTGTGG............................................................................................................. 20 0 1 888.00 888 757 12 119
........................................................TGAGGTAGTAGGTTGTGTGGTTAAT........................................................................................................ 25 3 2 777.50 1555 1541 13 1
........................................................TGAGGTAGTAGGTTGTGTGGTTTTT........................................................................................................ 25 2 2 717.50 1435 1401 33 1
........................................................TGAGGTAGTAGGTTGTGTGGTTTTA........................................................................................................ 25 1 1 690.00 690 678 12 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 23 1 1 543.00 543 505 22 16
........................................................TGAGGTAGTAGGTTGTGTGGTTAGA........................................................................................................ 25 2 1 528.00 528 518 9 1
........................................................TGAGGTAGTAGGTTGTGTGGTAG.......................................................................................................... 23 2 1 486.00 486 476 5 5
........................................................TGAGGTAGTAGGTTGTGTGGTTTTAT....................................................................................................... 26 2 1 469.00 469 462 7 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 24 1 1 431.00 431 408 17 6
........................................................TGAGGTAGTAGGTTGTGTGGTAAA......................................................................................................... 24 3 3 376.00 1128 1125 0 3
.......................................................ATGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 24 2 1 366.00 366 364 1 1
........................................................TGAGGTAGTAGGTTGTGTGGTTGT......................................................................................................... 24 2 2 352.00 704 703 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTATA........................................................................................................ 25 2 1 333.00 333 332 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGA......................................................................................................... 24 2 2 330.50 661 653 8 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTTAA....................................................................................................... 26 2 1 303.00 303 302 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAAAT....................................................................................................... 26 3 1 299.00 299 299 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTAT......................................................................................................... 23 2 2 295.00 590 589 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTATT........................................................................................................ 25 3 2 289.00 578 577 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTAAT......................................................................................................... 24 3 2 283.50 567 566 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTTAGT........................................................................................................ 25 3 1 266.00 266 264 0 2
.........................................................GAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 23 2 2 263.50 527 526 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAT....................................................................................................... 26 2 1 254.00 254 244 10 0
.........................................................GAGGTAGTAGGTTGTGTGGTAA.......................................................................................................... 22 2 1 227.00 227 225 0 2
........................................................TGAGGTAGTAGGTTGTGTGGTTAAAA....................................................................................................... 26 3 2 222.00 444 444 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAA....................................................................................................... 26 2 2 196.50 393 389 4 0
........................................................TGAGGTAGTAGGTTGTGTGGTAAAA........................................................................................................ 25 3 1 193.00 193 190 2 1
........................................................TGAGGTAGTAGGTTGTGTGGTTAC......................................................................................................... 24 1 1 186.00 186 182 4 0
........................................................TGAGGTAGTAGGTTGTGTGGTTC.......................................................................................................... 23 1 1 183.00 183 180 3 0
........................................................TGAGGTAGTAGGTTGTGTGGTGA.......................................................................................................... 23 2 1 164.00 164 163 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTTATAT....................................................................................................... 26 3 1 143.00 143 143 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTAAA........................................................................................................ 24 2 1 120.00 120 119 1 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTT......................................................................................................... 23 1 2 119.00 238 236 0 2
........................................................TGAGGTAGTAGGTTGTGTGGTCA.......................................................................................................... 23 2 1 118.00 118 118 0 0
.........................................................GAGGTAGTAGGTTGTGTGGT............................................................................................................ 20 0 1 116.00 116 112 1 3
........................................................TGAGGTAGTAGGTTGTGTGGTTTTTT....................................................................................................... 26 3 2 115.00 230 230 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTG......................................................................................................... 24 1 1 114.00 114 105 9 0
........................................................TGAGGTAGTAGGTTGTGTGGTAAG......................................................................................................... 24 3 1 113.00 113 113 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTAA......................................................................................................... 25 3 2 108.00 216 206 7 3
........................................................TGAGGTAGTAGGTTGTGTGGTTTGT........................................................................................................ 25 2 1 104.00 104 104 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTATAA....................................................................................................... 26 3 1 99.00 99 98 1 0
.........................................................GAGGTAGTAGGTTGTGTGGTAT.......................................................................................................... 22 1 1 99.00 99 99 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTGA........................................................................................................ 25 1 1 96.00 96 82 14 0
........................................................TGAGGTAGTAGGTTGTGTGGTGT.......................................................................................................... 23 1 1 92.00 92 92 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTAA........................................................................................................ 24 1 1 91.00 91 91 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGAA........................................................................................................ 25 2 1 88.00 88 88 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTAT......................................................................................................... 25 3 3 84.67 254 243 9 2
........................................................TGAGGTAGTAGGTTGTGTGGTCT.......................................................................................................... 23 1 1 84.00 84 81 2 1
........................................................TGAGGGAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 83.00 83 75 8 0
........................................................TGAGGTAGTAGGTTGTGTGGTC........................................................................................................... 22 1 1 83.00 83 79 4 0
........................................................TGAGGTAGTAGGTCGTGTGGTT........................................................................................................... 22 1 1 81.00 81 78 3 0
........................................................TGCGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 79.00 79 72 6 1
........................................................TGAGGTAGTAGGTTGTGTGGTAGA......................................................................................................... 24 3 2 76.50 153 151 0 2
.......................................................ATGAGGTAGTAGGTTGTGTGGTAA.......................................................................................................... 24 3 1 75.00 75 73 0 2
........................................................TGAGGTAGTAGGTTGTCTGGTT........................................................................................................... 22 1 3 74.67 224 218 6 0
.......................................................ATGAGGTAGTAGGTTGTGTGGT............................................................................................................ 22 1 1 73.00 73 57 0 16
........................................................TGAGGTAGTAGGTCGTGTGGTTT.......................................................................................................... 23 1 1 72.00 72 71 1 0
........................................................TGCGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 68.00 68 66 1 1
........................................................TGAGGTAGTAGGTTGTGTGGTATT......................................................................................................... 24 2 2 65.00 130 130 0 0
........................................................TGAGGTAGAAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 62.00 62 56 6 0
........................................................TGGGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 62.00 62 60 1 1
........................................................TGAGGAAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 61.00 61 54 6 1
........................................................TGAGGTAGTAGGTTGTGTGGTATAA........................................................................................................ 25 2 1 60.00 60 59 1 0
........................................................TGAGGCAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 60.00 60 58 2 0
........................................................TGAGGTAGTAGGTAGTGTGGTTT.......................................................................................................... 23 1 1 60.00 60 57 3 0
........................................................TGAGGTAGAAGGTTGTGTGGTT........................................................................................................... 22 1 1 60.00 60 57 3 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTAT.......................................................................................................... 24 2 1 59.00 59 58 0 1
........................................................TGAGGTAGTAGGTTGTGTGGTAC.......................................................................................................... 23 2 1 59.00 59 59 0 0
........................................................TGCGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 58.00 58 57 1 0
........................................................TGAGGTAGGAGGTTGTGTGGTT........................................................................................................... 22 1 1 57.00 57 54 3 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTC......................................................................................................... 24 0 1 57.00 57 56 0 1
.........................................................GAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 23 1 2 57.00 114 114 0 0
........................................................TGAGGTAGGAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 56.00 56 52 4 0
........................................................TGAGGTAGCAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 55.00 55 52 3 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAGAA....................................................................................................... 26 3 1 55.00 55 55 0 0
........................................................TGAGGTAGTAGGTAGTGTGGTT........................................................................................................... 22 1 1 54.00 54 52 2 0
........................................................TGAGGTAGTAGGTAGTGTGGTTA.......................................................................................................... 23 2 1 54.00 54 50 4 0
........................................................TGAGGTAGTAGGTTGTGTGGTG........................................................................................................... 22 1 1 52.00 52 50 1 1
......................................................AATGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 24 2 1 52.00 52 52 0 0
......................................................AATGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 25 2 1 49.00 49 49 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAAAG....................................................................................................... 26 2 1 48.00 48 48 0 0
........................................................TGAGGCAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 48.00 48 45 3 0
.........................................................GAGGTAGTAGGTTGTGTGGTA........................................................................................................... 21 1 1 45.00 45 43 1 1
........................................................TGAGGTAGTAGGTTGTGTGGTAAGA........................................................................................................ 25 3 1 45.00 45 44 0 1
.........................................................GAGGTAGTAGGTTGTGTGGTTAG......................................................................................................... 23 2 1 44.00 44 44 0 0
........................................................TGAGGTAGTAGGTTGTGTG.............................................................................................................. 19 0 1 44.00 44 37 0 7
........................................................TGAGGTAGCAGGTTGTGTGGTT........................................................................................................... 22 1 1 43.00 43 41 1 1
........................................................TGAGGTAGTAGGTTGTGTGGTTTTAAT...................................................................................................... 27 3 1 43.00 43 42 1 0
........................................................TGAGGTAGTAGCTTGTGTGGTT........................................................................................................... 22 1 1 43.00 43 41 2 0
........................................................TGAGGTAGTAGATTGTGTGGTT........................................................................................................... 22 1 1 43.00 43 41 2 0
........................................................TGGGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 41.00 41 40 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTATA......................................................................................................... 24 2 2 41.00 82 82 0 0
........................................................TGAGGTAGGAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 40.00 40 40 0 0
........................................................TGAGGTAGTAGGTTGTGTGGA............................................................................................................ 21 1 1 39.00 39 33 1 5
......................................................AATGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 25 3 1 38.00 38 38 0 0
........................................................TGAGGAAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 38.00 38 35 3 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTTT......................................................................................................... 25 2 3 37.33 112 110 0 2
........................................................TGAGGTAGTAGATTGTGTGGTTT.......................................................................................................... 23 1 1 37.00 37 37 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 24 2 2 37.00 74 74 0 0
........................................................TGAGGTAGTAGGTTGTCTGGTTA.......................................................................................................... 23 2 3 36.67 110 107 3 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTTAAA...................................................................................................... 27 3 1 36.00 36 36 0 0
........................................................TGAGGTAGAAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 36.00 36 35 1 0
........................................................TGAGGTAGTAGGTTGTGTGGAA........................................................................................................... 22 2 2 35.50 71 67 0 4
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAG....................................................................................................... 26 1 1 35.00 35 35 0 0
........................................................TGAGGTAGTAGGTTGTGCGGTTT.......................................................................................................... 23 1 1 35.00 35 35 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTG.......................................................................................................... 22 1 1 34.00 34 34 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTTAA........................................................................................................ 26 2 1 33.00 33 33 0 0
........................................................TGAGGTAGTAGGTTGTGCGGTT........................................................................................................... 22 1 1 33.00 33 32 0 1
..............................................................................TCAGGGCAGTGATGTCGCCCCTCCG.................................................................................. 25 0 1 33.00 33 32 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTATT....................................................................................................... 26 3 2 33.00 66 65 0 1
........................................................TGAGGTAGTAGGTTGCGTGGTT........................................................................................................... 22 1 1 33.00 33 33 0 0
........................................................TGGGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 33.00 33 33 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTA........................................................................................................... 23 2 1 33.00 33 32 1 0
........................................................TGAGGTAGTAGGTTGTATGGTTAGA........................................................................................................ 25 3 4 32.50 130 129 0 1
........................................................TGAGGGAGTAGGTTGTGTGGTT........................................................................................................... 22 1 3 32.33 97 95 2 0
........................................................TGAGGTAGTAGGTTATGTGGTTT.......................................................................................................... 23 1 1 32.00 32 32 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTCA........................................................................................................ 25 0 1 31.00 31 31 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTAGT......................................................................................................... 24 3 2 30.50 61 61 0 0
........................................................TGAGGTAGTAGGTTGTCTGGTTT.......................................................................................................... 23 1 3 30.33 91 89 2 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTTA........................................................................................................ 24 1 1 30.00 30 30 0 0
.........................................................GAGGTAGTAGGTTGTGTGG............................................................................................................. 19 0 1 30.00 30 25 0 5
........................................................TGAGGTAGTAGGTTGTGT............................................................................................................... 18 0 1 30.00 30 24 0 6
........................................................TGAGGTAGTACGTTGTGTGGTTA.......................................................................................................... 23 2 1 30.00 30 30 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTACA........................................................................................................ 25 1 1 30.00 30 30 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTAAA........................................................................................................ 26 3 1 29.00 29 29 0 0
........................................................TGAGGTAGTAGGTCGTGTGGTTA.......................................................................................................... 23 2 2 28.50 57 54 3 0
........................................................TGAGGTAGTAAGTTGTGTGGTT........................................................................................................... 22 1 1 28.00 28 28 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGTAA....................................................................................................... 26 3 1 28.00 28 28 0 0
........................................................TGAGGTAGTAGGCTGTGTGGTT........................................................................................................... 22 1 1 28.00 28 27 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGTA........................................................................................................ 25 2 1 27.00 27 18 9 0
.....................................................AAATGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 25 3 1 27.00 27 27 0 0
........................................................TGAGGTAGTAGCTTGTGTGGTTA.......................................................................................................... 23 2 1 27.00 27 25 2 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAAAGT...................................................................................................... 27 3 1 26.00 26 26 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTCT......................................................................................................... 24 2 2 26.00 52 51 1 0
........................................................CGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 26.00 26 25 0 1
........................................................TGTGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 26.00 26 25 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTCAT......................................................................................................... 24 3 2 25.50 51 49 2 0
........................................................TGAGGTAGTAGGTTGTGTGGTTCA......................................................................................................... 24 2 2 24.50 49 49 0 0
........................................................TGAGGTAGTAGATTGTGTGGTTA.......................................................................................................... 23 2 1 24.00 24 24 0 0
........................................................TGAGGTAGTAGGTTATGTGGTTA.......................................................................................................... 23 2 1 24.00 24 24 0 0
........................................................TGAGGTAGTAGGTTCTGTGGTT........................................................................................................... 22 1 1 24.00 24 24 0 0
........................................................TGAGGTAGTAGGCTGTGTGGTTT.......................................................................................................... 23 1 1 24.00 24 23 1 0
........................................................AGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 24.00 24 24 0 0
........................................................TGAGGTAGTAGGTTGTG................................................................................................................ 17 0 1 23.00 23 12 0 11
........................................................TGAGGTAGTAGGTTGTGTGGTTGAT........................................................................................................ 25 3 2 23.00 46 46 0 0
........................................................TGAGGTCGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 23.00 23 23 0 0
........................................................AGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 23.00 23 23 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTAAC......................................................................................................... 24 2 1 23.00 23 22 0 1
........................................................CGAGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 23.00 23 23 0 0
........................................................TGAGGTAGTAGGTTATGTGGTT........................................................................................................... 22 1 1 23.00 23 23 0 0
........................................................TGTGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 23.00 23 22 1 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTTT........................................................................................................ 24 2 2 23.00 46 46 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTCG......................................................................................................... 24 2 1 23.00 23 5 18 0
........................................................TGAGGTAGTAGCTTGTGTGGTTT.......................................................................................................... 23 1 1 22.00 22 21 1 0
........................................................TGAGGTAGTACGTTGTGTGGTTT.......................................................................................................... 23 1 1 22.00 22 20 2 0
.........................................................GAGGTAGTAGGTTGTGTGGTTAGA........................................................................................................ 24 2 1 22.00 22 22 0 0
........................................................TGAGGTCGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 22.00 22 22 0 0
........................................................TGAGGTAGTAGGTTGCGTGGTTA.......................................................................................................... 23 2 1 22.00 22 22 0 0
........................................................AGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 22.00 22 22 0 0
........................................................TGAGGCAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 2 21.50 43 42 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTCT........................................................................................................ 25 1 1 21.00 21 20 0 1
........................................................TGAGGTAGTACGTTGTGTGGTT........................................................................................................... 22 1 1 21.00 21 18 2 1
........................................................CGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 21.00 21 21 0 0
........................................................TGAGGTAGTAGGTTGTATGGTTAC......................................................................................................... 24 2 3 21.00 63 63 0 0
........................................................TGAGGGAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 3 20.33 61 61 0 0
..............................................................................TCAGGGCAGTGATGTCGCCCCTCCGA................................................................................. 26 0 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGTTGTGTTGTT........................................................................................................... 22 1 1 20.00 20 20 0 0
........................................................TGAGGTAGTAAGTTGTGTGGTTT.......................................................................................................... 23 1 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGCTGTGTGGTTA.......................................................................................................... 23 2 1 20.00 20 20 0 0
........................................................TGACGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 20.00 20 19 1 0
........................................................TGAAGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAAAGA...................................................................................................... 27 3 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTACT........................................................................................................ 25 2 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGTAT....................................................................................................... 26 3 1 20.00 20 20 0 0
........................................................TGAGGTCGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 20.00 20 20 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAAC........................................................................................................ 25 3 2 19.50 39 39 0 0
..............................................................................................................CTATACAACCTACTGCCTTCCT..................................................... 22 1 1 19.00 19 19 0 0
........................................................TGAGGTAGTAGGTTCTGTGGTTT.......................................................................................................... 23 1 1 19.00 19 18 1 0
........................................................TGAGGTAGTAGGTTGTGTGA............................................................................................................. 20 1 1 19.00 19 10 0 9
.........................................................GAGGTAGTAGGTTGTGTGGTTGA......................................................................................................... 23 2 2 18.50 37 37 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGAAT....................................................................................................... 26 3 1 18.00 18 17 0 1
........................................................TGTGGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 18.00 18 18 0 0
........................................................TGAGGTAGTAGTTTGTGTGGTT........................................................................................................... 22 1 1 18.00 18 15 1 2
........................................................TGAGGTAGTAGGTTGTGTGGTAGAA........................................................................................................ 25 3 1 18.00 18 18 0 0
........................................................GGAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 18.00 18 18 0 0
........................................................TGAGGTGGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 18.00 18 18 0 0
........................................................TGAGGTAGTCGGTTGTGTGGTTT.......................................................................................................... 23 1 1 18.00 18 18 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTC.......................................................................................................... 22 1 1 18.00 18 17 1 0
........................................................TGAGGTGGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 18.00 18 17 1 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTTAT........................................................................................................ 26 3 2 17.50 35 35 0 0
........................................................TGCGGTAGTAGGTTGTGTGGTTAT......................................................................................................... 24 3 2 17.50 35 33 2 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAAT...................................................................................................... 27 3 2 17.50 35 35 0 0
........................................................TGAGGTAGTAGGTTCTGTGGTTA.......................................................................................................... 23 2 1 17.00 17 17 0 0
........................................................TGAGGTAGTAGGTTGTGTGGGTT.......................................................................................................... 23 1 1 17.00 17 17 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTAG......................................................................................................... 25 3 1 17.00 17 17 0 0
...........................................................GGTAGTAGGTTGTGTGGTTT.......................................................................................................... 20 0 1 17.00 17 16 1 0
........................................................TGAGGTAGCAGGTTGTGTGGTTA.......................................................................................................... 23 2 2 17.00 34 33 1 0
.....................................................AAATGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 26 3 1 17.00 17 17 0 0
........................................................TGAGGTAGTAGGTCGTGTGGTTAAA........................................................................................................ 25 3 1 17.00 17 17 0 0
........................................................TGAGGTAGTAGGTTGTGTGGCTT.......................................................................................................... 23 1 1 17.00 17 17 0 0
........................................................TGAAGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 17.00 17 16 1 0
........................................................TGAGGTAGTAGGTAGTGTGGTTAA......................................................................................................... 24 3 2 16.50 33 32 1 0
.......................................................ATGAGGTAGTAGGTTGTGTGGTTTA......................................................................................................... 25 2 2 16.50 33 33 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTAAT........................................................................................................ 24 3 3 16.33 49 49 0 0
..........................................................AGGTAGTAGGTTGTGTGGTT........................................................................................................... 20 0 1 16.00 16 16 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTCAA......................................................................................................... 24 3 3 16.00 48 48 0 0
..............................................................................TCAGGGCAGTGATGTCGCCCCTCCGT................................................................................. 26 1 1 16.00 16 16 0 0
........................................................TGAGGTAGTCGGTTGTGTGGTT........................................................................................................... 22 1 1 16.00 16 15 1 0
..............................................................................TCAGGGCAGTGATGTCGCCCCTCT................................................................................... 24 1 1 16.00 16 16 0 0
........................................................TGAGGTAGTGGGTTGTGTGGTT........................................................................................................... 22 1 1 16.00 16 16 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTGAAA....................................................................................................... 26 3 2 15.50 31 31 0 0
........................................................TGAGGTAGTAGTTTGTGTGGTTA.......................................................................................................... 23 2 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTTTA....................................................................................................... 26 3 3 15.00 45 45 0 0
..........................................................AGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 21 0 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGTGTGGATT.......................................................................................................... 23 1 1 15.00 15 15 0 0
........................................................TGAGGTACTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 15.00 15 14 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTTAG....................................................................................................... 26 1 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTAGAT....................................................................................................... 26 3 1 15.00 15 15 0 0
........................................................TGAGGTAATAGGTTGTGTGGTT........................................................................................................... 22 1 1 15.00 15 14 1 0
........................................................TGAGGTAGTAGGTTGTGTGGGT........................................................................................................... 22 1 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTATAT........................................................................................................ 25 3 2 15.00 30 21 9 0
.........................................................GAGGTAGTAGGTTGTGTGGTTAGT........................................................................................................ 24 3 1 15.00 15 15 0 0
........................................................TGAAGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGGGTGGTTT.......................................................................................................... 23 1 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGCGTGGTTT.......................................................................................................... 23 1 1 15.00 15 15 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAAA...................................................................................................... 27 3 2 14.50 29 29 0 0
........................................................TGAGGTAGTAGGTTGTGTGGAAT.......................................................................................................... 23 2 2 14.50 29 28 0 1
........................................................TGAGGTAGTCGGTTGTGTGGTTA.......................................................................................................... 23 2 1 14.00 14 14 0 0
........................................................TGAGGAAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 2 14.00 28 27 1 0
........................................................TGAGGTAGTAGGTTGTGTTGTTA.......................................................................................................... 23 2 1 14.00 14 14 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTCAA........................................................................................................ 25 2 1 14.00 14 14 0 0
........................................................TGAGGTAGTAAGTTGTGTGGTTA.......................................................................................................... 23 2 1 14.00 14 14 0 0
.......................................................TTGAGGTAGTAGGTTGTGTGGT............................................................................................................ 22 1 2 14.00 28 28 0 0
........................................................TGACGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 14.00 14 14 0 0
........................................................TGAGGTAGTGGGTTGTGTGGTTT.......................................................................................................... 23 1 1 14.00 14 14 0 0
.........................................................GAGGTAGTCGGTTGTGTGGTTT.......................................................................................................... 22 1 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTCG........................................................................................................ 25 1 1 13.00 13 3 10 0
........................................................TGAGGTAATAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 13.00 13 13 0 0
......................................................TATGAGGTAGTAGGTTGTGTGGT............................................................................................................ 23 2 1 13.00 13 13 0 0
.........................................................GAGGTAGTAGGTTGTGTGGTTTTAA....................................................................................................... 25 2 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTATTA........................................................................................................ 25 2 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTGGTGTGGTTT.......................................................................................................... 23 1 1 13.00 13 12 1 0
........................................................TGAGGTAATAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAGA...................................................................................................... 27 2 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGTTTGTGTGGTTT.......................................................................................................... 23 1 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAAC....................................................................................................... 26 2 1 13.00 13 12 1 0
........................................................GGAGGTAGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 13.00 13 13 0 0
........................................................TGAGGTAGTAGGTCGTGTGGTTAA......................................................................................................... 24 3 3 12.67 38 38 0 0
........................................................TGAGGTAGTAGGTTGTGCTGTTT.......................................................................................................... 23 2 2 12.50 25 24 1 0
........................................................TGAGGTAGTAGGTTGTGTGGTATTT........................................................................................................ 25 3 3 12.33 37 26 11 0
........................................................TGACGTAGTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 12.00 12 12 0 0
........................................................TGAGGTACTAGGTTGTGTGGTTA.......................................................................................................... 23 2 1 12.00 12 12 0 0
........................................................TGAGGTAGTAGGTTGTGTTGTTT.......................................................................................................... 23 1 1 12.00 12 11 1 0
.........................................................GAGGTAGTAGGTTGTGTGGTTGT......................................................................................................... 23 2 2 12.00 24 24 0 0
........................................................TGAGGTAGTAGGTTGTGTGTTT........................................................................................................... 22 1 1 12.00 12 12 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTCAAA........................................................................................................ 25 3 1 12.00 12 11 1 0
...........................................................GGTAGTAGGTTGTGTGGTT........................................................................................................... 19 0 1 12.00 12 12 0 0
........................................................TGAGGTAGTAGGTCGTGTGGTTAT......................................................................................................... 24 3 4 12.00 48 46 2 0
........................................................TGAGGTAGTAGGTTGTGTGGAT........................................................................................................... 22 1 1 12.00 12 12 0 0
........................................................TGAGGTAGTAGGTTGTTTGGTT........................................................................................................... 22 1 3 12.00 36 29 7 0
........................................................TGCGGTAGTAGGTTGTGTGGT............................................................................................................ 21 1 1 12.00 12 11 0 1
........................................................TGCGGTAGTAGGTTGTGTGGTTAC......................................................................................................... 24 2 1 12.00 12 12 0 0
..............................................................................TCAGGGCAGTGATGTCGCCCCTCC................................................................................... 24 0 1 12.00 12 12 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTAC........................................................................................................ 25 2 2 11.50 23 23 0 0
........................................................TGAGGGAGTAGGTTGTGTGGTTAA......................................................................................................... 24 3 4 11.25 45 44 1 0
........................................................TGAGGTAGTAGGTTGTGCGGTTA.......................................................................................................... 23 2 1 11.00 11 11 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTTTCAG....................................................................................................... 26 0 1 11.00 11 11 0 0
........................................................TGAGGTAGTAGGTTGTGTCGTTA.......................................................................................................... 23 2 1 11.00 11 11 0 0
..............................................................................TCAGGGCAGTGATGTCGCCCCTCCGAA................................................................................ 27 0 1 11.00 11 11 0 0
........................................................TGAGGTAGTGGGTTGTGTGGTTA.......................................................................................................... 23 2 1 11.00 11 11 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTAATA........................................................................................................ 25 3 1 11.00 11 11 0 0
........................................................TGAGATAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 11.00 11 11 0 0
........................................................TGAGGTGGTAGGTTGTGTGGTTT.......................................................................................................... 23 1 1 11.00 11 11 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTCG.......................................................................................................... 23 2 1 11.00 11 6 5 0
........................................................TGATGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 11.00 11 11 0 0
........................................................TGAGGTAGAAGGTTGTGTGGTTAAA........................................................................................................ 25 3 1 11.00 11 11 0 0
............................................................GTAGTAGGTTGTGTGGTT........................................................................................................... 18 0 1 11.00 11 11 0 0
.......................................................ATGAGGTAGTAGGTTGTGTGG............................................................................................................. 21 1 1 11.00 11 6 0 5
........................................................TCAGGTAGTAGGTTGTGTGGTT........................................................................................................... 22 1 1 11.00 11 11 0 0
........................................................TGAGGTAGAAGGTTGTGTGGTTTT......................................................................................................... 24 2 2 10.50 21 19 2 0
........................................................TGAGGTAGTAGGTTGTGTAGTT........................................................................................................... 22 1 3 10.00 30 30 0 0
........................................................TGAGGTAGTAGGTGGTGTGGTT........................................................................................................... 22 1 1 10.00 10 10 0 0
........................................................TGAGGTAGTAGGTTGTGTGGTCTT......................................................................................................... 24 2 2 10.00 20 19 1 0

Anti-sense strand reads

ACCGGTCCCACCCACCCCTCGCCGACCCGGAGGAGGTCTTACACCTGTGGCGCCCCACTCCATCATCCAACACACCAAAGTCCCGTCACTACAGCGGGGAGGCTTCTATTGATATGTTGGATGACGGAAGGGACTCCGCGGGTCCCTGTGCAGGTGTACCTCCGGGTCATTCGGTGTGCCTCGGT
***********************************.......(((...((.(((((.(((((((((((((((((((((((((((..(((....))))))).....)).)))))))))))))))))))))))))).))...))).......***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
...........................................................................................................ATTGATATGTTGGATGACGGAGT....................................................... 23 2 3 2.67 8 8
...........................................................................................................ATTGATATGTTGGATG.............................................................. 16 0 2 1.50 3 3
..........................................................................................................TATTGGTATGTTGGATGACGGA......................................................... 22 1 1 1.00 1 1
...........................................................................................................ATTGATATGTTGGATGA............................................................. 17 0 1 1.00 1 1
...........................................................................................................ATTGATATGTTGGATGATGGA......................................................... 21 1 3 1.00 3 3
.........................................................................................................TCATTGATATGTTGGATGATGGA......................................................... 23 3 7 0.71 5 5
............................................................................................................TTGATATGTTGGATGA............................................................. 16 0 3 0.67 2 2
...........................................................................................................ATTGATATGTTGGATGAAGGAG........................................................ 22 2 5 0.40 2 2
........................................................ACTCCATCATCCAAC.................................................................................................................. 15 0 8 0.38 3 3
...........................................................................................................ATTGATATGTTGGATGAGGGAG........................................................ 22 2 3 0.33 1 1
..........................................................................................................TATTGATATGTTGGAT............................................................... 16 0 3 0.33 1 1
............................................................................................................TTGATATGTTGGATGACGGAG........................................................ 21 1 3 0.33 1 1
...........................................................................................................ATTGATATGTTGGATGATGTA......................................................... 21 2 4 0.25 1 1
...........................................................................................................ATTGATATGTTGGATGATGG.......................................................... 20 1 4 0.25 1 1
...........................................................................................................ATTGGTATGTTGGATGACGGAG........................................................ 22 2 4 0.25 1 1
..........................................................................................................TATTGATATGTTGGAGGACGGAGT....................................................... 24 3 5 0.20 1 1
...........................................................................................................ATTGATATGTTGGATGATG........................................................... 19 1 5 0.20 1 1
..........................................................................................................TATTGGTGTGTTGGATGACGGAG........................................................ 23 3 10 0.20 2 2
...........................................................................................................ATTGATACGTTGGATGAGGGA......................................................... 21 2 5 0.20 1 1
...........................................................................................................ATTGGTATGTTGGATGA............................................................. 17 1 13 0.15 2 2
...........................................................................................................ATTGATATGTTAGATGACGGAG........................................................ 22 2 7 0.14 1 1
..........................................................................................................TATTGATACGTTGGATG.............................................................. 17 1 15 0.13 2 2
..........................................................................................................TATTGATATGTTGGAGGAAGGAG........................................................ 23 3 9 0.11 1 1
...........................................................................................................ATTGATACGTTGGATGATGGGA........................................................ 22 3 9 0.11 1 1
..........................................................................................................TATTGGTATGTTGGATG.............................................................. 17 1 11 0.09 1 1

Generated: 04/30/2015 at 05:49 PM