ID:

mml-mir-7182

Coordinate:

chr2:116114605-116114666 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

AATACAGAACCTTGATTCAGTTGCATGAGGAATAAGAGATTCAGTTGGGCATCGCAGTTTTAGAATCCATGCCTTTGGAATATAAAAAGCATGGATTTTAAAACTGGGATGCCCAACTGATTCTATGACGTTCAAAATGTGTCACCTCAATGAAAGAGAAAA

***********************************.(((.(((((((((((((.((((((((((((((((((.(((........))).)))))))))))))))))).))))))))))))).)))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116839

testes
SRR116840

epididymis
..........................................................................................ATGGATTTTAAAACTGGGATGCAT................................................ 24 2 1 1.00 1 1 0
..........................................................................................ATGGATTTTAAAACTGGGATGCA................................................. 23 1 1 1.00 1 0 1
..................................................ATCGCAGTTTTATAATCCATGT.......................................................................................... 22 2 2 0.50 1 1 0

Anti-sense strand reads

TTATGTCTTGGAACTAAGTCAACGTACTCCTTATTCTCTAAGTCAACCCGTAGCGTCAAAATCTTAGGTACGGAAACCTTATATTTTTCGTACCTAAAATTTTGACCCTACGGGTTGACTAAGATACTGCAAGTTTTACACAGTGGAGTTACTTTCTCTTTT

***********************************.(((.(((((((((((((.((((((((((((((((((.(((........))).)))))))))))))))))).))))))))))))).)))...***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:19 PM