ID:

mml-mir-670

 Coordinate:

chr14:28658820-28658908 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.1 -42.1 -42.0

Sense Strand Reads

GTCTGTCAAGTCTGAAGATGCCAGTTGAGACATGCCTCATCCAGTTTAGGGGTGGACCTGATGTCCCTGAGTGTATGTGGTGAACCTGAATTTGCCTTGGGTTTCCTCATATTCATTCAGGAGTGTCAGTTGCCCCTTCACGCGACGTTGGAGAGCGTTTCGGCAAGCAGGTGTCTACTCATTTATGGC

***********************************....((((((..((((((((..((((((..((((((((((((.((.((((((((.......)))))))))).))))..))))))))..))))))))))))))..)).......))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116839

testes		 SRR116841

prostate
.....................................................................................................TTTCCTCATATTCATTCAGGAGT................................................................. 23 0 1 7.00 7 4 1 2
.....................................................................................................TTTCCTCATATTCATTCAGGAG.................................................................. 22 0 1 2.00 2 2 0 0
.....................................................................................................TTTCCTCATATTCATTCAGGATTG................................................................ 24 1 1 1.00 1 0 1 0
.....................................................................................................TTTCCTCATATTCATTCAGTA................................................................... 21 1 1 1.00 1 1 0 0
........................................................................................................CCTCATATTCATTCAGGAGTGT............................................................... 22 0 1 1.00 1 1 0 0
.....................................................................................................TTTCCTCATATTCATTCATGAGTG................................................................ 24 1 1 1.00 1 1 0 0
.....................................................................................................TTTCCTCATATTCATTCATGAGT................................................................. 23 1 1 1.00 1 1 0 0
.....................................................................................................TTTCCTCATATTCATTCATGATT................................................................. 23 2 5 0.20 1 1 0 0

Anti-sense strand reads

CAGACAGTTCAGACTTCTACGGTCAACTCTGTACGGAGTAGGTCAAATCCCCACCTGGACTACAGGGACTCACATACACCACTTGGACTTAAACGGAACCCAAAGGAGTATAAGTAAGTCCTCACAGTCAACGGGGAAGTGCGCTGCAACCTCTCGCAAAGCCGTTCGTCCACAGATGAGTAAATACCG

***********************************....((((((..((((((((..((((((..((((((((((((.((.((((((((.......)))))))))).))))..))))))))..))))))))))))))..)).......))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
........................................................................................................................................................CTCGCGAAGCTGTTCGT.................... 17 2 20 0.10 2 2

Generated: 09/01/2015 at 12:09 PM