ID:

mml-mir-7195

 Coordinate:

chr7:140813643-140813704 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CAGCCTCCAGGAGAGCAAGCCAGCCCTGGGAGTGAGTGGGAGGAGAAGAGGCAGGGGGAAGGGGATGCTTGCATTGACGTCTCTCCTGCTATCCTCCCCTCTCCCCCTGCAGAGCCCAATTGTGACCCAGTTCTTCCCCTCTGTGATGCTCTGGGGCTTCAC

***********************************.((((..........(((((((((((((((.....(((..((......)).))).....)))))).)))))))))....)))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116845

epididymis		 SRR116844

epididymis
.........................................................................................TATCCTCCCCTCTCCCCCTGCAGATC............................................... 26 1 1 2.00 2 0 2 0
........................................................................................CTATCCTCCCCTCTCCCCCTGCCGAA................................................ 26 2 1 1.00 1 1 0 0
.........................................................................................TATCCTCCCCTCTCCCCCTGCAGA................................................. 24 0 1 1.00 1 1 0 0
........................................................................................CTATCCTCCCCTCTCCCCCTTCAGT................................................. 25 2 2 0.50 1 1 0 0
......................................................................................................CCCCCTGCAGTGCCCAATC......................................... 19 2 20 0.05 1 0 0 1

Anti-sense strand reads

GTCGGAGGTCCTCTCGTTCGGTCGGGACCCTCACTCACCCTCCTCTTCTCCGTCCCCCTTCCCCTACGAACGTAACTGCAGAGAGGACGATAGGAGGGGAGAGGGGGACGTCTCGGGTTAACACTGGGTCAAGAAGGGGAGACACTACGAGACCCCGAAGTG

***********************************.((((..........(((((((((((((((.....(((..((......)).))).....)))))).)))))))))....)))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:27 PM