ID:mml-mir-668 |
Coordinate:chr7:164953688-164953753 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
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|
| -34.7 | -34.2 | -34.2 |
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ACTGCATCGTTGCTGCTGGGGAGAAGGCAGTGCCCTCAGCACTCCCCTAAGGTAAGTGCGCCTCGGGTGAGCATGCACTTAATGTGGGTGTATGTCACTCGGCTCGGCCCACTACCCAACGCTATCCCACCCATTCCTAACAGGACTCCCGAGAGGGGCGGCCACC
***********************************...............((((.(((.(((((((((((.((((((((((...))))))))))))))))))...))).)))))))...............*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR116843 cortex |
SRR116841 prostate |
SRR116842 seminal vesicle |
SRR116844 epididymis |
|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................ATGTCACTCGGCTCGGCCCACT..................................................... | 22 | 0 | 1 | 62.00 | 62 | 59 | 2 | 1 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGGCCCACT..................................................... | 23 | 0 | 1 | 17.00 | 17 | 17 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTAC................................................... | 24 | 0 | 1 | 12.00 | 12 | 11 | 0 | 1 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACT..................................................... | 21 | 0 | 1 | 6.00 | 6 | 6 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTA.................................................... | 23 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTACC.................................................. | 25 | 0 | 1 | 5.00 | 5 | 4 | 1 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTAC................................................... | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTACC.................................................. | 24 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTACCC................................................. | 25 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTAT................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGGCCCCCT..................................................... | 23 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTAA................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTA.................................................... | 22 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCCCT..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGTCTCGGCCCACA..................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGGCCCAC...................................................... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................TGTCACTTGGCTCGGCCCACT..................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCCCTACC.................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCA....................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCATT..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTACCCTC............................................... | 27 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTACCA................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTACT.................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTTGGCCCACT..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCACTAT................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .........................................................................................AAATGTCACTCGGCTCGGCCC........................................................ | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGGCCCACTAT................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACA..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGTCTCGGCCCCCT..................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCACTACCA................................................. | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................TGTCACTCGGCTCGGCCCCCTAC................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGACTCGGCCCACT..................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCAC...................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCTCT..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGTATCGGCCCACT..................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCGGCCCCCTA.................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................CATGTCACTCGGCTCGGCCCACTAC................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................ATGTCACTCGGCTCCGCCCACT..................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGTCCCACT..................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................TATGTCACTCGGCTCGGCCCCCC..................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
|
TGACGTAGCAACGACGACCCCTCTTCCGTCACGGGAGTCGTGAGGGGATTCCATTCACGCGGAGCCCACTCGTACGTGAATTACACCCACATACAGTGAGCCGAGCCGGGTGATGGGTTGCGATAGGGTGGGTAAGGATTGTCCTGAGGGCTCTCCCCGCCGGTGG
***********************************...............((((.(((.(((((((((((.((((((((((...))))))))))))))))))...))).)))))))...............*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 12:31 PM