ID:

mml-mir-767

Coordinate:

chrX:152014526-152014635 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.8

Sense Strand Reads

ATCTGGGCATATTCCTCATTGCGTTATTCACTCTTGTTTCACACCTACCTGCTTTTATATTGTAGGTTTTTGCTCATGCACCATGGTTGTCTGAGCATGCAGCATGCTTGTCTGCTCATACCCCATGGTTTCTGAGCAGGAATCTTCATTGTCTACTGCTTTACAGGGAAATAGTGTTTTTTATGCATCATGTATATCAGTTTGGTATTT

***********************************(((((...(((....((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)).....))))))))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
SRR116841

prostate
SRR116839

testes
SRR116842

seminal vesicle
SRR116845

epididymis
SRR116840

epididymis
............................................................................TGCACCATGGTTGTCTGAGCAT................................................................................................................ 22 0 1 211.00 211 199 8 1 2 0 1
............................................................................TGCACCATGGTTGTCTGAGCA................................................................................................................. 21 0 1 15.00 15 12 2 1 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATA............................................................................................................... 23 1 1 13.00 13 11 2 0 0 0 0
............................................................................TGCACCATGGTTGTCTTAGCAT................................................................................................................ 22 1 1 11.00 11 9 1 1 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATT............................................................................................................... 23 1 1 9.00 9 8 1 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCAA................................................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0
............................................................................TGCACCATGGTTGTCTTAGCA................................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGATCATA............................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGATCAT................................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATG............................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
...........................................................................ATGCACCATGGTTGTCTGAGCAT................................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0
............................................................................TGCACCATGGTCGTCTGAGCAT................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................TGCACCATGGTTGCCTGAGCAT................................................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCCT................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................CGCACCATGGTTGTCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TACACCATGGTTGTCTGAGCATA............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGGCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGACCA................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................TTCACCATGGTTGTCTTAGCAT................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................CGCACCATGGTTGTCTTAGCAT................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................ATGCACCATGGTTGTCTGAGCA................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................................ATGCACCATGGTTGTCTGAGA.................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATGA.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCT................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATAGTTGTCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTAGTCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGCTGTCTTAGCAT................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................AATGCACCATGGTTGTCTTAGCAT................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTTAGCATT............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGGAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCCTGGTTGTCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................GCACCATGGTTGTCTGAGCAA................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................TCTGCTCATACCCCATGGTTTCATC........................................................................... 25 3 1 1.00 1 0 0 0 0 1 0
............................................................................TGCACCATGGTTGTCTTAGCATA............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTTATCAT................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATGT.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCTTGGTTGTCTGAGCATT............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATGCATC........................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0
............................................................................TGCACCATGGTTGTCTTAGCAA................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCATGC.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTTAG................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTTTCTGAGCAT................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGGTGTCTGAGCATA............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................TGCACCATGGTTGTCTGAGCAAA............................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0

Anti-sense strand reads

TAGACCCGTATAAGGAGTAACGCAATAAGTGAGAACAAAGTGTGGATGGACGAAAATATAACATCCAAAAACGAGTACGTGGTACCAACAGACTCGTACGTCGTACGAACAGACGAGTATGGGGTACCAAAGACTCGTCCTTAGAAGTAACAGATGACGAAATGTCCCTTTATCACAAAAAATACGTAGTACATATAGTCAAACCATAAA

***********************************(((((...(((....((....(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).))).....)).....))))))))...***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:37 PM