ID:

mml-mir-7175

 Coordinate:

chr19:41473027-41473082 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-16.4

Sense Strand Reads

TATGACTCCATTCTGCAGAAGGCAAGCTTTAAGGAGAGGGAGAAAGTTCTAGGACATGTGGGTTAGGCAGAAGTAGAGGATCCTGCAACTATGACTGAGGGACTGGAATGCAGAGGGCCCCTGTTCTCATTATTAAGTGGAATAGCAAATATAGGT

***********************************..(((.....(((((((........(((((...((..((((......))))..)).)))))......)))))))........))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116839

testes		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116843

cortex		 SRR116844

epididymis
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 0 1 5166.00 5166 4059 568 301 193 45 0
TATGACTCCATTCTGCAGAAGGCAAGCTT............................................................................................................................... 29 0 1 339.00 339 307 20 5 5 2 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGC...................................... 29 0 1 310.00 310 250 34 14 10 2 0
TATGACTCCATTCTGCAGAAGGCAAGCTTT.............................................................................................................................. 30 0 1 303.00 303 246 33 13 10 1 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACTA................................................................. 28 0 1 225.00 225 207 11 1 5 1 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAGTA................................................................................. 29 0 1 157.00 157 128 13 12 4 0 0
...........................TTTAAGGAGAGGGAGAAAGTTCTAGGACA.................................................................................................... 29 0 1 139.00 139 91 22 17 8 1 0
..TGACTCCATTCTGCAGAAGGCAAGCTTTA............................................................................................................................. 29 0 1 132.00 132 117 8 5 1 1 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTA................................................................................. 26 0 1 116.00 116 95 11 5 4 1 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGAA.............................................................................. 29 1 1 110.00 110 71 22 10 4 3 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGTA................................................................................. 28 0 1 110.00 110 100 3 6 1 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACTAT................................................................ 29 0 1 106.00 106 90 8 1 6 1 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAG................................................................................ 27 0 1 105.00 105 89 12 3 0 1 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAGT.................................................................................. 28 0 1 99.00 99 90 4 5 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGG....................................... 28 0 1 95.00 95 85 3 1 6 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGT............................................................................... 28 1 1 92.00 92 74 10 4 0 4 0
.................................................TAGGACATGTGGGTTAGGCAGAAGT.................................................................................. 25 0 1 83.00 83 74 2 3 4 0 0
........................................AGAAAGTTCTAGGACATGTGGGTTAGGCA....................................................................................... 29 0 1 71.00 71 59 8 0 4 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGAG.............................................................................. 29 0 1 49.00 49 37 3 7 2 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGCCCC................................... 30 0 1 44.00 44 40 2 1 0 1 0
..TGACTCCATTCTGCAGAAGGCAAGCTTT.............................................................................................................................. 28 0 1 43.00 43 41 0 0 2 0 0
...................................................................................TGCAACTATGACTGAGGGACTGGAATGCA............................................ 29 0 1 43.00 43 37 4 1 1 0 0
.................................................TAGGACATGTGGGTTAGGCAGAA.................................................................................... 23 0 1 42.00 42 37 3 0 2 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGA.......................................... 25 0 1 41.00 41 39 0 1 1 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGG........................................ 27 0 1 40.00 40 34 5 0 0 1 0
TATGACTCCATTCTGCAGAAGGCAAGCT................................................................................................................................ 28 0 1 38.00 38 33 4 1 0 0 0
.....................................................................GAAGTAGAGGATCCTGCAACTATGACTGA.......................................................... 29 0 1 35.00 35 30 3 1 1 0 0
.........................................GAAAGTTCTAGGACATGTGGGTTAGGCA....................................................................................... 28 0 1 35.00 35 33 2 0 0 0 0
......................................................................................AACTATGACTGAGGGACTGGAATGCAGA.......................................... 28 0 1 28.00 28 26 2 0 0 0 0
.................................................TAGGACATGTGGGTTATGCAGAAGTAGA............................................................................... 28 1 1 25.00 25 20 3 0 2 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAAC................................................................... 26 0 1 25.00 25 21 4 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGA..................................................................................... 22 0 1 24.00 24 17 4 0 3 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGCCC.................................... 29 0 1 23.00 23 21 0 1 1 0 0
.................................................TAGGATATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 22.00 22 22 0 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 30 0 1 21.00 21 13 6 0 1 1 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGCC..................................... 28 0 1 21.00 21 19 2 0 0 0 0
.................................................TAGGACATGTCGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 19.00 19 19 0 0 0 0 0
TATGACTCCATTCTGCAGAAGGCAAGC................................................................................................................................. 27 0 1 18.00 18 17 1 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGT...................................... 29 1 1 18.00 18 14 0 3 1 0 0
..........................................................TGGGTTAGGCAGAAGTAGAGGATCCTGCA..................................................................... 29 0 1 18.00 18 13 4 0 0 1 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGC...................................... 27 0 1 17.00 17 16 0 1 0 0 0
.................................................TAGGACATGTAGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 17.00 17 17 0 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGTAG................................................................................ 29 0 1 17.00 17 11 3 0 3 0 0
.................................................TAGGAGATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 16.00 16 16 0 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGT....................................... 28 1 1 15.00 15 14 1 0 0 0 0
.................................................TAGGACATGTGGGTTAGTCAGAAGTAGA............................................................................... 28 1 1 15.00 15 12 2 0 1 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAA.................................................................... 25 0 1 15.00 15 10 3 2 0 0 0
..TGACTCCATTCTGCAGAAGGCAAGCTT............................................................................................................................... 27 0 1 15.00 15 13 2 0 0 0 0
...........................TTTAAGGAGAGGGAGAAAGTTCTAGGAC..................................................................................................... 28 0 1 14.00 14 13 0 1 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGTAGT............................................................................... 30 1 1 14.00 14 6 1 5 1 1 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACT.................................................................. 27 0 1 14.00 14 13 1 0 0 0 0
.........................................GAAAGTTCTAGGACATGTGGGTTAGGCAG...................................................................................... 29 0 1 13.00 13 10 1 2 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGAT.............................................................................. 29 1 1 13.00 13 8 1 2 1 1 0
.......................................................................................................TGGAATGCAGAGGGCCCCTGTTCTCATTA........................ 29 0 1 11.00 11 10 1 0 0 0 0
......................................................................................AACTATGACTGAGGGACTGGAATGCAGAG......................................... 29 0 1 11.00 11 10 0 0 1 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAG................................................................................... 24 0 1 11.00 11 10 0 0 0 1 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGG........................................ 25 0 1 11.00 11 6 4 0 1 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAG......................................... 26 0 1 11.00 11 10 0 0 1 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGAAA............................................................................. 30 2 1 11.00 11 8 3 0 0 0 0
.............................TAAGGAGAGGGAGAAAGTTCTAGGACA.................................................................................................... 27 0 1 11.00 11 10 0 0 1 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGGAGA............................................................................... 28 1 1 10.00 10 9 1 0 0 0 0
.............................TAAGGAGAGGGAGAAAGTTCTAGGAC..................................................................................................... 26 0 1 10.00 10 8 2 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGAAGA............................................................................... 28 1 1 10.00 10 8 2 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGT.................................................................................. 27 0 1 10.00 10 8 2 0 0 0 0
..TGACTCCATTCTGCAGAAGGCAAGCTTTAA............................................................................................................................ 30 0 1 10.00 10 7 2 1 0 0 0
..TGACTCCATTCTGCAGAAGGCAAGCTTTT............................................................................................................................. 29 1 1 10.00 10 10 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAATTAGA............................................................................... 28 1 1 10.00 10 10 0 0 0 0 0
TATGACTCCATTCTTCAGAAGGCAAGCTT............................................................................................................................... 29 1 1 10.00 10 10 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGA..................................................................................... 25 0 1 9.00 9 8 0 0 1 0 0
.................................................TAGGACATGTGGGTTAGGCA....................................................................................... 20 0 1 9.00 9 4 5 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACTATG............................................................... 30 0 1 9.00 9 4 2 1 2 0 0
.......................................GAGAAAGTTCTAGGACATGTGGGTTAGGC........................................................................................ 29 0 1 8.00 8 5 0 2 1 0 0
................................................................................TCCTGCAACTATGACTGAGGGACTGGAAT............................................... 29 0 1 8.00 8 7 1 0 0 0 0
..............................................................................................................................TCATTATTAAGTGGAATAGCAAATATAGGT 30 0 1 8.00 8 7 1 0 0 0 0
.................................................TAGGACATGTGGGGTAGGCAGAAGTAGA............................................................................... 28 1 1 8.00 8 1 4 1 0 2 0
.................................................TAGCACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 8.00 8 8 0 0 0 0 0
.................................................TAGAACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 7.00 7 7 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCA..................................................................... 24 0 1 7.00 7 6 1 0 0 0 0
.............................TAAGGAGAGGGAGAAAGTTCTAGGACAT................................................................................................... 28 0 1 7.00 7 6 1 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGCC..................................... 30 0 1 7.00 7 6 0 1 0 0 0
.............................TAAGGAGAGGGAGAAAGTTCTAGGACATG.................................................................................................. 29 0 1 7.00 7 5 1 0 1 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGA.......................................... 23 0 1 7.00 7 6 1 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTATA............................................................................... 28 1 1 7.00 7 7 0 0 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGAGAG...................................................................................................................... 29 0 1 7.00 7 4 1 2 0 0 0
TATGACTCCATTCTTCAGAAGGCAAGCTTT.............................................................................................................................. 30 1 1 7.00 7 6 1 0 0 0 0
.................................................TAGTACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 7.00 7 6 1 0 0 0 0
................................................CTAGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 29 0 1 7.00 7 5 1 0 1 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGT........................................ 27 1 1 6.00 6 5 1 0 0 0 0
.................................................TAGGACATGTTGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 6.00 6 5 1 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCATAAGTAGA............................................................................... 28 1 1 6.00 6 5 1 0 0 0 0
................................................................................TCCTGCAACTATGACTGAGGGACTGGAA................................................ 28 0 1 6.00 6 6 0 0 0 0 0
..........................................................TGGGTTAGGCAGAAGTAGAGGATCCTGC...................................................................... 28 0 1 6.00 6 5 0 1 0 0 0
.........................................GAAAGTTCTAGGACATGTGGGTTAGGCAGA..................................................................................... 30 0 1 6.00 6 5 0 1 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGAGT............................................................................. 30 1 1 5.00 5 3 2 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGG....................................... 26 0 1 5.00 5 4 0 1 0 0 0
..........................................AAAGTTCTAGGACATGTGGGTTAGGCAGA..................................................................................... 29 0 1 5.00 5 4 0 0 0 1 0
.................................................TAGGACATGTGGGTTAGGCAGCAGTAGA............................................................................... 28 1 1 5.00 5 5 0 0 0 0 0
................................................................AGGCAGAAGTAGAGGATCCTGCAACTA................................................................. 27 0 1 5.00 5 4 0 1 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGA...................................... 29 1 1 5.00 5 4 0 1 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTG....................................................................... 22 0 1 5.00 5 4 1 0 0 0 0
...................................................................CAGAAGTAGAGGATCCTGCAACTATGACT............................................................ 29 0 1 5.00 5 4 0 0 1 0 0
.....................................................................GAAGTAGAGGATCCTGCAACTATGAC............................................................. 26 0 1 5.00 5 4 0 0 1 0 0
.................................................TAGGAAATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 5.00 5 5 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCT........................................................................ 21 0 1 5.00 5 3 2 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGTGC...................................... 29 1 1 4.00 4 2 1 0 1 0 0
............................................................................................................................TCTCATTATTAAGTGGAATAGCAAATATA... 29 0 1 4.00 4 4 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCCGAAGTAGA............................................................................... 28 1 1 4.00 4 3 1 0 0 0 0
.....................................................................................CAACTATGACTGAGGGACTGGAATGCAGA.......................................... 29 0 1 4.00 4 4 0 0 0 0 0
.................................................TAGGACATGAGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 4.00 4 4 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAT................................................................................ 27 1 1 4.00 4 3 0 0 1 0 0
...........................................AAGTTCTAGGACATGTGGGTTAGGCAGAA.................................................................................... 29 0 1 4.00 4 3 0 1 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGAGA....................................................................................................................... 28 0 1 4.00 4 3 1 0 0 0 0
..............................................TTCTAGGACATGTGGGTTATGCAGAAGTA................................................................................. 29 1 1 4.00 4 3 1 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGG............................................................................... 28 1 1 4.00 4 3 1 0 0 0 0
.....................................................................GAAGTAGAGGATCCTGCAACTATGACT............................................................ 27 0 1 4.00 4 4 0 0 0 0 0
.................................................TGGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 4.00 4 4 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTTGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
TATGACTCCATTCTGCAGAAGGCAAGCTA............................................................................................................................... 29 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAA................................................................................ 27 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGGAGAAGTAGA............................................................................... 28 1 1 3.00 3 1 0 1 1 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGAA....................................... 28 2 1 3.00 3 1 1 1 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACTT................................................................. 28 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTTCAACTA................................................................. 28 1 1 3.00 3 2 1 0 0 0 0
........................................AGAAAGTTCTAGGACATGTGGGTTAGGC........................................................................................ 28 0 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATTTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
......................................................................AAGTAGAGGATCCTGCAACTATGACTGA.......................................................... 28 0 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGCTAGGCAGAAGTAGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
................................................................AGGCAGAAGTAGAGGATCCTGCAAC................................................................... 25 0 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGCAGA............................................................................... 28 1 1 3.00 3 1 2 0 0 0 0
............................................AGTTCTAGGACATGTGGGTTAGGCA....................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGCCCT................................... 30 1 1 3.00 3 2 1 0 0 0 0
..............................................TTCTACGACATGTGGGTTAGGCAGAAGTA................................................................................. 29 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGC...................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
..............................................TTCTACGACATGTGGGTTAGGCAGAAGT.................................................................................. 28 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGGAGTAGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
...........................TTTAAGGAGAGGGAGAAAGTTCTAGGACAT................................................................................................... 30 0 1 3.00 3 2 1 0 0 0 0
..........TTCTGCAGAAGGCAAGCTTTAAGGAGAGG..................................................................................................................... 29 0 1 3.00 3 1 2 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAG................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0
...................................................................................TGCAACTATGACTGAGGGAC..................................................... 20 0 1 3.00 3 3 0 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGA....................................... 28 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGT........................................ 25 1 1 3.00 3 3 0 0 0 0 0
...............................................................TAGGCCGAAGTAGAGGATCCTGCAACTA................................................................. 28 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAA................................................................................... 24 1 1 3.00 3 1 2 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAA.................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0
TATGAGTCCATTCTGCAGAAGGCAAGCTT............................................................................................................................... 29 1 1 3.00 3 3 0 0 0 0 0
..............................................................TTAGGCAGAAGTAGAGGATCCTGCAACTA................................................................. 29 0 1 3.00 3 1 1 1 0 0 0
TATGACTCCATTCTGCAGAAGGC..................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
............................................................................................................................TCTCATTATTAAGTGGAATAGCAAATATAG.. 30 0 1 3.00 3 2 1 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGT...................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGTTTAGGCAGAAGTAGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAA...................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
TATGACTCCATTCTGCAGAAGGCAAGCTTA.............................................................................................................................. 30 1 1 3.00 3 2 0 1 0 0 0
.................................................TAGGACATGTGGGTTAGGTAGAAGTAGA............................................................................... 28 1 1 3.00 3 2 0 1 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAGGTAGA............................................................................... 28 1 1 3.00 3 3 0 0 0 0 0
..................................................AGGACATGTGGGTTAGGCAGAAGTAGAGG............................................................................. 29 0 1 2.00 2 1 0 0 0 1 0
.........................................................................................TATGATTGAGGGACTGGAATGCAGAGGGC...................................... 29 1 1 2.00 2 2 0 0 0 0 0
...................................................................................TGCAACTATGACTGAGGGACTGGAA................................................ 25 0 1 2.00 2 1 0 1 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTATT............................................................................... 28 2 1 2.00 2 1 1 0 0 0 0
.........................................................................................TATGAGTGAGGGACTGGAATGCAGAGGG....................................... 28 1 1 2.00 2 2 0 0 0 0 0
....ACTCCATTCTGCAGAAGGCAAGCTTTAAGG.......................................................................................................................... 30 0 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAG...................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0
.......................................................................AGTAGAGGATCCTGCAACTATGACTGA.......................................................... 27 0 1 2.00 2 2 0 0 0 0 0
.................................................................................................AGGGACTGGAATGCAGAGGGCCCCT.................................. 25 0 1 2.00 2 2 0 0 0 0 0
.....................................................................GAAGTAGAGGATCCTGCAACTATGACA............................................................ 27 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGT...................................... 27 1 1 2.00 2 2 0 0 0 0 0
..........................................AAAGTTCTAGGACATGTGGGTTAGGCAGAA.................................................................................... 30 0 1 2.00 2 0 2 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAGTAT................................................................................ 29 1 1 2.00 2 2 0 0 0 0 0
......................................................................AAGTAGAGGATCCTGCAACTATGACT............................................................ 26 0 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGCTTAGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGCCATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAA.................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0
TATGACTCCATTCTGCAGAAGGCA.................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
...................................................................................TGCAACTATGACTGAGGGACTGGAATGCAA........................................... 30 1 1 2.00 2 0 0 1 1 0 0
...................................................................CAGAAGTAGAGGATCCTGCAACTATGA.............................................................. 27 0 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGTT.............................................................................. 29 2 1 2.00 2 2 0 0 0 0 0
.................................................CAGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 1 0 0 1 0 0
.............................TAAGGAGAGGGAGAAAGTTCTAGGACATT.................................................................................................. 29 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCATT................................................................... 26 2 1 2.00 2 0 2 0 0 0 0
.................................................TAGGGCATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 1 0 1 0 0 0
........................................AGAAACTTCTAGGACATGTGGGTTAGGCA....................................................................................... 29 1 1 2.00 2 2 0 0 0 0 0
...................................................................CAGAAGTAGAGGATCCTGCAACTATGAC............................................................. 28 0 1 2.00 2 2 0 0 0 0 0
.........................................GAAGGTTCTAGGACATGTGGGTTAGGCA....................................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
......................................................................AAGTAGAGGATCCTGCAACTATGAC............................................................. 25 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAA......................................... 26 1 1 2.00 2 2 0 0 0 0 0
............................................AGTTCTAGGACATGTGGGTTAGGCAGA..................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0
..............................................TTCTAGGACATGTGGGTTATGCAGAAGT.................................................................................. 28 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTAGC............................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................TCATTATTAAGTGGAATAGCAAATATAGG. 29 0 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCACAAGTAGA............................................................................... 28 1 1 2.00 2 2 0 0 0 0 0
.........................................................................TAGAGGATCCTGCAACTATGACTGAGGGA...................................................... 29 0 1 2.00 2 1 0 0 1 0 0
..........................................AAAGTTCTAGGACATGTGGGTTAGGCAGT..................................................................................... 29 1 1 2.00 2 2 0 0 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGA......................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGA....................................... 26 1 1 2.00 2 2 0 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGA........................................ 27 1 1 2.00 2 2 0 0 0 0 0
.................................................TCGGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 1 0 1 0 0 0
...........................................AAGTTCTAGGACATGTGGGTTAGGCAGA..................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
.............................................................GTTAGGCAGAAGTAGAGGATCCTGCAAC................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
............................TTAAGGAGAGGGAGAAAGTTCTAGGACA.................................................................................................... 28 0 1 2.00 2 1 0 0 1 0 0
.................................................TAGGACATGTGGGTTAGTCAGAAGTAG................................................................................ 27 1 1 2.00 2 1 1 0 0 0 0
TATGACTCCATTCTGCAGAAGGCAAGCTTATC............................................................................................................................ 32 3 1 2.00 2 0 0 0 0 0 2
..TGACTCCATTGTGCAGAAGGCAAGCTTTT............................................................................................................................. 29 2 1 2.00 2 2 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAACTATT............................................................... 30 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTTGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 1 0 1 0 0 0
...............................................TCTAGTACATGTGGGTTAGGCAGAAGTAGA............................................................................... 30 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGTCAGAAGTAGAG.............................................................................. 29 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTGGGCAGAAGTAGA............................................................................... 28 1 1 2.00 2 1 0 1 0 0 0
..........................................AAAGTTCTAGGACATGTGGGTTAGGCA....................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGG...................................... 29 1 1 2.00 2 1 0 1 0 0 0
TATGACTCCATTCTGCCGAAGGCAAGCTTT.............................................................................................................................. 30 1 1 2.00 2 2 0 0 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGAGAGT..................................................................................................................... 30 1 1 2.00 2 1 1 0 0 0 0
.......................................................................AGTAGAGGATCCTGCAACTATGAC............................................................. 24 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................................TGGAATGCAGAGGGCCCCTGTTCTCATT......................... 28 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGA...................................... 27 1 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGT..................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
TATGACTCCAGTCTGCAGAAGGCAAGCTT............................................................................................................................... 29 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAG......................................... 24 0 1 2.00 2 2 0 0 0 0 0
TATGACTCCATTCTGCAGAAGGCCAGCTT............................................................................................................................... 29 1 1 2.00 2 2 0 0 0 0 0
..........................................................TGGGTTAGGCAGAAGTAGAGGATCCTGCAA.................................................................... 30 0 1 2.00 2 1 0 1 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGAG........................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGTT................................................................................. 26 1 1 2.00 2 1 1 0 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGGAGAGG..................................................................................................................... 30 0 1 2.00 2 2 0 0 0 0 0
............................................AGTTCTAGGACATGTGGGTTAGGCAGAA.................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................TATGACTGAGGGACTGGAATGCAGAGGGCA..................................... 30 1 1 2.00 2 2 0 0 0 0 0
...............................................................TAGGCCGAAGTAGAGGATCCTGCAACTAT................................................................ 29 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................ACTATGACTGAGGGACTGGAATGCAGAG......................................... 28 0 1 2.00 2 2 0 0 0 0 0
..............................................................TTAGGCAGAAGTAGAGGATCCTGCAAC................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAGTT................................................................................. 29 1 1 2.00 2 1 0 1 0 0 0
.........................................................................................TATGACTGAGGGACCGGAATGCAGAGGGT...................................... 29 2 1 1.00 1 0 0 1 0 0 0
.................................................TAAGACATGTGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAGTAT................................................................................ 30 1 1 1.00 1 1 0 0 0 0 0
..TGACTCCATTCTGCAGAAGGCCAGCTTTA............................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
...............................................TCTAGTACATGTGGGTTAGGCAGAAGTAGT............................................................................... 30 2 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGGTCCTGCAACTA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
TATGACTCCAGTCTGCAGAAGGCAAGCTTT.............................................................................................................................. 30 1 1 1.00 1 1 0 0 0 0 0
..........................................................................AGAGGATCCTGCAACTATGACTGAGGGAC..................................................... 29 0 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCCGCAACTA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
.......CCATTCTGCAGAAGGCAAGCTTTAAGGAGA....................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................TATGACTGAGCGACTGGAATGCAGAGGGC...................................... 29 1 1 1.00 1 1 0 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCAGAAG................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
............................TTAAGGAGAGGGAGAAAGTTCTAGGACAT................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
..................................................AGGACATGTGGGTTAGGCAGAAGTT................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACCTTTGGGTTAGGCAGAAGTAGA............................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAATTAGAG.............................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGTCAGAA.................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TGAATGAGGGACTGGAATGCAGAG......................................... 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGTCCC................................... 30 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................ACTATGACTGAGGGACTGGAATGCAGA.......................................... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGCGGGTTAGGCAGAAGTAGA............................................................................... 28 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................TATGACTGAGGTACTGGAATGCAGAGGGC...................................... 29 1 1 1.00 1 1 0 0 0 0 0
TATGACCCCATTCTGCAGAAGGCAAGCTT............................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
TATGACTCCACTCTGCAGAAGGCAAGCT................................................................................................................................ 28 1 1 1.00 1 0 0 0 1 0 0
...............................................................TAGGCTGAAGTAGAGGATCCTGCAACTAT................................................................ 29 1 1 1.00 1 1 0 0 0 0 0
..........................................................TGGGTTAGGCAGAAGTAGAGG............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCCGAAGTAGAGGATCCTGCAAC................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCAGAAGCAGAGGATCCTGCAACTA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
...........................TTTAAGGAGAAGGAGAAAGTTCTAGGACA.................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
..................AAGGCAAGCTTTAAGGAGAGGGAGAAA............................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCAGAAGTAGCGGATCCTGCAACTAT................................................................ 29 1 1 1.00 1 1 0 0 0 0 0
..................................................................................CTGCAACTATGACTGAGGGACTGGAA................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.................................................TAGTACATATGGGTTAGGCAGAAGTAGA............................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
.................................................TAGGAGATGTGGGTTAGGCAGAAGTAG................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TCTCATTATTAAGTGGAATAGCAAATA..... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................TAGTACATGTGGGTTAGGCAGAAGTAT................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAGGTAGAA.............................................................................. 29 2 1 1.00 1 0 0 1 0 0 0
...............................................TCTAGGACATGTGGGTTAGGCGGAAGTA................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
TATGACTCCATTCTGCAGAATGCAAGATTT.............................................................................................................................. 30 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGACTGAGGGACTTGAATGCAGAGGGCCCC................................... 30 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGCCAGAAGTAGA............................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAATAGA............................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTCGGTTAGGCAGAAGTAGT............................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
...............................................TCTAGGACATGTGGGTTAGTCAGAAGTA................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
......................................................CATGTGGGTTAGGCAGAAGTAGAGGATC.......................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCAGAAA................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................ACTATGACTGAGGGACTGGAATGCAGAGG........................................ 29 0 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGGTTAGTCAGAAGAAGA............................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
.................................................TAGGACATGTCGGTTAAGCAGAAGTAGA............................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
...............................................TCTAGGACATGTTGGTTAGGCAGAAGTA................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
.TAGACTCCATTCTGCAGAAGGCAAGCTT............................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
TATGACTCCATTCTGCAGAAGG...................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.................................................TAGGACATGTGGGTTAGGCAGAAGGTGA............................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
................................................CTAGGACATGTGGGTTAGGCAGAAGTAG................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
...........................ATTAAGGAGAGGGAGAAAGTTCTAGGACA.................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
..TGATTCCATTCTGCAGAAGGCAAGCTTTA............................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCA....................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................TTTAAGGAGAGCGAGAAAGTTCTAGGACA.................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
TATGACTCCATTCTGCAGAAGTCAAGTTTT.............................................................................................................................. 30 2 1 1.00 1 1 0 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCCGCAACTATC............................................................... 30 2 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTAGGTTAGGCAGAAGTA................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................TCATTATTAAGTGGAATATCAAATATATGT 30 2 1 1.00 1 1 0 0 0 0 0
..................AAGGCCAGCTTTAAGGAGAGGGAGAA................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.................................................TAGGACATGTGGATTAGGCAGAAGTAGA............................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
.........ATTCTGCAGAAGGCAAGCTTTAAGTAT........................................................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0
................................................CTAGGACATGTGGGTTAGGCAGAAGTATA............................................................................... 29 1 1 1.00 1 0 0 0 1 0 0
..............................................TTCTAGGACATGTGGATTAGGCAGAAGTA................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
..............................................TTCTAGGACATGTGGGTTAGGCATT..................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
.....................................................................GAACTAGAGGATCCTGCAACTATGACTGA.......................................................... 29 1 1 1.00 1 1 0 0 0 0 0
...........................TTTAAGGAGAGGGAGAAAGTTCTACGACA.................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0
...............................................................TAGGCAGAAGTAGAGGATCCTGCAAT................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
..TGACTCCATTGTGCAGAAGGCAAGCTTTA............................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
.........................................GAAAGTTCTAGGACATGTGGGTTAGGCAT...................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGACTGAGGGACTGGAATGCAGAGGGCCTT................................... 30 2 1 1.00 1 0 0 0 1 0 0

Anti-sense strand reads

ATACTGAGGTAAGACGTCTTCCGTTCGAAATTCCTCTCCCTCTTTCAAGATCCTGTACACCCAATCCGTCTTCATCTCCTAGGACGTTGATACTGACTCCCTGACCTTACGTCTCCCGGGGACAAGAGTAATAATTCACCTTATCGTTTATATCCA

***********************************..(((.....(((((((........(((((...((..((((......))))..)).)))))......)))))))........))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis
.........................................................TTCCCAATCCGTCTTCATCTC.............................................................................. 21 2 5 0.20 1 1

Generated: 09/01/2015 at 12:15 PM