ID:

mml-mir-934

 Coordinate:

chrX:135711881-135711963 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.0 -46.9

Sense Strand Reads

ATCTGGTCCAGCCTTTGATGGTGTGTGTCTGTATCCTGAGAACGAACTTGAGGAATAAGGCTTCTGTCTACTACTGGAGACACTGATAGTGTAAAACCCAGAGTCTTCGGTAATGGACGGGAGCCTTATTTCTATCACTCAGTGTTTTCATAGATAGAATTTGTTTCATTTTAGCCTCAAAAA

*************************************************.((((((((((((((((((((.((((((((((.(((...((.....)).))).)))))))))).))))))))))))))))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis		 SRR116841

prostate		 SRR116842

seminal vesicle		 SRR116839

testes		 SRR116844

epididymis		 SRR116845

epididymis		 SRR116843

cortex
....................................................................................................GAGTCTTCGGTAATGGACGGGA............................................................. 22 0 1 327.00 327 272 38 12 4 0 0 1
....................................................................................................GAGTCTTCGGTAATGGACGGGAT............................................................ 23 1 1 48.00 48 36 8 3 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGG.............................................................. 22 0 1 42.00 42 36 5 0 1 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGAA............................................................ 23 1 1 37.00 37 31 2 3 1 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGG.............................................................. 21 0 1 35.00 35 27 3 5 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGT............................................................. 23 1 1 29.00 29 24 4 0 1 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGT............................................................. 22 1 1 26.00 26 20 5 0 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGA............................................................. 23 0 1 26.00 26 25 0 0 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGA.............................................................. 22 1 1 25.00 25 21 1 2 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGG............................................................... 21 0 1 23.00 23 20 1 0 1 0 0 1
................................................................TGTCTACTACTGGAGACACTGA................................................................................................. 22 0 1 21.00 21 18 3 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGG............................................................... 20 0 1 20.00 20 18 2 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGT.............................................................. 22 1 1 14.00 14 12 1 0 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGTT............................................................ 24 2 1 7.00 7 6 1 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGA.............................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACTG.................................................................................................. 21 0 1 7.00 7 6 1 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGAATC.......................................................... 25 2 1 5.00 5 0 0 0 0 3 2 0
...................................................................................................AGAGTCTTCGGTAATGGACGGTA............................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACG................................................................ 19 0 1 5.00 5 5 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGTT............................................................ 23 2 1 4.00 4 3 0 0 1 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGAT............................................................ 24 1 1 4.00 4 4 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGAA............................................................. 22 1 1 4.00 4 3 1 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATTGACGGGA............................................................. 22 1 1 4.00 4 4 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACTGAA................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0 0
..................................................................................................AAGAGTCTTCGGTAATGGACGGGA............................................................. 24 1 1 3.00 3 3 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGTTT............................................................ 24 3 1 3.00 3 0 2 0 1 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGTT............................................................. 22 2 1 3.00 3 3 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGATTA.......................................................... 25 3 1 2.00 2 0 2 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACG................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGTACGGGA............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGTA............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGTA............................................................ 23 2 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACA................................................................ 19 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACTGGA............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGTT............................................................. 23 2 1 2.00 2 1 1 0 0 0 0 0
..............................................................TCTGTCTACTACTGGAGACACT................................................................................................... 22 0 1 2.00 2 1 1 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGAT............................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACTGAAA............................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................CTTCGGTAATGGACGGGA............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
................................................................TGTCTACTATTGGAGACACTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATTGACGG............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGTA............................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGCCACTGA................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGT.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGGCTTCGGTAATGGACGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGCCGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACG................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................GAGTCTTCGGTAGTGGACGGGAA............................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACTGGT............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGCGTCTTCGGTAATGGACGGG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................AAAGAGTCTTCGGTAATGGACGGT.............................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGTCTTCGGTAATGGACGGGAATC.......................................................... 25 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGTAA............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGA.................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGATT........................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................GAGTATTCGGTAATGGACGGGA............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATTGACGGA.............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGATT........................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGGCGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGTACGTGA............................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGT............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTCATGGACGGGAT............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGTGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGCCGG............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGATGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGC............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACT................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGTGAT............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGATA........................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGTACGG............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................AAGAGTCTTCGGTAATGGACGGGAT............................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACTG............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGTACGGGATA........................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACTGTAT............................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGAA............................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATTGACGGGTT............................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGACT........................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGTACGG............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGGACGGGAAA........................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGATA........................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGGACGGGTTT........................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGGGTCTTCGGTAATGGACGG............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCTGTAATGGACGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................TCTGTCTACTACTGGAGACA..................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATTGACGGGAT............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTCCGGTAATGGACGGGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGAGTCTTCGGTAATGAACGGG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................TTCGGTAATGGACGGGAGAGTC........................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GAGTCTTCGGTAATGTACGGTA............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TGTCTACTACTGGAGACACTGAATC.............................................................................................. 25 3 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................GAGTCTTCGGTAATGGACGTGT............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
................................................................TGTCCACTACTGGAGACCCTGA................................................................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
.........................................................................................................TTCGGTAATGGACGGGAATC.......................................................... 20 2 3 0.33 1 0 0 0 0 0 1 0
....................................................................................................GAGTCTTCAGTAATGGACGGAT............................................................. 22 3 7 0.14 1 1 0 0 0 0 0 0
.........................TATCTGTATCCTGAGTACGATC........................................................................................................................................ 22 3 8 0.13 1 0 0 0 0 1 0 0

Anti-sense strand reads

TAGACCAGGTCGGAAACTACCACACACAGACATAGGACTCTTGCTTGAACTCCTTATTCCGAAGACAGATGATGACCTCTGTGACTATCACATTTTGGGTCTCAGAAGCCATTACCTGCCCTCGGAATAAAGATAGTGAGTCACAAAAGTATCTATCTTAAACAAAGTAAAATCGGAGTTTTT

**********************************************.((((((((((((((((((((.((((((((((.(((...((.....)).))).)))))))))).))))))))))))))))))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:35 PM