ID:

mml-mir-891a

Coordinate:

chrX:145244936-145245014 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-26.5 -26.5 -26.3

Sense Strand Reads

TATGTAGCTTGTTTTTTCGTAGGTTCCGAAAGAGTCTACAAATGTTATCTCCTTAATCCTTGCAACTTACCTGAGTCATTGATTCAGTAAAACATTCAATGGCACATGTTTGTTGTTAGGGTCAAAAGAGAGAATCCATCTAAAGGCCTCATGGACATTGCAAACCATGTAAGTCATCA

*********************************************..((((....(((((.(((((..((.((.((((((((.............)))))))).)).))..))))).))))).....)))).***********************************************
Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis
SRR116845

epididymis
SRR116844

epididymis
SRR116841

prostate
SRR116842

seminal vesicle
............................................................TGCAACTTACCTGAGTCATTGAATC.............................................................................................. 25 1 1 602.00 602 0 422 180 0 0
............................................................TGCAACTTACCTGAGTCATTG.................................................................................................. 21 0 1 535.00 535 506 0 0 15 14
............................................................TGCAACTTACCTGAGTCATTGA................................................................................................. 22 0 1 202.00 202 184 3 0 8 7
............................................................TGCAACTTACCTGAGTCATTGATC............................................................................................... 24 1 1 192.00 192 0 125 67 0 0
............................................................TGCAACTTACCTGAGTCATT................................................................................................... 20 0 1 109.00 109 106 0 0 2 1
............................................................TGCAACTTACCTGAGTCA..................................................................................................... 18 0 1 30.00 30 28 0 0 0 2
............................................................TGCAACTTACCTGAGTCATTGAA................................................................................................ 23 1 1 25.00 25 21 3 1 0 0
.................................................................................................AATGGCACATGTTTGTTGTTAGATC......................................................... 25 3 1 17.00 17 0 12 5 0 0
.................................................................................................AATGGCACATGTTTGTTGTT.............................................................. 20 0 1 14.00 14 12 0 0 2 0
............................................................TGCAACTTACCTGAGTCATTT.................................................................................................. 21 1 1 14.00 14 14 0 0 0 0
............................................................TGCAACTTACCTGAGTCAT.................................................................................................... 19 0 1 14.00 14 14 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGAAA............................................................................................... 24 2 1 13.00 13 13 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTA.................................................................................................. 21 1 1 13.00 13 13 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGTATC.............................................................................................. 25 2 1 12.00 12 0 8 4 0 0
.................................................................................................AATGGCACATGTTTGTTGTTATC........................................................... 23 2 3 7.33 22 0 18 4 0 0
............................................................TGCAACTTACCTGAGTCATTATC................................................................................................ 23 3 3 7.00 21 0 6 15 0 0
.................................................................................................AATGGCACATGTTTGTTGTTAG............................................................ 22 0 1 6.00 6 4 0 0 2 0
............................................................TGCAACTTACCTGAGTCATTGACTC.............................................................................................. 25 1 1 6.00 6 0 5 1 0 0
...........................................................ATGCAACTTACCTGAGTCATTG.................................................................................................. 22 1 1 5.00 5 5 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGATATC............................................................................................. 26 3 1 5.00 5 0 1 4 0 0
..........................................................AATGCAACTTACCTGAGTCATTG.................................................................................................. 23 2 1 5.00 5 4 0 0 1 0
............................................................TGCAACTTACCTGAGTCATTGGATC.............................................................................................. 25 2 1 4.00 4 0 3 1 0 0
............................................................TGCAACTTACCTGAGTCATTAA................................................................................................. 22 1 1 4.00 4 3 0 0 0 1
............................................................TGCAACTTACCTGATTCATTGAATC.............................................................................................. 25 2 1 4.00 4 0 3 1 0 0
............................................................TGCAACTTACCTGAGTCATTTA................................................................................................. 22 1 1 4.00 4 4 0 0 0 0
............................................................TTCAACTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 4.00 4 0 1 3 0 0
..........................................................AATGCAACTTACCTGAGTCATTGA................................................................................................. 24 2 1 3.00 3 3 0 0 0 0
............................................................TGTAACTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 3.00 3 0 3 0 0 0
............................................................TGCAACTTACCTGAGTCATTGCATC.............................................................................................. 25 2 1 3.00 3 0 2 1 0 0
............................................................TGCAACTTACTTGAGTCATTGAATC.............................................................................................. 25 2 1 3.00 3 0 3 0 0 0
............................................................TGCAACTTACCTGATTCATTG.................................................................................................. 21 1 1 3.00 3 3 0 0 0 0
............................................................TGCAACTTACCTGACTCATTGTATC.............................................................................................. 25 3 1 3.00 3 0 3 0 0 0
............................................................TGCAACTTATCTGAGTCATTGAATC.............................................................................................. 25 2 1 3.00 3 0 0 3 0 0
............................................................TGCACCTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 3.00 3 0 2 1 0 0
............................................................TGCAACTTACCTGAGCCATTGAATC.............................................................................................. 25 2 1 3.00 3 0 1 2 0 0
............................................................TGCAACTTACCTGATTCATTGATC............................................................................................... 24 2 2 2.50 5 0 5 0 0 0
............................................................TGCAACTTACCTGAGTCATTGATTC.............................................................................................. 25 0 1 2.00 2 0 2 0 0 0
............................................................TGCAACTTACCTTAGTCATTGAATC.............................................................................................. 25 2 1 2.00 2 0 2 0 0 0
.................................................................................................AATGGCACATGTTTGTTGT............................................................... 19 0 1 2.00 2 2 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGCTC............................................................................................... 24 2 1 2.00 2 0 2 0 0 0
............................................................TGCAACTTACCTGAGTCATTGTC................................................................................................ 23 2 1 2.00 2 0 1 1 0 0
............................................................TGCATCTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 2.00 2 0 0 2 0 0
............................................................CGCAACTTACCTGAGTCATTG.................................................................................................. 21 1 1 2.00 2 2 0 0 0 0
............................................................TGCAACTTACCTGAGCCATTGATC............................................................................................... 24 2 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGAGTCATTGATAGAC............................................................................................ 27 3 1 1.00 1 1 0 0 0 0
............................................................TCCAACTTACCTGAGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTAT................................................................................................. 22 2 1 1.00 1 0 1 0 0 0
..................................................................................................ATGGCACATGTTTGTTGTT.............................................................. 19 0 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCCTTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGGAACTTACCTGAGTCATTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACGTGCGTCATTGAATC.............................................................................................. 25 3 1 1.00 1 0 0 1 0 0
..................................................................................................ATGGCACATGTTTGTTGTTAGTATC........................................................ 25 2 2 1.00 2 0 2 0 0 0
............................................................TGCAACTTTCCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCATTGTTC............................................................................................... 24 2 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTATCTGAGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGAT................................................................................................ 23 0 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTTAGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGC................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGT....................................................................................................... 16 0 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGACATTGAATC.............................................................................................. 25 2 1 1.00 1 0 0 1 0 0
..............................................................CAACTTACCTGAGTCATTGATC............................................................................................... 22 1 1 1.00 1 0 1 0 0 0
............................................................TGCACCTTTCCTGAGTCATTGAATC.............................................................................................. 25 3 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGAGTCGTTGATC............................................................................................... 24 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGTGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAATTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGAGTAATTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCACTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTCACCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
................................................................ACTTACCTGAGTCATTGAATC.............................................................................................. 21 1 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCATTGAAAA.............................................................................................. 25 3 1 1.00 1 1 0 0 0 0
.................................................................................................AATGGCACATGTTTGTTGTTAGT........................................................... 23 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCCTTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCATTGTA................................................................................................ 23 2 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATC................................................................................................... 20 1 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGAGTCAATG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAATTTACCTGAGTCACTGAATC.............................................................................................. 25 3 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGCGTCATTGATC............................................................................................... 24 2 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGCGTCATT................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTAATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATA................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGT................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
............................................................TGCAAGTTACCTGAGTCATTGA................................................................................................. 22 1 1 1.00 1 0 0 0 1 0
............................................................TGCAACTTACCTGAGTCATTGAGTC.............................................................................................. 25 1 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTC...................................................................................................... 17 0 1 1.00 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTAATC............................................................................................... 24 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTAATTGATC............................................................................................... 24 2 1 1.00 1 0 0 1 0 0
............................................................TGCAACTTACCTGAGTCCTTGATC............................................................................................... 24 2 1 1.00 1 0 0 1 0 0
.................................................................................................AATGGCACATGTTTGTTGTTA............................................................. 21 0 1 1.00 1 1 0 0 0 0
............................................................TGCAAATTACCTGAGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................TGCAACGTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTATCTGAGTCATTGAT................................................................................................ 23 1 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCAATC.................................................................................................. 21 2 4 1.00 4 0 3 1 0 0
............................................................TGCAACCTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCAA.................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................................................................ATGGCACATGTTTGTTGTTAGA........................................................... 22 1 1 1.00 1 1 0 0 0 0
............................................................GGCAACTTACCTGAGTCATTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
............................................................TTCAACTTACCTGAGTCATTG.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
............................................................AGCAACTTACCTGAGTCATTGAATC.............................................................................................. 25 2 1 1.00 1 0 1 0 0 0
............................................................TACAACTTACCTGAGTCATTGATC............................................................................................... 24 2 1 1.00 1 0 1 0 0 0
............................................................TGCAACTTACCCGAGTCATTGA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
.................................................................................................AATGGCACATGTTTGTTGTTAATC.......................................................... 24 3 4 0.75 3 0 3 0 0 0
............................................................TGCAACTTATCTGAGTCATTAATC............................................................................................... 24 3 3 0.67 2 0 0 2 0 0
..................................................................................................ATGGCACATGTTTGTTGTTAGATC......................................................... 24 3 3 0.67 2 0 1 1 0 0
.................................................................................................AATGGCACATGTTTGTTGTTAGTATC........................................................ 26 2 2 0.50 1 0 0 1 0 0
.................................................................................................AATGGCACATGTTTGTTGTTT............................................................. 21 1 2 0.50 1 1 0 0 0 0
............................................................TGCAACTTACCTGAG........................................................................................................ 15 0 6 0.50 3 1 0 0 0 2
............................................................TGCAACTTACCTGAGACATTG.................................................................................................. 21 1 2 0.50 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTGAAGA.............................................................................................. 25 3 2 0.50 1 1 0 0 0 0
..................................................................................................ATGGCACATGTTTGTTGTTAGAATC........................................................ 25 2 2 0.50 1 0 1 0 0 0
............................................................TGCAACGTACCTGAGCCATTGAATC.............................................................................................. 25 3 2 0.50 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCATTTAA................................................................................................ 23 2 2 0.50 1 1 0 0 0 0
............................................................TGCAACTTCCCTGAGTCATT................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
.................................................................................................AATGGCACATGTTTGTTTTT.............................................................. 20 1 5 0.40 2 2 0 0 0 0
..................................................................TTACCTGAGTCATTGATC............................................................................................... 18 1 6 0.33 2 0 0 2 0 0
.................................................................................................AATGGCACATGTTTGTTTTTAT............................................................ 22 2 6 0.33 2 2 0 0 0 0
...................................................................TACCTGAGTCATTGAATC.............................................................................................. 18 1 3 0.33 1 0 1 0 0 0
...............................................................AACTTACCTGAGTCATTA.................................................................................................. 18 1 3 0.33 1 0 1 0 0 0
............................................................TGCAACTTACCTGAGTCATAA.................................................................................................. 21 2 4 0.25 1 0 0 0 1 0
...........................................................TTGCAACTAACTTGAGTCATT................................................................................................... 21 2 4 0.25 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATATC................................................................................................. 22 3 9 0.22 2 0 1 1 0 0
............................................................TGCAACTTACCTTATTCATTG.................................................................................................. 21 2 5 0.20 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCATTCTC................................................................................................ 23 3 6 0.17 1 0 0 1 0 0
............................................................TGCAACTTACCTGATTCATTT.................................................................................................. 21 2 10 0.10 1 1 0 0 0 0
............................................................TGCAACTTGCCTGAGTCA..................................................................................................... 18 1 13 0.08 1 1 0 0 0 0
............................................................TGCAACTTACCTGAGTCAAA................................................................................................... 20 2 16 0.06 1 1 0 0 0 0
............................................................TGCAACTTACCTGAATC...................................................................................................... 17 1 20 0.05 1 0 0 1 0 0
............................................................TGCAACTTACCTTAGTCAATC.................................................................................................. 21 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ATACATCGAACAAAAAAGCATCCAAGGCTTTCTCAGATGTTTACAATAGAGGAATTAGGAACGTTGAATGGACTCAGTAACTAAGTCATTTTGTAAGTTACCGTGTACAAACAACAATCCCAGTTTTCTCTCTTAGGTAGATTTCCGGAGTACCTGTAACGTTTGGTACATTCAGTAGT

***********************************************..((((....(((((.(((((..((.((.((((((((.............)))))))).)).))..))))).))))).....)))).*********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:36 PM