ID:

mml-mir-7205

 Coordinate:

chr10:88830741-88830800 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-41.0 -41.0 -41.0

Sense Strand Reads

ACCTGGCTTAAGTGGGTGGTTTTGAGTGGTTGACTTTGCAGGCCCGGGGCTCGAGGGGCGTCGGGGCCAGGGAAGCTTTCAATACCGCTCTCTGACACACGCCCTCCTGCTCTGGGACCCGCCACTGTGCACGTCTCCGGCAGGGAGGGTCTGAGCAGCG

***********************************..((.((((((((((..(((((..(((((((...((.............))...))))))).....)))))..)))))))).)).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116845

epididymis		 SRR116841

prostate		 SRR116840

epididymis		 SRR116844

epididymis		 SRR116842

seminal vesicle
........................................................................................TCTCTGACACACGCCCTCCTGC.................................................. 22 0 1 22.00 22 21 0 1 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGT.................................................. 22 1 1 7.00 7 7 0 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCAA................................................ 24 2 1 3.00 3 3 0 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCATC............................................... 25 3 1 3.00 3 0 1 0 0 2 0
..................................................TCGAGGGGCGTCGGGGCCAGGGAAGCATC................................................................................. 29 2 1 2.00 2 0 2 0 0 0 0
..................................................TCGAGGGGCGTCGGGGCCAGGGATC..................................................................................... 25 2 1 2.00 2 0 2 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGA.................................................. 22 1 1 2.00 2 0 0 1 1 0 0
..................................................TCGAGGGGCGTCGGGGCCAGGGA....................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................................TCGAGGGGCGTCGGGGCCAGGGAAGC.................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..................................................TCGAGGGGCGTCGGGGCCAGGGAATC.................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCATA............................................... 25 3 1 1.00 1 0 0 1 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCAG................................................ 24 2 1 1.00 1 0 0 1 0 0 0
..................................................TCGAGGGGCGTTGGGGCCAGGGA....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TCGAGGGGCGTCGGGGCCAGGGAAG..................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0
........................................................................................TCTCTGACACACGCCCTCTTGC.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCA................................................. 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGCT................................................. 23 0 1 1.00 1 0 0 0 1 0 0
........................................................................................TCTCTGACACACGCCCTCCTTT.................................................. 22 2 2 0.50 1 0 0 1 0 0 0
........................................................................................TCTCTGACACACGCCCTCCTGAAA................................................ 24 3 3 0.33 1 0 0 0 0 0 1
........................................................................................TCTCTGACACACGCCCTCCAA................................................... 21 2 4 0.25 1 0 0 0 1 0 0
......................................................................................................................CCGCCAATGTGCACGTCC........................ 18 2 18 0.06 1 0 0 0 0 1 0

Anti-sense strand reads

TGGACCGAATTCACCCACCAAAACTCACCAACTGAAACGTCCGGGCCCCGAGCTCCCCGCAGCCCCGGTCCCTTCGAAAGTTATGGCGAGAGACTGTGTGCGGGAGGACGAGACCCTGGGCGGTGACACGTGCAGAGGCCGTCCCTCCCAGACTCGTCGC

***********************************..((.((((((((((..(((((..(((((((...((.............))...))))))).....)))))..)))))))).)).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:06 PM