ID:

rno-let-7a-1

 Coordinate:

chr17:16417853-16417946 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.0 -42.9
mature
  1. chr17:16417865-16417886 +
  2. chr8:45753280-45753301 +
star
  1. chr17:16417916-16417937 +
  2. chr7:126590273-126590294 +

Sense Strand Reads

CCTGTGGTGCTCAACTGTGATTCCTTTCAGCATTTGCCCTGGATGTTGTCTTCACTGTGGGATGAGGTAGTAGGTTGTATAGTTTTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGATGGAAAAGTCTGCATTCGTGGATCTAGTAGGAAACCAAGAACTAACTGCAC
***********************************************.((((((((.(((((.(((((((((((((((((((((.....(((...((((....)))).))))))))))))))))))))))))))))).))))).)))...******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
..............................................................TGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 0 2 13044.00 26088 25457 448 183
..............................................................TGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 23 1 2 3271.50 6543 6477 58 8
..............................................................TGAGGTAGTAGGTTGTATAGTTT............................................................................................................. 23 0 2 2348.00 4696 4587 79 30
..............................................................TGAGGTAGTAGGTTGTATAGT............................................................................................................... 21 0 2 1860.50 3721 3514 95 112
..............................................................TGAGGTAGTAGGTTGTATAG................................................................................................................ 20 0 2 887.50 1775 1704 21 50
..............................................................TGAGGTAGGAGGTTGTATAGTTT............................................................................................................. 23 1 3 857.67 2573 2556 12 5
...............................................................GAGGTAGTAGGTTGTATAGTT.............................................................................................................. 21 0 2 433.00 866 856 2 8
..............................................................TGAGGTAGTAGGTTGTATAGTTAT............................................................................................................ 24 1 1 404.00 404 394 10 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTT............................................................................................................ 24 1 1 388.00 388 386 1 1
.............................................................ATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 23 0 1 355.00 355 350 0 5
..............................................................TGAGGTAGGAGGTTGTATAGTTAT............................................................................................................ 24 2 2 287.50 575 573 2 0
.............................................................ATGAGGTAGTAGGTTGTATGGTT.............................................................................................................. 23 1 3 279.67 839 768 41 30
..............................................................TGAGGTAGTAGGTTGTATAGTTTT............................................................................................................ 24 0 1 173.00 173 171 0 2
..............................................................TGAGGTAGTAGGTTGTATAGTA.............................................................................................................. 22 1 2 114.00 228 221 6 1
..............................................................TGAGGTAGTAGGTTGTATAGTAA............................................................................................................. 23 2 2 109.50 219 215 3 1
...............................................................GAGGTAGTAGGTTGTATAGTTA............................................................................................................. 22 1 2 107.00 214 214 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTG............................................................................................................. 23 1 4 95.75 383 365 18 0
.............................................................ATGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 24 1 1 93.00 93 93 0 0
.............................................................ATGAGGTAGTAGGTTGTGTGGTTAT............................................................................................................ 25 3 3 84.67 254 243 9 2
..............................................................TGAGGTAGTAGGTTGTAT.................................................................................................................. 18 0 4 82.50 330 295 2 33
.............................................................ATGAGGTAGTAGGTTGTATGGTTA............................................................................................................. 24 2 3 74.33 223 222 1 0
...............................................................GAGGTAGTAGGTTGTATAGT............................................................................................................... 20 0 2 72.50 145 140 0 5
...............................................................GAGGTAGTAGGTTGTATAGTTT............................................................................................................. 22 0 2 71.50 143 142 0 1
..............................................................TGAGGTAGTAGGTTGTATA................................................................................................................. 19 0 2 66.00 132 121 0 11
.............................................................ATGAGGTAGTAGGTTGTATAGT............................................................................................................... 22 0 1 62.00 62 59 2 1
..............................................................TGAGGTAGTAGGTTGTCTAGTT.............................................................................................................. 22 1 2 61.00 122 119 1 2
.............................................................ATGAGGTAGTAGGTTGTATAGTTT............................................................................................................. 24 0 1 58.00 58 58 0 0
.................................................................................................................CTATACAATCTACTGTCTTTCT........................................................... 22 1 2 56.50 113 109 3 1
.............................................................ATGAGGTAGGAGGTTGTATAGTT.............................................................................................................. 23 1 2 56.50 113 111 1 1
.............................................................ATGAGGTAGTAGGTTGTATGGTTT............................................................................................................. 24 1 3 56.00 168 163 1 4
............................................................AATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 24 1 1 50.00 50 49 0 1
..............................................................TGAGGGAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 48.50 97 92 5 0
..............................................................TGAGGTAGTAGGTTGTATCGTT.............................................................................................................. 22 1 4 46.50 186 183 2 1
..............................................................TGAGGTAGGAGGTTGTATAGTTTTT........................................................................................................... 25 2 1 46.00 46 46 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTAT............................................................................................................. 23 1 2 41.50 83 78 4 1
..............................................................TGAGGTAGGAGGTTGTATAGTAT............................................................................................................. 23 2 4 39.50 158 158 0 0
.............................................................ATGAGGTAGTAGGTTGTGTGGTTTT............................................................................................................ 25 2 3 37.33 112 110 0 2
.............................................................ATGAGGTAGGAGGTTGTATAGTTT............................................................................................................. 24 1 1 36.00 36 36 0 0
..............................................................TGAGGTAGTAGGTTGTATGGTTAGA........................................................................................................... 25 3 4 32.50 130 129 0 1
....................................................................................TTAGGGTCACACCCACCACTGGGA...................................................................................... 24 0 1 32.00 32 31 1 0
..............................................................TGAGGTAGTAGGTTGTATAGTTAAA........................................................................................................... 25 2 2 31.50 63 63 0 0
..............................................................TGAGGTAGTAGGTTGTATAA................................................................................................................ 20 1 2 31.50 63 56 0 7
..............................................................TGAGGTAGTAGGTTGTATAGA............................................................................................................... 21 1 2 31.00 62 57 0 5
..............................................................TGAGGTAGTAGGTTGCATAGTT.............................................................................................................. 22 1 3 30.33 91 90 1 0
..............................................................TGAGGTAGTAGCTTGTATAGTT.............................................................................................................. 22 1 4 29.50 118 112 4 2
...............................................................GAGGTAGTAGGTTGTATAG................................................................................................................ 19 0 2 29.50 59 59 0 0
...........................................................AAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 25 2 1 29.00 29 29 0 0
............................................................AATGAGGTAGTAGGTTGTATGGTT.............................................................................................................. 24 2 3 28.67 86 74 12 0
..............................................................TGAGGTAGTAGGTCGTATAGTT.............................................................................................................. 22 1 2 28.50 57 52 5 0
..............................................................TGAGGTAGTAGGTTGTATGGTTTTA........................................................................................................... 25 1 2 27.00 54 54 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTC.............................................................................................................. 22 1 2 24.50 49 48 1 0
.............................................................ATGAGGTAGTAGGTTGTATAG................................................................................................................ 21 0 1 24.00 24 20 0 4
...............................................................GAGGTAGGAGGTTGTATAGTTT............................................................................................................. 22 1 3 23.67 71 70 1 0
..............................................................TGAGGAAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 23.50 47 46 1 0
..............................................................TGAGGTAGTAGGTAGTATAGTT.............................................................................................................. 22 1 2 22.00 44 42 2 0
..............................................................TGAGGCAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 22.00 44 43 1 0
..............................................................TGCGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 21.50 43 41 2 0
...............................................................GAGGTAGGAGGTTGTATAGTTTT............................................................................................................ 23 1 1 20.00 20 20 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGT............................................................................................................... 22 1 3 20.00 60 52 0 8
..............................................................TGAGGTAGTAGGTTGTATAGTTGT............................................................................................................ 24 1 2 19.50 39 38 0 1
..............................................................TGAGGTAGGAGGTTGTATAGTTTTA........................................................................................................... 25 1 1 19.00 19 19 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTTAT............................................................................................................ 25 2 2 17.50 35 35 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTAGG......................................................................................................... 27 0 1 17.00 17 17 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTAG............................................................................................................ 24 2 2 17.00 34 34 0 0
..............................................................TGGGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 17.00 34 34 0 0
..............................................................TGAGGTAGAAGGTTGTATAGTT.............................................................................................................. 22 1 3 16.67 50 48 2 0
..............................................................TGAGGTAGTAGGTTGTATAGTTC............................................................................................................. 23 1 2 16.00 32 30 2 0
...............................................................GAGGTAGTAGGTTGTATAGTTAT............................................................................................................ 23 1 1 16.00 16 16 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTTTT.......................................................................................................... 26 3 1 15.00 15 15 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTATT............................................................................................................ 24 2 1 15.00 15 15 0 0
..............................................................TGAGGTAGTAGGTTGTCTAGTTA............................................................................................................. 23 2 2 14.50 29 29 0 0
..............................................................TGAGGTAGTAGGTTGTACAGTT.............................................................................................................. 22 1 3 14.33 43 42 1 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTT........................................................................................................... 25 1 1 14.00 14 14 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTTTT............................................................................................................ 25 1 2 14.00 28 23 5 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTAA........................................................................................................... 25 2 3 14.00 42 42 0 0
..............................................................TGAGGTAGTAGGTTGTGTAGTTAT............................................................................................................ 24 2 1 14.00 14 14 0 0
............................................................AATGAGGTAGTAGGTTGTATAGTTT............................................................................................................. 25 1 1 13.00 13 13 0 0
..............................................................TGAGGTAGTAGGTTGTATCGTTA............................................................................................................. 23 2 4 13.00 52 52 0 0
..............................................................AGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 3 12.67 38 38 0 0
...............................................................GAGGTAGGAGGTTGTATAGTTAT............................................................................................................ 23 2 2 12.00 24 24 0 0
.............................................................ATGAGGTAGGAGGTTGTATAGTTGT............................................................................................................ 25 2 2 12.00 24 24 0 0
.................................................................................................................CTATACAATCTACTGTCTTTCC........................................................... 22 0 2 12.00 24 24 0 0
..............................................................TGAGGTAGCAGGTTGTATAGTT.............................................................................................................. 22 1 3 12.00 36 32 4 0
..............................................................TGAGGTAGTAGGTTGTATCGTTT............................................................................................................. 23 1 4 11.75 47 45 1 1
.............................................................TTGAGGTAGTAGGTTGTATAGT............................................................................................................... 22 1 3 11.67 35 35 0 0
..............................................................CGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 11.50 23 23 0 0
.............................................................ATGAGGTAGGAGGTTGTATAGT............................................................................................................... 22 1 2 11.50 23 16 6 1
.............................................................ATGAGGTAGGAGGTTGTATAGTTA............................................................................................................. 24 2 2 11.50 23 23 0 0
..............................................................TGCGGTAGTAGGTTGTATAGTTA............................................................................................................. 23 2 2 11.00 22 22 0 0
..............................................................TGAGGTAGTAGGTTGCATAGTTA............................................................................................................. 23 2 3 10.67 32 31 1 0
..............................................................TGAGGTAGTAGGTTGTATGGTTATA........................................................................................................... 25 2 2 10.50 21 21 0 0
.................................................................................................................CTATACAATCTACTGTCTTTC............................................................ 21 0 2 10.50 21 20 1 0
..............................................................TGAGGTAGTAGGTTGTGTAGTT.............................................................................................................. 22 1 3 10.00 30 30 0 0
..............................................................TGAGGTCGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 10.00 20 19 1 0
............................................................AATGAGGTAGTAGGTTGTATAGT............................................................................................................... 23 1 1 10.00 10 10 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTCA............................................................................................................. 23 2 2 10.00 20 20 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTG.............................................................................................................. 22 1 2 10.00 20 20 0 0
..............................................................TGTGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 9.50 19 18 0 1
..............................................................TGAGGTAGTAGGTTATATAGTT.............................................................................................................. 22 1 2 9.50 19 18 1 0
..............................................................GGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 9.00 18 18 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTATA........................................................................................................... 25 2 1 9.00 9 9 0 0
..............................................................TGAGGTAGTAGGTTGTGTAGTTTT............................................................................................................ 24 1 1 9.00 9 8 1 0
..............................................................TGAGGGAGTAGGTTGTATAGTTA............................................................................................................. 23 2 2 9.00 18 17 1 0
..............................................................TGAGGTAGTAGGTTGTATGGTTTTAT.......................................................................................................... 26 2 2 8.50 17 17 0 0
............................................................AATGAGGTAGGAGGTTGTATAGTT.............................................................................................................. 24 2 2 8.50 17 17 0 0
..............................................................TGAGGTAGTAGGTTCTATAGTT.............................................................................................................. 22 1 2 8.50 17 17 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAG..................................................................................... 25 0 1 8.00 8 8 0 0
...........................................................AAATGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 26 3 1 8.00 8 8 0 0
....................................................................................TTAGGGTCACACCCACCACTGGG....................................................................................... 23 0 1 8.00 8 8 0 0
..............................................................TGAGGTAGTAGGCTGTATAGTT.............................................................................................................. 22 1 2 8.00 16 15 1 0
............................................................TATGAGGTAGTAGGTTGTATAGT............................................................................................................... 23 1 1 8.00 8 8 0 0
.............................................................ATGAGGTAGGAGGTTGTATAGTTAT............................................................................................................ 25 2 1 8.00 8 8 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTA.............................................................................................................. 23 2 3 8.00 24 22 0 2
..............................................................TGAGGTAGTAGGTTGCATAGTTT............................................................................................................. 23 1 3 8.00 24 24 0 0
..............................................................TGAGGTAGTAGGTTGTATCGT............................................................................................................... 21 1 4 7.75 31 29 2 0
..............................................................TGAGGTAGTAGGTTGTGTAGTTT............................................................................................................. 23 1 3 7.67 23 20 3 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTAA........................................................................................................... 25 1 2 7.50 15 14 0 1
..............................................................TGAGGTAGTAGTTTGTATAGTT.............................................................................................................. 22 1 5 7.40 37 36 0 1
..............................................................TGAGGTAGTAGGTTGTATTGTT.............................................................................................................. 22 1 5 7.40 37 36 1 0
............................................................AATGAGGTAGTAGGTTGTATGGTTT............................................................................................................. 25 2 3 7.33 22 22 0 0
...........................................................AAATGAGGTAGTAGGTTGTATGGTT.............................................................................................................. 25 3 4 7.25 29 23 6 0
..........................................................AAAATGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 26 3 3 7.00 21 21 0 0
..............................................................TGAGGGAGTAGGTTGTATAGTTT............................................................................................................. 23 1 2 7.00 14 12 2 0
..............................................................TGAGGTAGTCGGTTGTATAGTT.............................................................................................................. 22 1 2 7.00 14 13 1 0
.............................................................ATGAGGTAGTAGGTTGTAT.................................................................................................................. 19 0 1 7.00 7 4 0 3
..............................................................TGGGGTAGTAGGTTGTATAGTTA............................................................................................................. 23 2 2 7.00 14 13 1 0
..............................................................TGAGGTAGTAGGTTGTTTAGTT.............................................................................................................. 22 1 2 7.00 14 13 1 0
..............................................................TGAGGTAGTAGGTTGTATAGTTAGA........................................................................................................... 25 2 1 7.00 7 6 0 1
.............................................................ATGAGGTAGTAGGTTGTGTGGTTTTT........................................................................................................... 26 3 3 6.67 20 20 0 0
..............................................................TGAGGTAGTAGGTCGTATAGTTA............................................................................................................. 23 2 3 6.67 20 19 1 0
..............................................................TGAGGTAGGAGGTTGTATAGTTGTAT.......................................................................................................... 26 3 2 6.50 13 13 0 0
..............................................................TGACGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 6.50 13 13 0 0
..............................................................TGAGGTAGTAGGTTGTCTAGT............................................................................................................... 21 1 2 6.50 13 12 1 0
............................................................AATGAGGTAGTAGGTTGTATGGTTA............................................................................................................. 25 3 4 6.50 26 23 3 0
..............................................................TGAGGTGGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 6.50 13 13 0 0
..............................................................TGAGGTAGTAGGTTGTCTAG................................................................................................................ 20 1 2 6.50 13 12 1 0
.............................................................ATGAGGTAGTAGGTTGTATGGTAA............................................................................................................. 24 3 4 6.50 26 26 0 0
..............................................................TGAGGTAGTAGGTTGTATAT................................................................................................................ 20 1 2 6.50 13 12 0 1
..............................................................TGAGGTAGTAGGTCGTATAGTTT............................................................................................................. 23 1 2 6.50 13 12 1 0
.............................................................ATGAGGTAGTAGGTTGTATGG................................................................................................................ 21 1 3 6.33 19 12 0 7
..............................................................TGAGGTAGTAGCTTGTATAGTTT............................................................................................................. 23 1 3 6.33 19 19 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTGTA........................................................................................................... 25 2 2 6.00 12 12 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTAGGGT....................................................................................................... 29 0 1 6.00 6 6 0 0
..............................................................TGAGGTAGTAAGTTGTATAGTT.............................................................................................................. 22 1 3 6.00 18 16 2 0
..............................................................TGAGGTAGTGGGTTGTATAGTT.............................................................................................................. 22 1 2 6.00 12 12 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTCT............................................................................................................ 24 1 1 6.00 6 1 5 0
..............................................................TGAGGTAGTAGGTTGTCTAGTTT............................................................................................................. 23 1 2 6.00 12 12 0 0
............................................................AATGAGGTAGGAGGTTGTATAGTTT............................................................................................................. 25 2 1 6.00 6 6 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAGATAAT................................................................................ 30 1 1 6.00 6 6 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAT..................................................................................... 25 1 1 6.00 6 6 0 0
..............................................................TGAGGTAGTAGGTAGTATAGTTT............................................................................................................. 23 1 2 6.00 12 12 0 0
...............................................................GAGGTAGTAGGTTGTATAGTTTT............................................................................................................ 23 0 1 6.00 6 6 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTCT............................................................................................................. 23 1 2 6.00 12 11 1 0
............................................................AATGAGGTAGTAGGTTGTGTGGTTTT............................................................................................................ 26 3 3 5.67 17 17 0 0
..............................................................TGAGGTAGTAGGTTGTATAGCG.............................................................................................................. 22 2 2 5.50 11 0 11 0
..............................................................TGAGGTAGGAGGTTGTATAGTTCT............................................................................................................ 24 2 2 5.50 11 11 0 0
..............................................................TGAGGTAGAAGGTTGTATAGTTT............................................................................................................. 23 1 2 5.50 11 11 0 0
..............................................................TGAGGAAGTAGGTTGTATAGTTT............................................................................................................. 23 1 2 5.50 11 11 0 0
..............................................................TGAGGGAGTAGGTTGTATAGT............................................................................................................... 21 1 2 5.50 11 9 2 0
..............................................................TGAGGTAGTACGTTGTATAGTT.............................................................................................................. 22 1 2 5.50 11 11 0 0
..............................................................TGAGGTAGTAGGTTGTGTAGTTA............................................................................................................. 23 2 3 5.33 16 16 0 0
..............................................................TGAGGTAGTAGGTTGTATAGCT.............................................................................................................. 22 1 2 5.00 10 9 1 0
..............................................................TGAGGTAGTAGGTTCTATAGTTA............................................................................................................. 23 2 2 5.00 10 9 0 1
.............................................................ATGAGGTAGGAGGTTGTATAG................................................................................................................ 21 1 2 5.00 10 9 0 1
..............................................................TGAGGTAGTAGGTTGTATAGTGT............................................................................................................. 23 1 2 5.00 10 10 0 0
.............................................................ATGCGGTAGTAGGTTGTATAGTT.............................................................................................................. 23 1 1 5.00 5 5 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTATT........................................................................................................... 25 3 4 5.00 20 20 0 0
..............................................................TGAGGAAGTAGGTTGTATAGTTA............................................................................................................. 23 2 2 5.00 10 9 1 0
..............................................................TGCGGTAGTAGGTTGTATAGTTT............................................................................................................. 23 1 2 5.00 10 10 0 0
...........................................................AAATGAGGTAGTAGGTTGTATAGTTT............................................................................................................. 26 2 1 5.00 5 5 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTG............................................................................................................ 24 1 2 5.00 10 3 7 0
............................................................AATGAGGTAGTAGGTTGTATGGT............................................................................................................... 23 2 3 4.67 14 14 0 0
..............................................................TGAGGTAGTAGGTCGTATAGT............................................................................................................... 21 1 2 4.50 9 8 1 0
..............................................................TGAAGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 4.50 9 9 0 0
..............................................................TGAGGTAGTAGGTTGTATGGTTAAAG.......................................................................................................... 26 3 4 4.50 18 18 0 0
..............................................................TGAGGTAGTAGGTTGTATACTT.............................................................................................................. 22 1 2 4.50 9 8 0 1
..............................................................TGAGGTACTAGGTTGTATAGTT.............................................................................................................. 22 1 2 4.50 9 9 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTAG............................................................................................................. 23 2 5 4.40 22 22 0 0
..............................................................TGAGGTAGTAGCTTGTATAGTTA............................................................................................................. 23 2 5 4.40 22 22 0 0
..............................................................TGAGGTAGTAGGTTGTAAA................................................................................................................. 19 1 3 4.33 13 11 0 2
..............................................................TGAGGTAGTAGGTTGTATAGTGA............................................................................................................. 23 2 3 4.33 13 13 0 0
..............................................................TGAGGTAGTAGGTTGTATAGAA.............................................................................................................. 22 2 3 4.33 13 11 0 2
..............................................................TGAGGTAGAAGGTTGTATAGTTA............................................................................................................. 23 2 4 4.25 17 15 2 0
.............................................................ATGAGGTAGTAGGTTGTATAGTTAA............................................................................................................ 25 2 2 4.00 8 8 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAGATAA................................................................................. 29 0 1 4.00 4 4 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGT...................................................................................... 24 1 1 4.00 4 4 0 0
.............................................................ATGAGGTAGGAGGTTGTATAGTTTT............................................................................................................ 25 1 1 4.00 4 4 0 0
..................................................................................................................TATACAATCTACTGTCTTTCT........................................................... 21 1 2 4.00 8 8 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTC........................................................................................................... 25 1 1 4.00 4 4 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTAC............................................................................................................ 24 2 3 4.00 12 12 0 0
..............................................................TGCGGTAGTAGGTTGTATAGT............................................................................................................... 21 1 2 4.00 8 6 1 1
.............................................................ATGAGGTAGTAGGTTGTATAGTA.............................................................................................................. 23 1 1 4.00 4 4 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTATT........................................................................................................... 25 2 1 4.00 4 4 0 0
....................................................................................TTAGGGTCACACCCACCACTGGA....................................................................................... 23 1 1 4.00 4 4 0 0
..............................................................TGAGGTAGTAGGTCGTATAG................................................................................................................ 20 1 2 4.00 8 7 1 0
..............................................................TGAGGTAGTAGGTTGTATGGTTATAA.......................................................................................................... 26 3 3 4.00 12 12 0 0
..............................................................TGAGGCAGTAGGTTGTATAGTTT............................................................................................................. 23 1 2 4.00 8 8 0 0
..............................................................TGAGGTAGCAGGTTGTATAGTTT............................................................................................................. 23 1 2 4.00 8 8 0 0
............................................................AATGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 25 2 1 4.00 4 4 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAA..................................................................................... 25 1 1 4.00 4 4 0 0
....................................................................................TTAGGGTCACACCCACCACTGGGAGA.................................................................................... 26 0 1 4.00 4 4 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTGT........................................................................................................... 25 2 2 4.00 8 8 0 0
..............................................................TGAGGTAGTAGGTTGTAA.................................................................................................................. 18 1 8 3.88 31 31 0 0
..............................................................TGAGGTAGTAGCTTGTATAGT............................................................................................................... 21 1 4 3.75 15 14 1 0
..............................................................TGAGGTAGAAGGTTGTATAGT............................................................................................................... 21 1 3 3.67 11 9 2 0
..............................................................TGAGGGAGTAGGTTGTATAG................................................................................................................ 20 1 3 3.67 11 11 0 0
..............................................................TGAGGTAGGAGGTTGTATCGTTT............................................................................................................. 23 2 5 3.60 18 18 0 0
..............................................................TGAGGTAATAGGTTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
..............................................................TGAGGTAGTAGGTTGTTTAGTTA............................................................................................................. 23 2 2 3.50 7 7 0 0
..............................................................TGAGATAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTGTAA.......................................................................................................... 26 3 2 3.50 7 7 0 0
..............................................................TGAGCTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 3.50 7 7 0 0
.................................................................................................................CTATACAATCTACTGTCTTTCA........................................................... 22 1 2 3.50 7 7 0 0
..............................................................TGAGGCAGTAGGTTGTATAG................................................................................................................ 20 1 2 3.50 7 6 0 1
...............................................................GAGGTAGTAGGTTGTATAGTTC............................................................................................................. 22 1 2 3.50 7 7 0 0
...............................................................GAGGTAGTAGGTTGTATAGTA.............................................................................................................. 21 1 2 3.50 7 7 0 0
..............................................................TGAGGCAGTAGGTTGTATAGT............................................................................................................... 21 1 2 3.50 7 7 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTGT............................................................................................................. 23 2 3 3.33 10 10 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTAGA........................................................................................................... 25 3 3 3.33 10 10 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTC............................................................................................................ 24 2 3 3.33 10 10 0 0
..............................................................TGAGGTAGTAGGTTGTATGGTTTTAA.......................................................................................................... 26 2 3 3.33 10 10 0 0
...............................................................GAGGTAGTAGGTTGTAT.................................................................................................................. 17 0 4 3.25 13 13 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTCGTAT.......................................................................................................... 26 3 1 3.00 3 3 0 0
..............................................................TGGGGTAGTAGGTTGTATAGT............................................................................................................... 21 1 2 3.00 6 6 0 0
..............................................................TGAGGTAGTAGGTTGTATGGTTATAT.......................................................................................................... 26 3 2 3.00 6 5 1 0
.............................................................ATGAGGTAGTAGGTTGTGTGGTTGT............................................................................................................ 25 3 4 3.00 12 12 0 0
..............................................................TGAGGTAGTAGGTTGTATCGTTAT............................................................................................................ 24 2 2 3.00 6 6 0 0
.............................................................ATGAGGTAGGAGGTTGTATAGTAT............................................................................................................. 24 2 1 3.00 3 3 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGTAA............................................................................................................. 24 2 1 3.00 3 3 0 0
............................................................AATGAGGTAGTAGGTTGTATAG................................................................................................................ 22 1 1 3.00 3 3 0 0
..............................................................TGAGGTAGTAGGTTGTCTAGTTTT............................................................................................................ 24 1 1 3.00 3 3 0 0
.............................................................ATGAGGTAGTAGGTTGTATA................................................................................................................. 20 0 1 3.00 3 3 0 0
............................................................AATGAGGTAGGAGGTTGTATAGTTAT............................................................................................................ 26 3 1 3.00 3 3 0 0
.............................................................ATGAGGTAGTAGGTCGTATAGTT.............................................................................................................. 23 1 1 3.00 3 3 0 0
..............................................................TGAGGTAGTACGTTGTATAGTTA............................................................................................................. 23 2 2 3.00 6 6 0 0
.................................................................................................................CTATACAATCTACTGTCTTT............................................................. 20 0 2 3.00 6 5 0 1
..............................................................TGAGGTAGGAGGTTGTATAGTATTT........................................................................................................... 25 3 1 3.00 3 3 0 0
.................................................................................................................CTATACAATCTACTGTCTTTT............................................................ 21 1 2 3.00 6 5 0 1
..............................................................TGAGGGAGGAGGTTGTATAGTTT............................................................................................................. 23 2 3 3.00 9 9 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTA........................................................................................................... 25 0 1 3.00 3 3 0 0
..............................................................TTAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 3.00 6 5 0 1
..............................................................................................................TAACTATACAATCTACTGTCTTTC............................................................ 24 0 2 3.00 6 6 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGTAC............................................................................................................. 24 2 1 3.00 3 3 0 0
..............................................................TGAGGTAGTAGGTAGTATAGTTA............................................................................................................. 23 2 3 3.00 9 9 0 0
.............................................................ATGAGGTAGTAGGTTGTATAA................................................................................................................ 21 1 1 3.00 3 2 1 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTTAA.......................................................................................................... 26 2 1 3.00 3 3 0 0
..........................................................GTTATGAGGTAGTAGGTTGTATA................................................................................................................. 23 2 1 3.00 3 3 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTTAGA........................................................................................................... 26 3 1 3.00 3 3 0 0
..............................................................TGAGGTAGTAGGTTATATAGTTA............................................................................................................. 23 2 2 3.00 6 6 0 0
.................................................................................................................CTATACAATCTACTGTCTTTCCA.......................................................... 23 1 2 3.00 6 6 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGTTTT............................................................................................................ 25 0 1 3.00 3 3 0 0
..............................................................TGAGGTAGGAGGTTGTATAGTTTTAT.......................................................................................................... 26 2 1 3.00 3 3 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTCTT............................................................................................................ 24 1 1 3.00 3 3 0 0
...........................................................AAATGAGGTAGTAGGTTGTATAG................................................................................................................ 23 2 1 3.00 3 3 0 0
..............................................................TGAGGTAGTAGGTTGTATGGTTTGA........................................................................................................... 25 2 4 2.75 11 11 0 0
..............................................................TGAGGTAGGAGGTCGTATAGTTT............................................................................................................. 23 2 3 2.67 8 8 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTAT............................................................................................................. 24 2 3 2.67 8 8 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTTG............................................................................................................. 24 2 3 2.67 8 8 0 0
..............................................................TGAGGAAGTAGGTTGTATAGT............................................................................................................... 21 1 3 2.67 8 8 0 0
.............................................................ATGCGGTAGTAGGTTGTATGGTT.............................................................................................................. 23 2 3 2.67 8 5 3 0
...............................................................GAGGAAGTAGGTTGTATAGTT.............................................................................................................. 21 1 3 2.67 8 8 0 0
..............................................................TGAGGCAGTAGGTTGTATAGTTA............................................................................................................. 23 2 3 2.67 8 8 0 0
..............................................................TGAGGTAGTCGGTTGTATAGT............................................................................................................... 21 1 2 2.50 5 5 0 0
...............................................................GAGGTAGTAGGTTGTATAGTTG............................................................................................................. 22 1 4 2.50 10 10 0 0
...............................................................GAGGGAGTAGGTTGTATAGTT.............................................................................................................. 21 1 2 2.50 5 5 0 0
...............................................................GAGGTAGTAGCTTGTATAGTT.............................................................................................................. 21 1 4 2.50 10 10 0 0
..............................................................TGAGGTAGTAGGTTGTTTAGTTT............................................................................................................. 23 1 2 2.50 5 4 1 0
..............................................................TGAGGTAGTAGGTTGTATCG................................................................................................................ 20 1 4 2.50 10 9 1 0
..............................................................TGAGGTAGTAGGTTGGATAGTT.............................................................................................................. 22 1 2 2.50 5 4 1 0
.............................................................ATGAGGTAGGAGGTTGTATAGTTATT........................................................................................................... 26 3 2 2.50 5 5 0 0
..............................................................TCAGGTAGTAGGTTGTATAGTT.............................................................................................................. 22 1 2 2.50 5 5 0 0
...............................................................GAGGTAGTAGGCTGTATAGTT.............................................................................................................. 21 1 2 2.50 5 5 0 0
...............................................................GCGGTAGTAGGTTGTATAGTT.............................................................................................................. 21 1 2 2.50 5 5 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTCG............................................................................................................ 24 2 2 2.50 5 0 5 0
..............................................................TGAGGTAGTAGGTTGTATTGTTA............................................................................................................. 23 2 6 2.50 15 15 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGTTAAA........................................................................................................... 26 3 2 2.50 5 5 0 0
..............................................................CGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 23 2 2 2.50 5 4 1 0
..............................................................AGAGGTAGTAGGTTGTATAGTTA............................................................................................................. 23 2 3 2.33 7 7 0 0
..............................................................TGAGGTAGTAGGTTGCATAGT............................................................................................................... 21 1 3 2.33 7 6 1 0
..............................................................TGAGGTAGTAGGTTGTATAAA............................................................................................................... 21 2 3 2.33 7 4 0 3
.............................................................ATGAGGTAGTAGGTTGTATGGTTAG............................................................................................................ 25 3 3 2.33 7 7 0 0
.............................................................ATGAGGTAGTAGGTTGTATGGAT.............................................................................................................. 23 2 3 2.33 7 5 1 1
..............................................................TGAGGTAGTAGGTTGCATAG................................................................................................................ 20 1 3 2.33 7 6 1 0
..............................................................TGAGGTAGTAGGTTGTA................................................................................................................... 17 0 4 2.25 9 8 0 1
..............................................................TGAGGTAGTAGTTTGTATAGTTT............................................................................................................. 23 1 4 2.25 9 9 0 0
........................................................GTGAAGTGAGGTAGTAGGTTGTATAGTT.............................................................................................................. 28 3 1 2.00 2 2 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTTTTAGT......................................................................................................... 27 1 1 2.00 2 2 0 0
....................................................................................TTAGGGTCACACCCACCACTGGAT...................................................................................... 24 2 1 2.00 2 2 0 0
...............................................................GAGGTAGTAGGTTGTATAGTTACA........................................................................................................... 24 2 1 2.00 2 2 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGTTG............................................................................................................. 24 1 1 2.00 2 2 0 0
..............................................................TGAGGTAGTAGGTTGTGTAGT............................................................................................................... 21 1 3 2.00 6 5 1 0
..............................................................TGAGGTATTAGGTTGTATAGTT.............................................................................................................. 22 1 2 2.00 4 4 0 0
..............................................................TGAGGTAGTAGGTTGTATAGTATT............................................................................................................ 24 1 1 2.00 2 2 0 0
.............................................................ATGAGGTAGTAGGATGTATAGTT.............................................................................................................. 23 1 1 2.00 2 2 0 0
..............................................................TGAGGTAGTTGGTTGTATAGTT.............................................................................................................. 22 1 2 2.00 4 4 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGCT.............................................................................................................. 23 1 1 2.00 2 2 0 0
.............................................................ATGAGGTAGTAGGTTGTATAGAA.............................................................................................................. 23 2 1 2.00 2 2 0 0
.................................................................................................................CTATACAATCTACTGTCTTTTT........................................................... 22 2 6 2.00 12 11 0 1
..........................................................AAAATGAGGTAGTAGGTTGTATAGTTT............................................................................................................. 27 3 2 2.00 4 4 0 0
...............................................................GAGGTAGTAGGTTGTATAGTTAAA........................................................................................................... 24 2 2 2.00 4 4 0 0
..............................................................TGAGGTAGTACGTTGTATAGTTAT............................................................................................................ 24 2 1 2.00 2 1 1 0

Anti-sense strand reads

GGACACCACGAGTTGACACTAAGGAAAGTCGTAAACGGGACCTACAACAGAAGTGACACCCTACTCCATCATCCAACATATCAAAATCCCAGTGTGGGTGGTGACCCTCTATTGATATGTTAGATGACAGAAAGGATTCCACTACCTTTTCAGACGTAAGCACCTAGATCATCCTTTGGTTCTTGATTGACGTG
********************************************.((((((((.(((((.(((((((((((((((((((((.....(((...((((....)))).))))))))))))))))))))))))))))).))))).)))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
...............................................................................................................TTGATATGTTAGATG.................................................................... 15 0 8 0.63 5 3 2
..............................................................ACTCCATCATCCAAC..................................................................................................................... 15 0 8 0.38 3 3 0
..............................................................................................................ATTGATATGTTAGATGACGGAG.............................................................. 22 2 7 0.14 1 1 0
..............................................................................................................ATTGATATGTTAGAT..................................................................... 15 0 11 0.09 1 1 0

Generated: 04/30/2015 at 05:37 PM