ID:

mml-mir-7171

Coordinate:

chr17:12711701-12711770 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-66.6 -66.6 -66.5

Sense Strand Reads

GCAGCAGAAGAGCACAGTTGAATGGCGTGGCTCCCAAGGCTGCCACGCTTCGAGATTCTAGGGGCTACCACGCACCTGTGTGCACAGAACAGGGTGTGTGGTGGCCCTTAGAATCTCTGCACTGGCAGCTGAGACTGCAGGTCTGGCTTCTGATGTCCCTTGCACTACAC

***********************************..((((((((.((...((((((((((((((((((((((((((.(((.......))))))))))))))))))))))))))))).))..))))))))....************************************
Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
SRR116842

seminal vesicle
..................................................CGAGATTCTAGGGGCTACCACG.................................................................................................. 22 0 1 2.00 2 2 0
.................................................TCGAGATTCTAGGGGCTACCACG.................................................................................................. 23 0 1 2.00 2 2 0
................................................TTCGAGATTCTAGGGGCTACCAA................................................................................................... 23 1 1 1.00 1 0 1
..................................................................................................TGGTGGCCCTTAGAATCTCTG................................................... 21 0 1 1.00 1 1 0

Anti-sense strand reads

CGTCGTCTTCTCGTGTCAACTTACCGCACCGAGGGTTCCGACGGTGCGAAGCTCTAAGATCCCCGATGGTGCGTGGACACACGTGTCTTGTCCCACACACCACCGGGAATCTTAGAGACGTGACCGTCGACTCTGACGTCCAGACCGAAGACTACAGGGAACGTGATGTG

************************************..((((((((.((...((((((((((((((((((((((((((.(((.......))))))))))))))))))))))))))))).))..))))))))....***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:14 PM