ID:

mml-mir-6827

 Coordinate:

chr2:155937943-155938002 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.9 -38.8 -38.8

Sense Strand Reads

AACCATCTTCCCAATATGCCTAGGAATGGGGCGACTCTGGGCTGCTCCGGGTGGGAACCATAAGGGTCTGTGCTGTCTCTGAGCACCGTCTCTTCTGTTTCCCAGGATCCTGCAGGCCCAGGTGCCGCCTGTGTTCCTCCAACAGCAGCAACAGTACCAG

***********************************((((((((((...(((((((((.((.(((((...(((((.......)))))...))))).)).))))))...))).))).)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis		 SRR116843

cortex		 SRR116840

epididymis		 SRR116842

seminal vesicle
..................................................GTGGGAACCATAAGGGTCTGTGCATC.................................................................................... 26 3 1 27.00 27 17 10 0 0 0
....................................................................................ACCGTCTCTTCTGTTTCCCAGTATC................................................... 25 1 1 2.00 2 0 2 0 0 0
.................................................GGTGGGAACCATAAGGGTCTGTGCATC.................................................................................... 27 3 1 2.00 2 1 1 0 0 0
.................................................GGTGGGAACCATAAGGGTCTGAA........................................................................................ 23 2 1 1.00 1 0 0 1 0 0
.....................................................................................CCGTCTCTTCTGTTTCCCAGA...................................................... 21 1 1 1.00 1 0 0 1 0 0
.................................................GGTGGGAACCATAAGGGTCTGT......................................................................................... 22 0 1 1.00 1 0 0 0 1 0
...................................................TGGGAACCATAAGGGTCTGTGC....................................................................................... 22 0 1 1.00 1 0 0 0 0 1
...................................................TGGGAACCATAAGGGTCTGTGCATC.................................................................................... 25 3 1 1.00 1 0 1 0 0 0

Anti-sense strand reads

TTGGTAGAAGGGTTATACGGATCCTTACCCCGCTGAGACCCGACGAGGCCCACCCTTGGTATTCCCAGACACGACAGAGACTCGTGGCAGAGAAGACAAAGGGTCCTAGGACGTCCGGGTCCACGGCGGACACAAGGAGGTTGTCGTCGTTGTCATGGTC

***********************************((((((((((...(((((((((.((.(((((...(((((.......)))))...))))).)).))))))...))).))).)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:19 PM