ID:

mml-mir-675

Coordinate:

chr14:1861015-1861087 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.9 -52.9 -52.9

Sense Strand Reads

GAGGCTGCAGGGGCTCGGCCTGCGGGCGCCGTTCCCACGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACACTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTGGCAGGCAGTACAGCATCCAGGGGAGTCAAGGGCATGGGGCG

********************************************...((((((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).)))).))))))....******************************************
Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
SRR116840

epididymis
SRR116841

prostate
SRR116843

cortex
SRR116845

epididymis
..............................................................................................CTGTATGCCCTCACCGCTCAGCATC...................................................... 25 2 1 8.00 8 7 0 0 0 1
...........................................................TGGTGCGGAGAGGGCCCACAGTG........................................................................................... 23 0 1 2.00 2 0 1 0 1 0
............................................................GGTGCGGAGAGGGCCCACAGTG........................................................................................... 22 0 1 1.00 1 0 0 1 0 0
...........................................................TGGTGCGGAGAGGGCCCA................................................................................................ 18 0 1 1.00 1 0 1 0 0 0
..............................................................................................CTGTATGCCCTCACCGCTCAGC......................................................... 22 0 1 1.00 1 0 1 0 0 0
..............................................................................................TTGTATGCCCTCACCGCTCAGCATC...................................................... 25 3 1 1.00 1 1 0 0 0 0
................................................................................................GTATGCCCTCACCGCTCAGCATC...................................................... 23 2 1 1.00 1 1 0 0 0 0
...............................................................................................TGTATGCCCTCACCGCTCAGCATC...................................................... 24 2 1 1.00 1 1 0 0 0 0
...........................................................TGGTGCGGAGAGGGCCCACAGTGT.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0
...............................................................................................TGTATTCCCTCACCGCTCAGCATC...................................................... 24 3 2 0.50 1 1 0 0 0 0
..............................................................................................CTGTATGCCCTCACCGCTCAGAAA....................................................... 24 3 2 0.50 1 0 1 0 0 0

Anti-sense strand reads

CTCCGACGTCCCCGAGCCGGACGCCCGCGGCAAGGGTGCTCCGTGACGCCGGGTCCCAGACCACGCCTCTCCCGGGTGTCACCTGAACCACTGTGACATACGGGAGTGGCGAGTCGGGGACCCCGACCGAACCGTCCGTCATGTCGTAGGTCCCCTCAGTTCCCGTACCCCGC

******************************************...((((((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).)))).))))))....********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:09 PM